RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 APOC3P02656 99 aa10.73□□□□□ -0.69
CACNA1A-229ENST00000636670 FCER1GP30273 86 aa10.73□□□□□ -0.69
CACNA1A-229ENST00000636670 REG3AQ06141 175 aa10.73□□□□□ -0.69
CACNA1A-229ENST00000636670 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
CACNA1A-229ENST00000636670 CLPSL2Q6UWE3 100 aa10.73□□□□□ -0.69
CACNA1A-229ENST00000636670 LINC00269Q8N2A0 174 aa10.73□□□□□ -0.69
CACNA1A-229ENST00000636670 PRELID3AQ96N28 172 aa10.73□□□□□ -0.69
CACNA1A-229ENST00000636670 FGF6P10767 208 aa10.72□□□□□ -0.69
CACNA1A-229ENST00000636670 TMEM136Q6ZRR5 245 aa10.72□□□□□ -0.69
CACNA1A-229ENST00000636670 HLA-DQA1P01909 254 aa10.71□□□□□ -0.69
CACNA1A-229ENST00000636670 COX19Q49B96 90 aa10.71□□□□□ -0.69
CACNA1A-229ENST00000636670 RNASEKQ6P5S7 137 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-229ENST00000636670 MRPL52Q86TS9 123 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-229ENST00000636670 TRAV8-4A0A0B4J246 113 aa10.7□□□□□ -0.7
CACNA1A-229ENST00000636670 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
CACNA1A-229ENST00000636670 SMAGPQ0VAQ4 97 aa10.7□□□□□ -0.7
CACNA1A-229ENST00000636670 Q8N814 137 aa10.7□□□□□ -0.7
CACNA1A-229ENST00000636670 NTN5Q8WTR8 489 aaPredicted RBP10.7□□□□□ -0.7
CACNA1A-229ENST00000636670 TMEM18Q96B42 140 aa10.69□□□□□ -0.7
CACNA1A-229ENST00000636670 TMEM101Q96IK0 257 aa10.69□□□□□ -0.7
CACNA1A-229ENST00000636670 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
CACNA1A-229ENST00000636670 PGPEP1Q9NXJ5 209 aa10.69□□□□□ -0.7
CACNA1A-229ENST00000636670 PRSS47A8MTI9 375 aa10.68□□□□□ -0.7
CACNA1A-229ENST00000636670 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-229ENST00000636670 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
CACNA1A-229ENST00000636670 MT-ND6P03923 174 aa10.68□□□□□ -0.7
CACNA1A-229ENST00000636670 WFDC2Q14508 124 aa10.68□□□□□ -0.7
CACNA1A-229ENST00000636670 OR5A1Q8NGJ0 315 aa10.68□□□□□ -0.7
CACNA1A-229ENST00000636670 GNB1LQ9BYB4 327 aa10.68□□□□□ -0.7
CACNA1A-229ENST00000636670 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
CACNA1A-229ENST00000636670 KRTAP26-1Q6PEX3 210 aa10.66□□□□□ -0.7
CACNA1A-229ENST00000636670 BAALCQ8WXS3 180 aa10.66□□□□□ -0.7
CACNA1A-229ENST00000636670 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
CACNA1A-229ENST00000636670 UBE2D4Q9Y2X8 147 aa10.66□□□□□ -0.7
CACNA1A-229ENST00000636670 CSDC2Q9Y534 153 aaKnown RBP10.66□□□□□ -0.7
CACNA1A-229ENST00000636670 IGLV10-54A0A075B6I4 117 aa10.65□□□□□ -0.7
CACNA1A-229ENST00000636670 LECT2O14960 151 aa10.65□□□□□ -0.7
CACNA1A-229ENST00000636670 C14orf177Q52M58 125 aa10.65□□□□□ -0.7
CACNA1A-229ENST00000636670 RAB5AP20339 215 aa10.64□□□□□ -0.71
CACNA1A-229ENST00000636670 IGLV5-52A0A0A0MRZ9 124 aa10.63□□□□□ -0.71
CACNA1A-229ENST00000636670 K7EMI3 77 aa10.63□□□□□ -0.71
CACNA1A-229ENST00000636670 DGAT2L7PQ6IED9 249 aa10.63□□□□□ -0.71
CACNA1A-229ENST00000636670 Q8N8P6 123 aa10.63□□□□□ -0.71
CACNA1A-229ENST00000636670 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-229ENST00000636670 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
CACNA1A-229ENST00000636670 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
CACNA1A-229ENST00000636670 ZNF664Q8N3J9 261 aa10.62□□□□□ -0.71
CACNA1A-229ENST00000636670 MRPL18Q9H0U6 180 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-229ENST00000636670 SPANXA1Q9NS26 97 aa10.62□□□□□ -0.71
CACNA1A-229ENST00000636670 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 LOC389332A0A1B0GUA5 103 aa10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 USP17L23D6RBM5 183 aa10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 KIAA1644Q3SXP7 199 aa10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 Q6ZUT4 128 aa10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 SLC7A5P1Q8MH63 180 aa10.61□□□□□ -0.71
CACNA1A-229ENST00000636670 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-229ENST00000636670 ORMDL2Q53FV1 153 aa10.6□□□□□ -0.71
CACNA1A-229ENST00000636670 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-229ENST00000636670 LINC00959A0A1B0GUT2 108 aa10.59□□□□□ -0.71
CACNA1A-229ENST00000636670 GCSHP23434 173 aa10.59□□□□□ -0.71
CACNA1A-229ENST00000636670 ALKBH7Q9BT30 221 aaPredicted RBP10.59□□□□□ -0.71
CACNA1A-229ENST00000636670 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 CCL25O15444 150 aa10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 IFI27P40305 119 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 SS18Q15532 418 aa10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 RNF213Q63HN8 5207 aa10.58□□□□□ -0.72
CACNA1A-229ENST00000636670 KRTAP10-1P60331 282 aa10.57□□□□□ -0.72
CACNA1A-229ENST00000636670 CYSLTR1Q9Y271 337 aa10.57□□□□□ -0.72
CACNA1A-229ENST00000636670 PYGO1Q9Y3Y4 419 aa10.57□□□□□ -0.72
CACNA1A-229ENST00000636670 FOXI1Q12951 378 aa10.56□□□□□ -0.72
CACNA1A-229ENST00000636670 RNASE13Q5GAN3 156 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-229ENST00000636670 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
CACNA1A-229ENST00000636670 TRAPPC1Q9Y5R8 145 aa10.56□□□□□ -0.72
CACNA1A-229ENST00000636670 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
CACNA1A-229ENST00000636670 G0S2P27469 103 aa10.55□□□□□ -0.72
CACNA1A-229ENST00000636670 XCL1P47992 114 aa10.55□□□□□ -0.72
CACNA1A-229ENST00000636670 SMCO4Q9NRQ5 59 aa10.55□□□□□ -0.72
CACNA1A-229ENST00000636670 PRSS1P07477 247 aa10.54□□□□□ -0.72
CACNA1A-229ENST00000636670 NPSP0C0P6 89 aa10.54□□□□□ -0.72
CACNA1A-229ENST00000636670 CFAP161Q6P656 301 aa10.54□□□□□ -0.72
CACNA1A-229ENST00000636670 CD164L2Q6UWJ8 174 aa10.54□□□□□ -0.72
CACNA1A-229ENST00000636670 CBLN2Q8IUK8 224 aa10.54□□□□□ -0.72
CACNA1A-229ENST00000636670 C15orf56Q8N910 161 aa10.54□□□□□ -0.72
CACNA1A-229ENST00000636670 FAM104AQ969W3 186 aa10.54□□□□□ -0.72
CACNA1A-229ENST00000636670 IGLV4-3A0A075B6K6 122 aa10.53□□□□□ -0.72
CACNA1A-229ENST00000636670 LINC01546A6NGU7 62 aa10.53□□□□□ -0.72
CACNA1A-229ENST00000636670 PRSS3P2Q8NHM4 247 aa10.53□□□□□ -0.72
CACNA1A-229ENST00000636670 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
CACNA1A-229ENST00000636670 TRAV13-1A0A0B4J241 112 aa10.52□□□□□ -0.73
CACNA1A-229ENST00000636670 hDV102S1A0JD36 115 aa10.52□□□□□ -0.73
CACNA1A-229ENST00000636670 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
CACNA1A-229ENST00000636670 IFITM10A6NMD0 228 aa10.52□□□□□ -0.73
CACNA1A-229ENST00000636670 GVQW2A0A096LPI5 108 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-229ENST00000636670 CNBPP62633 177 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-229ENST00000636670 FA2HQ7L5A8 372 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms