RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 UBE2D4Q9Y2X8 147 aa10.16□□□□□ -0.78
CACNA1A-228ENST00000636610 TRBV20-1A0A075B6N2 111 aa10.16□□□□□ -0.78
CACNA1A-228ENST00000636610 LINC00694P0DN24 101 aa10.16□□□□□ -0.78
CACNA1A-228ENST00000636610 TMEM89A2RUT3 159 aa10.15□□□□□ -0.78
CACNA1A-228ENST00000636610 CR1P17927 2039 aa10.15□□□□□ -0.79
CACNA1A-228ENST00000636610 IGHV1-58A0A0C4DH39 117 aa10.15□□□□□ -0.79
CACNA1A-228ENST00000636610 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.79
CACNA1A-228ENST00000636610 LITAFQ99732 161 aa10.15□□□□□ -0.79
CACNA1A-228ENST00000636610 UBR5O95071 2799 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-228ENST00000636610 VSIG2Q96IQ7 327 aa10.14□□□□□ -0.79
CACNA1A-228ENST00000636610 DSCR9P59020 149 aa10.14□□□□□ -0.79
CACNA1A-228ENST00000636610 Q6ZTI0 123 aa10.14□□□□□ -0.79
CACNA1A-228ENST00000636610 GAGE12JA6NER3 117 aa10.13□□□□□ -0.79
CACNA1A-228ENST00000636610 GAGE4Q13068 117 aa10.13□□□□□ -0.79
CACNA1A-228ENST00000636610 GAGE5Q13069 117 aa10.13□□□□□ -0.79
CACNA1A-228ENST00000636610 DEFB114Q30KQ6 69 aa10.13□□□□□ -0.79
CACNA1A-228ENST00000636610 C11orf72Q8NBR9 251 aa10.13□□□□□ -0.79
CACNA1A-228ENST00000636610 LINC01620Q4KN68 170 aa10.12□□□□□ -0.79
CACNA1A-228ENST00000636610 STHQ8IWL8 128 aa10.12□□□□□ -0.79
CACNA1A-228ENST00000636610 PEMTQ9UBM1 199 aa10.12□□□□□ -0.79
CACNA1A-228ENST00000636610 CRYBA4P53673 196 aa10.12□□□□□ -0.79
CACNA1A-228ENST00000636610 ODF3L2Q3SX64 289 aa10.12□□□□□ -0.79
CACNA1A-228ENST00000636610 Q9H8V8 135 aa10.12□□□□□ -0.79
CACNA1A-228ENST00000636610 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-228ENST00000636610 A0A1B0GV72 72 aa10.11□□□□□ -0.79
CACNA1A-228ENST00000636610 INSP01308 110 aa10.11□□□□□ -0.79
CACNA1A-228ENST00000636610 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-228ENST00000636610 RPL13AP40429 203 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-228ENST00000636610 ATP6V0E2Q8NHE4 81 aa10.11□□□□□ -0.79
CACNA1A-228ENST00000636610 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
CACNA1A-228ENST00000636610 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
CACNA1A-228ENST00000636610 J3QLI3 93 aa10.1□□□□□ -0.79
CACNA1A-228ENST00000636610 ATXN8Q156A1 80 aa10.1□□□□□ -0.79
CACNA1A-228ENST00000636610 PYGO1Q9Y3Y4 419 aa10.1□□□□□ -0.79
CACNA1A-228ENST00000636610 ICOSQ9Y6W8 199 aa10.1□□□□□ -0.79
CACNA1A-228ENST00000636610 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-228ENST00000636610 TRAV26-1A0A087WT03 109 aa10.09□□□□□ -0.79
CACNA1A-228ENST00000636610 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
CACNA1A-228ENST00000636610 CRLF1O75462 422 aa10.09□□□□□ -0.79
CACNA1A-228ENST00000636610 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
CACNA1A-228ENST00000636610 C1orf158Q8N1D5 194 aa10.09□□□□□ -0.79
CACNA1A-228ENST00000636610 FASNP49327 2511 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-228ENST00000636610 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
CACNA1A-228ENST00000636610 WFDC11Q8NEX6 87 aa10.08□□□□□ -0.8
CACNA1A-228ENST00000636610 MIAQ16674 131 aa10.08□□□□□ -0.8
CACNA1A-228ENST00000636610 HELZ2Q9BYK8 2649 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-228ENST00000636610 TENM4Q6N022 2769 aa10.08□□□□□ -0.8
CACNA1A-228ENST00000636610 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 SPANXA1Q9NS26 97 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 GAGE7O76087 117 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 VWFP04275 2813 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 TRAV4A0A0B4J268 109 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 SCGB1A1P11684 91 aa10.07□□□□□ -0.8
CACNA1A-228ENST00000636610 HECTD1Q9ULT8 2610 aa10.06□□□□□ -0.8
CACNA1A-228ENST00000636610 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
CACNA1A-228ENST00000636610 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
CACNA1A-228ENST00000636610 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
CACNA1A-228ENST00000636610 RNF183Q96D59 192 aa10.06□□□□□ -0.8
CACNA1A-228ENST00000636610 DEFB113Q30KQ7 82 aa10.06□□□□□ -0.8
CACNA1A-228ENST00000636610 CITED2Q99967 270 aaPredicted RBP10.06□□□□□ -0.8
CACNA1A-228ENST00000636610 H7C423 109 aa10.05□□□□□ -0.8
CACNA1A-228ENST00000636610 FSHBP01225 129 aa10.05□□□□□ -0.8
CACNA1A-228ENST00000636610 PIK3CD-AS1Q5SR53 167 aa10.05□□□□□ -0.8
CACNA1A-228ENST00000636610 PRIMA1Q86XR5 153 aa10.05□□□□□ -0.8
CACNA1A-228ENST00000636610 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
CACNA1A-228ENST00000636610 TTC32Q5I0X7 151 aa10.05□□□□□ -0.8
CACNA1A-228ENST00000636610 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
CACNA1A-228ENST00000636610 COX6CP09669 75 aa10.04□□□□□ -0.8
CACNA1A-228ENST00000636610 Q8N2B8 174 aa10.04□□□□□ -0.8
CACNA1A-228ENST00000636610 CCL24O00175 119 aa10.04□□□□□ -0.8
CACNA1A-228ENST00000636610 RS1O15537 224 aa10.04□□□□□ -0.8
CACNA1A-228ENST00000636610 RNF152Q8N8N0 203 aa10.04□□□□□ -0.8
CACNA1A-228ENST00000636610 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-228ENST00000636610 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
CACNA1A-228ENST00000636610 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 DNAJC9-AS1A6NH13 148 aa10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 RPL36AP83881 106 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 SOSTDC1Q6X4U4 206 aa10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 TEX29Q8N6K0 151 aa10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 RPL36ALQ969Q0 106 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 UBE2WQ96B02 151 aa10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 ANAPC13Q9BS18 74 aa10.03□□□□□ -0.8
CACNA1A-228ENST00000636610 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.8
CACNA1A-228ENST00000636610 TRBV10-2A0A0K0K1G8 114 aa10.02□□□□□ -0.8
CACNA1A-228ENST00000636610 GAGE6Q13070 117 aa10.02□□□□□ -0.8
CACNA1A-228ENST00000636610 SNCGO76070 127 aa10.02□□□□□ -0.81
CACNA1A-228ENST00000636610 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
CACNA1A-228ENST00000636610 CIRBPQ14011 172 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-228ENST00000636610 SPANXDQ9BXN6 97 aa10.01□□□□□ -0.81
CACNA1A-228ENST00000636610 SPANXCQ9NY87 97 aa10.01□□□□□ -0.81
CACNA1A-228ENST00000636610 K7EQD1 137 aa10.01□□□□□ -0.81
CACNA1A-228ENST00000636610 BEAN1Q3B7T3 259 aa10.01□□□□□ -0.81
CACNA1A-228ENST00000636610 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
CACNA1A-228ENST00000636610 UBE2L6O14933 153 aa10□□□□□ -0.81
CACNA1A-228ENST00000636610 C15orf53Q8NAA6 179 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms