RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
COL11A1-211ENST00000635193 DAZAP2Q15038 168 aaPredicted RBP8.72□□□□□ -1.01
COL11A1-211ENST00000635193 KLK12Q9UKR0 248 aa8.72□□□□□ -1.01
COL11A1-211ENST00000635193 LY6LH3BQJ8 138 aa8.71□□□□□ -1.01
COL11A1-211ENST00000635193 C22orf34Q6ZV56 151 aa8.71□□□□□ -1.01
COL11A1-211ENST00000635193 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.01
COL11A1-211ENST00000635193 IGKV4-1P06312 121 aa8.71□□□□□ -1.01
COL11A1-211ENST00000635193 K7EQG2 157 aa8.71□□□□□ -1.02
COL11A1-211ENST00000635193 Q6ZTI0 123 aa8.71□□□□□ -1.02
COL11A1-211ENST00000635193 URB1-AS1Q96HZ7 61 aa8.71□□□□□ -1.02
COL11A1-211ENST00000635193 TRBV27A0A0K0K1C4 114 aa8.7□□□□□ -1.02
COL11A1-211ENST00000635193 A6NED7 52 aa8.7□□□□□ -1.02
COL11A1-211ENST00000635193 PRO0255Q9UI72 69 aa8.7□□□□□ -1.02
COL11A1-211ENST00000635193 PCDH15Q96QU1 1955 aa8.7□□□□□ -1.02
COL11A1-211ENST00000635193 NRGNQ92686 78 aa8.7□□□□□ -1.02
COL11A1-211ENST00000635193 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
COL11A1-211ENST00000635193 KIAA1549Q9HCM3 1950 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 A8MZ25 164 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 LMO4P61968 165 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 PRO3102Q9H379 93 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 DEFB4AO15263 64 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 UBE2AP49459 152 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 EBI3Q14213 229 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 PYGO1Q9Y3Y4 419 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 Q8NA96 180 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 GAS8-AS1O95177 125 aa8.69□□□□□ -1.02
COL11A1-211ENST00000635193 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 PLXNB1O43157 2135 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 DEFB135Q30KP9 77 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 C11orf21Q9P2W6 132 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 LTBP2Q14767 1821 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 FSTL3O95633 263 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 CCKP06307 115 aa8.68□□□□□ -1.02
COL11A1-211ENST00000635193 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
COL11A1-211ENST00000635193 TNFRSF13BO14836 293 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-211ENST00000635193 MIFP14174 115 aa8.67□□□□□ -1.02
COL11A1-211ENST00000635193 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
COL11A1-211ENST00000635193 LINC00269Q8N2A0 174 aa8.67□□□□□ -1.02
COL11A1-211ENST00000635193 IGF2RP11717 2491 aa8.67□□□□□ -1.02
COL11A1-211ENST00000635193 UBE2D1P51668 147 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 CCL18P55774 89 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 TSHBP01222 138 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 PROK1P58294 105 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 UBE2D3P61077 147 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 UBE2D2P62837 147 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 CRIP2P52943 208 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-211ENST00000635193 PRR4Q16378 134 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 PRR9Q5T870 116 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 CCDC168Q8NDH2 2452 aa8.66□□□□□ -1.02
COL11A1-211ENST00000635193 REG3AQ06141 175 aa8.65□□□□□ -1.02
COL11A1-211ENST00000635193 SMIM11BQ8TCY0 68 aa8.65□□□□□ -1.02
COL11A1-211ENST00000635193 WFDC10BQ8IUB3 73 aa8.65□□□□□ -1.03
COL11A1-211ENST00000635193 CNFNQ9BYD5 112 aa8.64□□□□□ -1.03
COL11A1-211ENST00000635193 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
COL11A1-211ENST00000635193 C3orf84H3BNL1 204 aa8.64□□□□□ -1.03
COL11A1-211ENST00000635193 KLK5Q9Y337 293 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-211ENST00000635193 HCFC1P51610 2035 aa8.64□□□□□ -1.03
COL11A1-211ENST00000635193 A0A087WVE0 104 aa8.64□□□□□ -1.03
COL11A1-211ENST00000635193 LOC107984640A0A0U1RRK4 108 aa8.64□□□□□ -1.03
COL11A1-211ENST00000635193 SOSTDC1Q6X4U4 206 aa8.64□□□□□ -1.03
COL11A1-211ENST00000635193 CHCHD10Q8WYQ3 142 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-211ENST00000635193 Q6ZQY7 126 aa8.63□□□□□ -1.03
COL11A1-211ENST00000635193 PMAIP1Q13794 54 aa8.63□□□□□ -1.03
COL11A1-211ENST00000635193 F8W735 103 aaPredicted RBP8.63□□□□□ -1.03
COL11A1-211ENST00000635193 C1orf158Q8N1D5 194 aa8.63□□□□□ -1.03
COL11A1-211ENST00000635193 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
COL11A1-211ENST00000635193 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
COL11A1-211ENST00000635193 ATG2AQ2TAZ0 1938 aa8.62□□□□□ -1.03
COL11A1-211ENST00000635193 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
COL11A1-211ENST00000635193 ANKHD1Q8IWZ3 2542 aaKnown RBP8.62□□□□□ -1.03
COL11A1-211ENST00000635193 DEFB114Q30KQ6 69 aa8.62□□□□□ -1.03
COL11A1-211ENST00000635193 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
COL11A1-211ENST00000635193 POM121L12Q8N7R1 296 aa8.61□□□□□ -1.03
COL11A1-211ENST00000635193 Q8N6K4 173 aa8.61□□□□□ -1.03
COL11A1-211ENST00000635193 PRR14LQ5THK1 2151 aa8.61□□□□□ -1.03
COL11A1-211ENST00000635193 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
COL11A1-211ENST00000635193 TRBV6-8A0A0A6YYG3 113 aa8.6□□□□□ -1.03
COL11A1-211ENST00000635193 KLLNB2CW77 178 aa8.6□□□□□ -1.03
COL11A1-211ENST00000635193 CDIP1Q9H305 208 aa8.6□□□□□ -1.03
COL11A1-211ENST00000635193 WNK1Q9H4A3 2382 aa8.6□□□□□ -1.03
COL11A1-211ENST00000635193 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
COL11A1-211ENST00000635193 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
COL11A1-211ENST00000635193 CASC2Q6XLA1 102 aa8.6□□□□□ -1.03
COL11A1-211ENST00000635193 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
COL11A1-211ENST00000635193 CRYGDP07320 174 aa8.59□□□□□ -1.03
COL11A1-211ENST00000635193 C9orf85Q96MD7 179 aa8.59□□□□□ -1.03
COL11A1-211ENST00000635193 B9D2Q9BPU9 175 aa8.59□□□□□ -1.03
COL11A1-211ENST00000635193 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
COL11A1-211ENST00000635193 MUC22E2RYF6 1773 aaPredicted RBP8.59□□□□□ -1.03
COL11A1-211ENST00000635193 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.04
COL11A1-211ENST00000635193 DNAJC9-AS1A6NH13 148 aa8.58□□□□□ -1.04
COL11A1-211ENST00000635193 WFDC13Q8IUB5 93 aa8.58□□□□□ -1.04
COL11A1-211ENST00000635193 RETNQ9HD89 108 aa8.58□□□□□ -1.04
COL11A1-211ENST00000635193 LRCOL1A6NCL2 159 aa8.58□□□□□ -1.04
COL11A1-211ENST00000635193 K7ERS5 55 aa8.58□□□□□ -1.04
COL11A1-211ENST00000635193 Q6YL49 198 aa8.58□□□□□ -1.04
COL11A1-211ENST00000635193 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms