RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 HLA-DQA1P01909 254 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 GIPP09681 153 aaPredicted RBP1.73□□□□□ -2.13
CDKL5-208ENST00000624953 HIST1H1EP10412 219 aaKnown RBP1.73□□□□□ -2.13
CDKL5-208ENST00000624953 S100A7P31151 101 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 RAB14P61106 215 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 CNBPP62633 177 aaKnown RBP1.73□□□□□ -2.13
CDKL5-208ENST00000624953 RPL19P84098 196 aaKnown RBP1.73□□□□□ -2.13
CDKL5-208ENST00000624953 PPP1R1AQ13522 171 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 C10orf113Q5VZT2 155 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 SPINK6Q6UWN8 80 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
CDKL5-208ENST00000624953 TCTE3Q8IZS6 198 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 CYB561D1Q8N8Q1 229 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 FXYD5Q96DB9 178 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 HIST1H4GQ99525 98 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 NMES1Q9C002 83 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 PSENENQ9NZ42 101 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 TMEM14CQ9P0S9 112 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 RBM12B-AS1Q9P1G2 102 aa1.73□□□□□ -2.13
CDKL5-208ENST00000624953 A0A096LNI7 61 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 A0A0U1RQV1 116 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 C7orf66A4D0T2 115 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 RBAKDNA6NC62 111 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 HMSDA8MTL9 139 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 COX7A2P2O60397 106 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 IFNA7P01567 189 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 OR10J4P0C629 311 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 MGST1P10620 155 aaKnown RBP1.72□□□□□ -2.13
CDKL5-208ENST00000624953 RAB5CP51148 216 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 RAB2AP61019 212 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 HBG1P69891 147 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 HBG2P69892 147 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 BAXQ07812 192 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 PDE6HQ13956 83 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 GUK1Q16774 197 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 TMEM78Q5T7P6 136 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 CLPSL2Q6UWE3 100 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 PP632Q6XCG6 107 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 TEX43Q6ZNM6 134 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 NTM-AS1Q6ZSK4 140 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 MIR17HGQ75NE6 70 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 STX12Q86Y82 276 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 C12orf45Q8N5I9 185 aaPredicted RBP1.72□□□□□ -2.13
CDKL5-208ENST00000624953 C15orf56Q8N910 161 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 OR2T35Q8NGX2 323 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 MRAP2Q96G30 205 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 ZC2HC1AQ96GY0 325 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 SMIM8Q96KF7 97 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 CIB3Q96Q77 187 aaPredicted RBP1.72□□□□□ -2.13
CDKL5-208ENST00000624953 PRADC1Q9BSG0 188 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 SSPOA2VEC9 5147 aa1.72□□□□□ -2.13
CDKL5-208ENST00000624953 IGLV10-54A0A075B6I4 117 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 BORCS7-ASMTA0A0B4J1R7 106 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 KANTRA0A1W2PQU2 76 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 C9orf170A2RU37 121 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 PLA2G10O15496 165 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 SFT2D2O95562 160 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 NBEAP1P0C6P0 100 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 RPS10P46783 165 aaKnown RBP1.71□□□□□ -2.14
CDKL5-208ENST00000624953 TAS2R30P59541 319 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 UBE2D3P61077 147 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 UBE2D2P62837 147 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 COX6A2Q02221 97 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 ZNF345Q14585 488 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 PRNTQ86SH4 94 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 GATD1Q8NB37 220 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 RMI2Q96E14 147 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 C2orf50Q96LR7 162 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 DPH3P1Q9H4G8 78 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 KCNIP2Q9NS61 270 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 SLC39A9Q9NUM3 307 aa1.71□□□□□ -2.14
CDKL5-208ENST00000624953 USH2AO75445 5202 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 IGHV3-64A0A075B6Q5 118 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 A0A087WWC5 75 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 IGHV3OR16-9A0A0B4J2B5 98 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 IGKV2-24A0A0C4DH68 120 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 UBE2L5PA0A1B0GUS4 154 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 IGSF23A1L1A6 192 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 UMAD1C9J7I0 102 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 CST7O76096 145 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 ANGP03950 147 aaKnown RBP1.7□□□□□ -2.14
CDKL5-208ENST00000624953 ESDP10768 282 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 TPT1P13693 172 aaKnown RBP1.7□□□□□ -2.14
CDKL5-208ENST00000624953 S100A1P23297 94 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 S100A11P31949 105 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 GNG5P63218 68 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 Q0VG73 95 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 PDZD11Q5EBL8 140 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 ZFP2Q6ZN57 461 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 SLC51BQ86UW2 128 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 LINC00269Q8N2A0 174 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 OR2G3Q8NGZ4 309 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 FMC1Q96HJ9 113 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 SEC22CQ9BRL7 303 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 CHCHD7Q9BUK0 85 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 GGACTQ9BVM4 153 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 MAP1LC3AQ9H492 121 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 SMDT1Q9H4I9 107 aa1.7□□□□□ -2.14
CDKL5-208ENST00000624953 TIMM9Q9Y5J7 89 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms