RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 FAM25EA8MYX2 175 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 SH2D1AO60880 128 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 NDUFB6O95139 128 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 SCGB1D2O95969 90 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 UBE2AP49459 152 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 AQP4P55087 323 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 KRTAP10-10P60014 251 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 LSM3P62310 102 aaKnown RBP1.24□□□□□ -2.21
CPNE3-211ENST00000621526 NHLH2Q02577 135 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 SPAG11BQ08648 103 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 SMAGPQ0VAQ4 97 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 CNPY1Q3B7I2 92 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 C10orf25Q5T742 122 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 SUMO4Q6EEV6 95 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 TEX261Q6UWH6 196 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 MRPL55Q7Z7F7 128 aaKnown RBP1.24□□□□□ -2.21
CPNE3-211ENST00000621526 LINC01551Q86U37 167 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 C3orf22Q8N5N4 141 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 OR10AG1Q8NH19 301 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 MCFD2Q8NI22 146 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 HIST1H2BAQ96A08 127 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 CNBD2Q96M20 576 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 LINC00167Q96N53 147 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 AP1S3Q96PC3 154 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 TMEM167BQ9NRX6 74 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 C6orf48Q9UBA6 75 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 ALG5Q9Y673 324 aa1.24□□□□□ -2.21
CPNE3-211ENST00000621526 IGHV3OR16-9A0A0B4J2B5 98 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 C20orf202A1L168 122 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 IGSF23A1L1A6 192 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 F2Z2F3 143 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 I3L3M4 83 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 MT1FP04733 61 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 S100A9P06702 114 aaKnown RBP1.23□□□□□ -2.21
CPNE3-211ENST00000621526 STAG3L2P0CL84 134 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 STAG3L3P0CL85 134 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 NCS1P62166 190 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 KIAA0087Q14695 138 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 MZT2BQ6NZ67 158 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 C5orf38Q86SI9 138 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 TOMM5Q8N4H5 51 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 Q8NBF4 154 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 THAP6Q8TBB0 222 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 SCGB1C1Q8TD33 95 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 MARVELD1Q9BSK0 173 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 VCX3BQ9H321 246 aa1.23□□□□□ -2.21
CPNE3-211ENST00000621526 LSM5Q9Y4Y9 91 aaKnown RBP1.23□□□□□ -2.21
CPNE3-211ENST00000621526 IGLV5-37A0A075B6J1 123 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.22□□□□□ -2.21
CPNE3-211ENST00000621526 TMSB15BA0A087X1C1 80 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 TRBV6-5A0A0K0K1A5 114 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 IGKV2-29A2NJV5 120 aaPredicted RBP1.22□□□□□ -2.21
CPNE3-211ENST00000621526 NAP1L6A6NFF2 107 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 RGS5O15539 181 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 CXorf1O96002 111 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 LTAP01374 205 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 IFNA1P01562 189 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 APCSP02743 223 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 TRGC1P0CF51 173 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 PMCHP20382 165 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 GCHFRP30047 84 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 UBE2G2P60604 165 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 NEDD8Q15843 81 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 FAM231DQ6ZW35 169 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 LINC01561Q8N1V8 128 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 C9orf62Q8N4C0 152 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 ORAOV1Q8WV07 137 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 FMC1Q96HJ9 113 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 TCEAL7Q9BRU2 100 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 FUNDC2Q9BWH2 189 aa1.22□□□□□ -2.21
CPNE3-211ENST00000621526 A0A087WXM4 84 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 TRAV13-1A0A0B4J241 112 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 TRBV27A0A0K0K1C4 114 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 MUC21A0A140T8X8 626 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 RAB19A4D1S5 217 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 SDHAF1A6NFY7 115 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 RPL37AP8A6NKH3 93 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 PEX7O00628 323 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 MBP02144 154 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 MGPP08493 103 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 IGLC6P0CF74 106 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 ARL14EPLP0DKL9 152 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 LGALS3P17931 250 aaKnown RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 FHITP49789 147 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 POLR2KP53803 58 aaKnown RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 FOXA3P55318 350 aaPredicted RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 SSTP61278 116 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 RPL37P61927 97 aaKnown RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 UBE2G1P62253 170 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 RPL32P62910 135 aaKnown RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 SERF2P84101 59 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 PNRC1Q12796 327 aaPredicted RBP1.21□□□□□ -2.22
CPNE3-211ENST00000621526 RAB32Q13637 225 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 Q6Q795 121 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 Q86TA4 180 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 CBLN2Q8IUK8 224 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 GATD1Q8NB37 220 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 RAB24Q969Q5 203 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 MRAP2Q96G30 205 aa1.21□□□□□ -2.22
CPNE3-211ENST00000621526 SPRR4Q96PI1 79 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms