RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 UBE2D1P51668 147 aa8.47□□□□□ -1.05
CLN6-217ENST00000636964 MUC4Q99102 2169 aa8.46□□□□□ -1.05
CLN6-217ENST00000636964 TCL1BO95988 128 aa8.46□□□□□ -1.05
CLN6-217ENST00000636964 C14orf178Q8N769 122 aaPredicted RBP8.46□□□□□ -1.05
CLN6-217ENST00000636964 NXT2Q9NPJ8 142 aaKnown RBP8.46□□□□□ -1.05
CLN6-217ENST00000636964 Q8N8P6 123 aa8.46□□□□□ -1.06
CLN6-217ENST00000636964 NRACQ8N912 160 aa8.46□□□□□ -1.06
CLN6-217ENST00000636964 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
CLN6-217ENST00000636964 NSD1Q96L73 2696 aaPredicted RBP8.46□□□□□ -1.06
CLN6-217ENST00000636964 SBSPONQ8IVN8 264 aa8.46□□□□□ -1.06
CLN6-217ENST00000636964 PRM2P04554 102 aa8.45□□□□□ -1.06
CLN6-217ENST00000636964 J3QQQ9 107 aa8.45□□□□□ -1.06
CLN6-217ENST00000636964 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
CLN6-217ENST00000636964 DSCR8Q96T75 97 aa8.45□□□□□ -1.06
CLN6-217ENST00000636964 MAP6D1Q9H9H5 199 aa8.45□□□□□ -1.06
CLN6-217ENST00000636964 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 LOC107984156A0A0G2JMH3 177 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 ARL17AQ8IVW1 177 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 ANKRD29Q8N6D5 301 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
CLN6-217ENST00000636964 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
CLN6-217ENST00000636964 A8MWV9 139 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 H3BMM0 161 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
CLN6-217ENST00000636964 PROK1P58294 105 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 MGPP08493 103 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 KRTAP10-3P60369 221 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 OXLD1Q5BKU9 147 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 Q8N1Y9 231 aa8.44□□□□□ -1.06
CLN6-217ENST00000636964 M0R2P5 195 aa8.43□□□□□ -1.06
CLN6-217ENST00000636964 TRACP01848 142 aa8.43□□□□□ -1.06
CLN6-217ENST00000636964 RBMY1A1P0DJD3 496 aaKnown RBP8.43□□□□□ -1.06
CLN6-217ENST00000636964 RBMY1CP0DJD4 496 aa8.43□□□□□ -1.06
CLN6-217ENST00000636964 RBMY1FQ15415 496 aaKnown RBP8.43□□□□□ -1.06
CLN6-217ENST00000636964 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
CLN6-217ENST00000636964 ZNF256Q9Y2P7 627 aaPredicted RBP8.43□□□□□ -1.06
CLN6-217ENST00000636964 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
CLN6-217ENST00000636964 ODF3Q96PU9 254 aa8.43□□□□□ -1.06
CLN6-217ENST00000636964 TP53TG1Q9Y2A0 90 aa8.43□□□□□ -1.06
CLN6-217ENST00000636964 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 ADARB2-AS1A8MUL3 147 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 OXTP01178 125 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 IGHV1OR15-1A0A075B7D0 117 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 A0A087WWL8 130 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
CLN6-217ENST00000636964 SCGB1C2P0DMR2 95 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 PLNP26678 52 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 LAGE3Q14657 143 aa8.42□□□□□ -1.06
CLN6-217ENST00000636964 F8VRH5 84 aa8.41□□□□□ -1.06
CLN6-217ENST00000636964 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
CLN6-217ENST00000636964 IGHV3-16A0A0C4DH30 117 aa8.41□□□□□ -1.06
CLN6-217ENST00000636964 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
CLN6-217ENST00000636964 NDUFA11Q86Y39 141 aa8.41□□□□□ -1.06
CLN6-217ENST00000636964 RPL39LQ96EH5 51 aaKnown RBP8.41□□□□□ -1.06
CLN6-217ENST00000636964 DPH3P1Q9H4G8 78 aa8.41□□□□□ -1.06
CLN6-217ENST00000636964 H7C1H1 209 aa8.4□□□□□ -1.06
CLN6-217ENST00000636964 NEXN-AS1Q8NBZ9 246 aa8.4□□□□□ -1.06
CLN6-217ENST00000636964 BRK1Q8WUW1 75 aa8.4□□□□□ -1.06
CLN6-217ENST00000636964 TRGV11A0A075B6L2 103 aa8.4□□□□□ -1.07
CLN6-217ENST00000636964 MED14OSP0DP75 135 aa8.4□□□□□ -1.07
CLN6-217ENST00000636964 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.07
CLN6-217ENST00000636964 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 CFC1P0CG37 223 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 TRAV12-1A0A0B4J245 112 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 F5H697 171 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 WFDC10AQ9H1F0 79 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
CLN6-217ENST00000636964 TENM1Q9UKZ4 2725 aa8.38□□□□□ -1.07
CLN6-217ENST00000636964 F8P00451 2351 aa8.38□□□□□ -1.07
CLN6-217ENST00000636964 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 TMEM258P61165 79 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 LINC00315P59091 139 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 VWFP04275 2813 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 NXPH4O95158 308 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 ZNF56Q15929 161 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 ZNF876PQ49A33 203 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 LINC00482Q8N8I6 264 aa8.37□□□□□ -1.07
CLN6-217ENST00000636964 A0A0J9YY99 117 aa8.36□□□□□ -1.07
CLN6-217ENST00000636964 A8MTW9 85 aa8.36□□□□□ -1.07
CLN6-217ENST00000636964 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
CLN6-217ENST00000636964 TOMM6Q96B49 74 aa8.36□□□□□ -1.07
CLN6-217ENST00000636964 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
CLN6-217ENST00000636964 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
CLN6-217ENST00000636964 IGHV3-73A0A0B4J1V6 119 aa8.35□□□□□ -1.07
CLN6-217ENST00000636964 SUMO2P61956 95 aaKnown RBP8.35□□□□□ -1.07
CLN6-217ENST00000636964 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
CLN6-217ENST00000636964 SUMO4Q6EEV6 95 aa8.35□□□□□ -1.07
CLN6-217ENST00000636964 SCGB1D4Q6XE38 83 aa8.35□□□□□ -1.07
CLN6-217ENST00000636964 SPATA3Q8NHX4 192 aa8.35□□□□□ -1.07
CLN6-217ENST00000636964 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
CLN6-217ENST00000636964 SLC25A20O43772 301 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 COX7CP15954 63 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 HERVK_113P61574 105 aa8.34□□□□□ -1.07
CLN6-217ENST00000636964 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms