RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 MPV17LQ2QL34 196 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 SLC50A1Q9BRV3 221 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 MRPL35Q9NZE8 188 aaKnown RBP1.69□□□□□ -2.14
CPNE3-213ENST00000622183 BCORQ6W2J9 1755 aa1.69□□□□□ -2.14
CPNE3-213ENST00000622183 DDX60Q8IY21 1712 aaKnown RBP1.69□□□□□ -2.14
CPNE3-213ENST00000622183 MUC6Q6W4X9 2439 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 MUC22E2RYF6 1773 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-213ENST00000622183 IGHV1-24A0A0C4DH33 117 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 ZNF736B4DX44 427 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-213ENST00000622183 C3orf79P0CE67 100 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 SMIM13P0DJ93 91 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 MGST1P10620 155 aaKnown RBP1.68□□□□□ -2.14
CPNE3-213ENST00000622183 MIFP14174 115 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 EFNA4P52798 201 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 DSCR4P56555 118 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-213ENST00000622183 INSL4Q14641 139 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 TMEM170BQ5T4T1 132 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 SLC48A1Q6P1K1 146 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 UNQ6190/PRO20217Q6UXQ8 127 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 LINC00643Q86TS7 51 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 DEFB107AQ8IZN7 70 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 NHP2Q9NX24 153 aaKnown RBP1.68□□□□□ -2.14
CPNE3-213ENST00000622183 LRRC37A3O60309 1634 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 A0A0G2JMZ2 1700 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 LRRC37A2A6NM11 1700 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 LRRC37AA6NMS7 1700 aa1.68□□□□□ -2.14
CPNE3-213ENST00000622183 EML5Q05BV3 1969 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 KIAA1549Q9HCM3 1950 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 TIAM2Q8IVF5 1701 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 TRAV2A0A0B4J234 112 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 TRAV13-2A0A0B4J235 113 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 C2orf70A6NJV1 201 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 J3QLW9 94 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 BAALC-AS2P0C853 105 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 UBE2D3P61077 147 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 UBE2D2P62837 147 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 BLCAPP62952 87 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 RHOHQ15669 191 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 C10orf55Q5SWW7 151 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 LYPD5Q6UWN5 251 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 VMO1Q7Z5L0 202 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 FAM216BQ8N7L0 139 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 FAM213BQ8TBF2 198 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 SPTSSAQ969W0 71 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 LINC00467Q9BRT7 94 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 ZNF236Q9UL36 1845 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 UBR3Q6ZT12 1888 aa1.67□□□□□ -2.14
CPNE3-213ENST00000622183 TRBV7-3A0A075B6L6 115 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 FXYD6-FXYD2A0A087WZ82 144 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 A0A0G2JND7 137 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 PIRTP0C851 137 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 PIPP12273 146 aaPredicted RBP1.66□□□□□ -2.14
CPNE3-213ENST00000622183 FAUP35544 74 aaKnown RBP1.66□□□□□ -2.14
CPNE3-213ENST00000622183 PCBD1P61457 104 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 ESRGQ1W209 222 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 Q6ZSA8 131 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 CYP2G1PQ6ZSU1 146 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 NABP2Q9BQ15 211 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 CYP4F30PQ9H0H9 118 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 FXYD6Q9H0Q3 95 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 MANBALQ9NQG1 85 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 COL4A1P02462 1669 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 DLEC1Q9Y238 1755 aa1.66□□□□□ -2.14
CPNE3-213ENST00000622183 BRWD1Q9NSI6 2320 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 PIGBOS1A0A0B4J2F0 54 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 IGKV3D-7A0A0C4DH55 119 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 IGKV3OR2-268A0A0C4DH90 116 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 LOC285095A0A1B0GVY8 99 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 RNASE3P12724 160 aaKnown RBP1.65□□□□□ -2.15
CPNE3-213ENST00000622183 CKS2P33552 79 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 UBE2G1P62253 170 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 SPANXN1Q5VSR9 72 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 NDUFA11Q86Y39 141 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 SMIM4Q8WVI0 70 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 CLEC2BQ92478 149 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 FAM167A-AS1Q96KT0 104 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 CST11Q9H112 138 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 NXT2Q9NPJ8 142 aaKnown RBP1.65□□□□□ -2.15
CPNE3-213ENST00000622183 CR1P17927 2039 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 DOT1LQ8TEK3 1739 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 MYOFQ9NZM1 2061 aa1.65□□□□□ -2.15
CPNE3-213ENST00000622183 MUC4Q99102 2169 aa1.64□□□□□ -2.15
CPNE3-213ENST00000622183 TRBV7-1A0A0A6YYK4 115 aa1.64□□□□□ -2.15
CPNE3-213ENST00000622183 FXYD1O00168 92 aa1.64□□□□□ -2.15
CPNE3-213ENST00000622183 IGLV1-51P01701 117 aa1.64□□□□□ -2.15
CPNE3-213ENST00000622183 SSBP1Q04837 148 aaKnown RBP1.64□□□□□ -2.15
CPNE3-213ENST00000622183 CIRBPQ14011 172 aaKnown RBP1.64□□□□□ -2.15
CPNE3-213ENST00000622183 CHCHD1Q96BP2 118 aaKnown RBP1.64□□□□□ -2.15
CPNE3-213ENST00000622183 DYNLRB1Q9NP97 96 aa1.64□□□□□ -2.15
CPNE3-213ENST00000622183 LMO7Q8WWI1 1683 aa1.64□□□□□ -2.15
CPNE3-213ENST00000622183 PCDH15Q96QU1 1955 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 A0A087WSZ3 146 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 ERC2-IT1O76042 136 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 SMIM11AP58511 58 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 PDE6HQ13956 83 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-213ENST00000622183 Q8IYB0 196 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 TOMM5Q8N4H5 51 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 IFI27L1Q96BM0 104 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms