RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 LINC01556Q5JQF7 62 aa7.91□□□□□ -1.14
CHRNA4-210ENST00000627869 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
CHRNA4-210ENST00000627869 CDPF1Q6NVV7 123 aa7.91□□□□□ -1.14
CHRNA4-210ENST00000627869 Q8N8P6 123 aa7.91□□□□□ -1.14
CHRNA4-210ENST00000627869 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
CHRNA4-210ENST00000627869 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
CHRNA4-210ENST00000627869 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
CHRNA4-210ENST00000627869 I3L3M4 83 aa7.9□□□□□ -1.14
CHRNA4-210ENST00000627869 K7EMI3 77 aa7.9□□□□□ -1.14
CHRNA4-210ENST00000627869 G0S2P27469 103 aa7.9□□□□□ -1.14
CHRNA4-210ENST00000627869 IQCJQ1A5X6 159 aa7.9□□□□□ -1.14
CHRNA4-210ENST00000627869 LELP1Q5T871 98 aa7.9□□□□□ -1.14
CHRNA4-210ENST00000627869 MAP1LC3AQ9H492 121 aa7.9□□□□□ -1.14
CHRNA4-210ENST00000627869 TRBV6-8A0A0A6YYG3 113 aa7.89□□□□□ -1.15
CHRNA4-210ENST00000627869 IFI27P40305 119 aaPredicted RBP7.89□□□□□ -1.15
CHRNA4-210ENST00000627869 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
CHRNA4-210ENST00000627869 CHCHD7Q9BUK0 85 aa7.89□□□□□ -1.15
CHRNA4-210ENST00000627869 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
CHRNA4-210ENST00000627869 IBA57-AS1B1ANH7 110 aa7.88□□□□□ -1.15
CHRNA4-210ENST00000627869 PSCAO43653 123 aa7.88□□□□□ -1.15
CHRNA4-210ENST00000627869 FUSP35637 526 aaKnown RBP eCLIP7.88□□□□□ -1.15
CHRNA4-210ENST00000627869 TMEM97Q5BJF2 176 aa7.88□□□□□ -1.15
CHRNA4-210ENST00000627869 A0A096LNJ9 63 aa7.87□□□□□ -1.15
CHRNA4-210ENST00000627869 IGHV3-30P01768 117 aa7.87□□□□□ -1.15
CHRNA4-210ENST00000627869 IGHV3-33P01772 117 aa7.87□□□□□ -1.15
CHRNA4-210ENST00000627869 IGHV3-30-3P0DP02 117 aa7.87□□□□□ -1.15
CHRNA4-210ENST00000627869 IGHV3-30-5P0DP03 117 aa7.87□□□□□ -1.15
CHRNA4-210ENST00000627869 PMCHP20382 165 aa7.87□□□□□ -1.15
CHRNA4-210ENST00000627869 LOC389332A0A1B0GUA5 103 aa7.86□□□□□ -1.15
CHRNA4-210ENST00000627869 NIT1Q86X76 327 aa7.86□□□□□ -1.15
CHRNA4-210ENST00000627869 FAM104AQ969W3 186 aa7.86□□□□□ -1.15
CHRNA4-210ENST00000627869 Q9HAA7 133 aa7.86□□□□□ -1.15
CHRNA4-210ENST00000627869 IGHV1-24A0A0C4DH33 117 aa7.85□□□□□ -1.15
CHRNA4-210ENST00000627869 C20orf203Q8NBC4 194 aa7.85□□□□□ -1.15
CHRNA4-210ENST00000627869 DEFB104AQ8WTQ1 72 aa7.85□□□□□ -1.15
CHRNA4-210ENST00000627869 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
CHRNA4-210ENST00000627869 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
CHRNA4-210ENST00000627869 TRBV25-1A0A075B6N4 114 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 C1orf196B1AJZ1 125 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 H7C423 109 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 NUPR1O60356 82 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 INAFM2P0DMQ5 153 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 LAGE3Q14657 143 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 ODF1Q14990 250 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 MRPL52Q86TS9 123 aaKnown RBP7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 PRSS3P2Q8NHM4 247 aa7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
CHRNA4-210ENST00000627869 LRCOL1A6NCL2 159 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 SERF1AO75920 110 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 GCSHP23434 173 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 AMTP48728 403 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 KRTAP10-1P60331 282 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 ORMDL2Q53FV1 153 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 C14orf144Q96I85 54 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 TMEM243Q9BU79 118 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 TM2D2Q9BX73 214 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 HMCN2Q8NDA2 5059 aa7.83□□□□□ -1.16
CHRNA4-210ENST00000627869 IGLV5-52A0A0A0MRZ9 124 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 TRAV8-3A0A0A6YYJ7 113 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 XGP55808 180 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 RAB5BP61020 215 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 AP5S1Q9NUS5 200 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 CSDC2Q9Y534 153 aaKnown RBP7.82□□□□□ -1.16
CHRNA4-210ENST00000627869 IGIPA6NJ69 53 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 H0Y8G0 127 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 FCER1GP30273 86 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 PDZD11Q5EBL8 140 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 FA2HQ7L5A8 372 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 Q8N3U1 123 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 Q8N814 137 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 PYGO1Q9Y3Y4 419 aa7.81□□□□□ -1.16
CHRNA4-210ENST00000627869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.8□□□□□ -1.16
CHRNA4-210ENST00000627869 IGKV2-29A2NJV5 120 aaPredicted RBP7.8□□□□□ -1.16
CHRNA4-210ENST00000627869 MPV17L2Q567V2 206 aa7.8□□□□□ -1.16
CHRNA4-210ENST00000627869 C2orf66Q6UXQ4 117 aa7.8□□□□□ -1.16
CHRNA4-210ENST00000627869 BAGE3Q86Y29 109 aa7.8□□□□□ -1.16
CHRNA4-210ENST00000627869 NPSP0C0P6 89 aa7.79□□□□□ -1.16
CHRNA4-210ENST00000627869 FGF6P10767 208 aa7.79□□□□□ -1.16
CHRNA4-210ENST00000627869 ZNF25P17030 456 aaPredicted RBP7.79□□□□□ -1.16
CHRNA4-210ENST00000627869 RBX1P62877 108 aa7.79□□□□□ -1.16
CHRNA4-210ENST00000627869 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 LINC01549A6NIU2 74 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 HBDP02042 147 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 PKIAP61925 76 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 MRPS36P82909 103 aaKnown RBP7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 GAGE6Q13070 117 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 RMI2Q96E14 147 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 CHCHD5Q9BSY4 110 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 CDC42SE2Q9NRR3 84 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 SPANXA1Q9NS26 97 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 PRR34Q9NV39 138 aa7.78□□□□□ -1.16
CHRNA4-210ENST00000627869 CYSLTR1Q9Y271 337 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms