RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 CCL24O00175 119 aa11.55□□□□□ -0.56
CHRNA7-221ENST00000636898 ATXN8Q156A1 80 aa11.55□□□□□ -0.56
CHRNA7-221ENST00000636898 ANKRD29Q8N6D5 301 aa11.55□□□□□ -0.56
CHRNA7-221ENST00000636898 LINC01600Q96MT4 127 aa11.55□□□□□ -0.56
CHRNA7-221ENST00000636898 CDKN2A-AS1Q9UH64 79 aa11.55□□□□□ -0.56
CHRNA7-221ENST00000636898 TRGV1A0A0A0MS02 117 aa11.54□□□□□ -0.56
CHRNA7-221ENST00000636898 IFITM1P13164 125 aa11.54□□□□□ -0.56
CHRNA7-221ENST00000636898 FAM19A3Q7Z5A8 133 aa11.54□□□□□ -0.56
CHRNA7-221ENST00000636898 CSDC2Q9Y534 153 aaKnown RBP11.54□□□□□ -0.56
CHRNA7-221ENST00000636898 ZNF469Q96JG9 3925 aaPredicted RBP11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 C9JAW5 83 aa11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 NDUFA1O15239 70 aa11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 HERVK_113P63121 156 aa11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 RPL36AP83881 106 aaKnown RBP11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 DAZ2Q13117 558 aaKnown RBP11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 HIST2H2BDQ6DRA6 164 aa11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 RPL36ALQ969Q0 106 aaKnown RBP11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
CHRNA7-221ENST00000636898 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.57
CHRNA7-221ENST00000636898 A8MZ25 164 aa11.52□□□□□ -0.57
CHRNA7-221ENST00000636898 K7EQD1 137 aa11.52□□□□□ -0.57
CHRNA7-221ENST00000636898 TMEM101Q96IK0 257 aa11.52□□□□□ -0.57
CHRNA7-221ENST00000636898 CHD6Q8TD26 2715 aa11.52□□□□□ -0.57
CHRNA7-221ENST00000636898 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
CHRNA7-221ENST00000636898 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
CHRNA7-221ENST00000636898 TRIAP1O43715 76 aa11.51□□□□□ -0.57
CHRNA7-221ENST00000636898 CMC4P56277 68 aaPredicted RBP11.51□□□□□ -0.57
CHRNA7-221ENST00000636898 APCP25054 2843 aa11.51□□□□□ -0.57
CHRNA7-221ENST00000636898 LINC01620Q4KN68 170 aa11.51□□□□□ -0.57
CHRNA7-221ENST00000636898 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.51□□□□□ -0.57
CHRNA7-221ENST00000636898 LINC00242Q5T6M2 205 aa11.5□□□□□ -0.57
CHRNA7-221ENST00000636898 ICOSQ9Y6W8 199 aa11.5□□□□□ -0.57
CHRNA7-221ENST00000636898 A0A1W2PRX2 142 aa11.5□□□□□ -0.57
CHRNA7-221ENST00000636898 ESM1Q9NQ30 184 aa11.5□□□□□ -0.57
CHRNA7-221ENST00000636898 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
CHRNA7-221ENST00000636898 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
CHRNA7-221ENST00000636898 TMEM262E9PQX1 116 aa11.49□□□□□ -0.57
CHRNA7-221ENST00000636898 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
CHRNA7-221ENST00000636898 Q6ZTI0 123 aa11.49□□□□□ -0.57
CHRNA7-221ENST00000636898 EPG5Q9HCE0 2579 aa11.49□□□□□ -0.57
CHRNA7-221ENST00000636898 COX6CP09669 75 aa11.48□□□□□ -0.57
CHRNA7-221ENST00000636898 COX6A2Q02221 97 aa11.48□□□□□ -0.57
CHRNA7-221ENST00000636898 C11orf44Q8N8P7 122 aa11.48□□□□□ -0.57
CHRNA7-221ENST00000636898 WFDC11Q8NEX6 87 aa11.48□□□□□ -0.57
CHRNA7-221ENST00000636898 TRBV10-2A0A0K0K1G8 114 aa11.48□□□□□ -0.57
CHRNA7-221ENST00000636898 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
CHRNA7-221ENST00000636898 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
CHRNA7-221ENST00000636898 NTM-AS1Q6ZSK4 140 aa11.47□□□□□ -0.57
CHRNA7-221ENST00000636898 CITED2Q99967 270 aaPredicted RBP11.47□□□□□ -0.57
CHRNA7-221ENST00000636898 CIDEAO60543 219 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 GIG44P09565 113 aaPredicted RBP11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 C16orf74Q96GX8 76 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 C16orf95Q9H693 158 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 XGP55808 180 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 NPC2P61916 151 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 Q9H8V8 135 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 NOP10Q9NPE3 64 aaKnown RBP11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
CHRNA7-221ENST00000636898 A0A1B0GV72 72 aa11.44□□□□□ -0.58
CHRNA7-221ENST00000636898 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
CHRNA7-221ENST00000636898 MT-ATP8P03928 68 aa11.44□□□□□ -0.58
CHRNA7-221ENST00000636898 LINC01006Q8NI28 216 aa11.44□□□□□ -0.58
CHRNA7-221ENST00000636898 GAGE12JA6NER3 117 aa11.43□□□□□ -0.58
CHRNA7-221ENST00000636898 RNASE1P07998 156 aaKnown RBP11.43□□□□□ -0.58
CHRNA7-221ENST00000636898 GAGE4Q13068 117 aa11.43□□□□□ -0.58
CHRNA7-221ENST00000636898 GAGE5Q13069 117 aa11.43□□□□□ -0.58
CHRNA7-221ENST00000636898 LINC00308Q8TCZ7 52 aa11.43□□□□□ -0.58
CHRNA7-221ENST00000636898 NTN5Q8WTR8 489 aaPredicted RBP11.43□□□□□ -0.58
CHRNA7-221ENST00000636898 TRAV13-1A0A0B4J241 112 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 H3BT86 120 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 H7C423 109 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 DAND5Q8N907 189 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 NF1P21359 2839 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 TRBV6-4A0A1B0GX49 114 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 F5H768 121 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 LST1O00453 97 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 NDUFA7O95182 113 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 IGLV1-51P01701 117 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 ZNF625Q96I27 306 aaPredicted RBP11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 TMEM243Q9BU79 118 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 PPDPFQ9H3Y8 114 aa11.42□□□□□ -0.58
CHRNA7-221ENST00000636898 OVOL2Q9BRP0 275 aa11.41□□□□□ -0.58
CHRNA7-221ENST00000636898 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
CHRNA7-221ENST00000636898 NBPF19A0A087WUL8 3843 aa11.41□□□□□ -0.58
CHRNA7-221ENST00000636898 UBE2L6O14933 153 aa11.4□□□□□ -0.58
CHRNA7-221ENST00000636898 HERV-K104P63124 156 aa11.4□□□□□ -0.58
CHRNA7-221ENST00000636898 FLNAP21333 2647 aaKnown RBP11.4□□□□□ -0.58
CHRNA7-221ENST00000636898 C2orf82Q6UX34 121 aa11.4□□□□□ -0.58
CHRNA7-221ENST00000636898 TRGV2A0A075B6R0 118 aa11.39□□□□□ -0.59
CHRNA7-221ENST00000636898 KRTAP1-1Q07627 177 aa11.39□□□□□ -0.59
CHRNA7-221ENST00000636898 CSNK1G2-AS1Q8NCQ2 148 aa11.39□□□□□ -0.59
CHRNA7-221ENST00000636898 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
CHRNA7-221ENST00000636898 UBE2WQ96B02 151 aa11.39□□□□□ -0.59
CHRNA7-221ENST00000636898 TEX49A0A1B0GTD5 131 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms