RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 XAGE1AQ9HD64 81 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 MBD6Q96DN6 1003 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 KIAA1549LQ6ZVL6 1849 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 Q6JHZ5 121 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 SMR3AQ99954 134 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 NOTCH2Q04721 2471 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 FBXL19-AS1Q494R0 122 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
COL4A6-210ENST00000621266 CUL9Q8IWT3 2517 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 PLXNB3Q9ULL4 1909 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 TRBV10-1A0A0K0K1A3 114 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 ODF3L1Q8IXM7 274 aa7.42□□□□□ -1.22
COL4A6-210ENST00000621266 Q6ZS46 218 aa7.41□□□□□ -1.22
COL4A6-210ENST00000621266 LINC00526Q96FQ7 95 aa7.41□□□□□ -1.22
COL4A6-210ENST00000621266 MED13Q9UHV7 2174 aa7.41□□□□□ -1.22
COL4A6-210ENST00000621266 SMIM11BQ8TCY0 68 aa7.41□□□□□ -1.22
COL4A6-210ENST00000621266 SPINK6Q6UWN8 80 aa7.4□□□□□ -1.22
COL4A6-210ENST00000621266 PPDPFQ9H3Y8 114 aa7.4□□□□□ -1.22
COL4A6-210ENST00000621266 TRAV7A0A075B6U4 112 aa7.4□□□□□ -1.22
COL4A6-210ENST00000621266 Q6ZQY7 126 aa7.4□□□□□ -1.22
COL4A6-210ENST00000621266 IBA57-AS1B1ANH7 110 aa7.4□□□□□ -1.22
COL4A6-210ENST00000621266 FAM222AQ5U5X8 452 aa7.4□□□□□ -1.22
COL4A6-210ENST00000621266 A0A0J9YX75 114 aa7.4□□□□□ -1.23
COL4A6-210ENST00000621266 RNF185Q96GF1 192 aa7.4□□□□□ -1.23
COL4A6-210ENST00000621266 SMAD5-AS1Q9Y6J3 95 aa7.4□□□□□ -1.23
COL4A6-210ENST00000621266 IGF1P05019 195 aa7.39□□□□□ -1.23
COL4A6-210ENST00000621266 Q6ZTI0 123 aa7.39□□□□□ -1.23
COL4A6-210ENST00000621266 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
COL4A6-210ENST00000621266 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
COL4A6-210ENST00000621266 GPHB5Q86YW7 130 aa7.39□□□□□ -1.23
COL4A6-210ENST00000621266 BEAN1Q3B7T3 259 aa7.39□□□□□ -1.23
COL4A6-210ENST00000621266 PRO0255Q9UI72 69 aa7.39□□□□□ -1.23
COL4A6-210ENST00000621266 SPG11Q96JI7 2443 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 A0A087WZ39 114 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 U3KQK5 164 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 PRYO14603 147 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 PROK1P58294 105 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 ANKHD1Q8IWZ3 2542 aaKnown RBP7.38□□□□□ -1.23
COL4A6-210ENST00000621266 CACNA1AO00555 2505 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 K7EMT4 169 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 CRIP1P50238 77 aa7.38□□□□□ -1.23
COL4A6-210ENST00000621266 CRIP2P52943 208 aaPredicted RBP7.37□□□□□ -1.23
COL4A6-210ENST00000621266 SHISA2Q6UWI4 295 aa7.37□□□□□ -1.23
COL4A6-210ENST00000621266 IGLV1-47P01700 117 aa7.37□□□□□ -1.23
COL4A6-210ENST00000621266 MAP6D1Q9H9H5 199 aa7.36□□□□□ -1.23
COL4A6-210ENST00000621266 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
COL4A6-210ENST00000621266 C4orf3Q8WVX3 66 aa7.36□□□□□ -1.23
COL4A6-210ENST00000621266 MSMPQ1L6U9 139 aa7.36□□□□□ -1.23
COL4A6-210ENST00000621266 Q8N7P7 452 aa7.36□□□□□ -1.23
COL4A6-210ENST00000621266 COL5A1P20908 1838 aaPredicted RBP7.35□□□□□ -1.23
COL4A6-210ENST00000621266 M0QY20 66 aa7.34□□□□□ -1.23
COL4A6-210ENST00000621266 ZNF295-AS1Q8N0V1 137 aa7.34□□□□□ -1.23
COL4A6-210ENST00000621266 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
COL4A6-210ENST00000621266 CCDC140Q96MF4 163 aa7.34□□□□□ -1.23
COL4A6-210ENST00000621266 Q6ZSV7 163 aa7.33□□□□□ -1.24
COL4A6-210ENST00000621266 TRBV7-7A0A0K0K1E9 115 aa7.33□□□□□ -1.24
COL4A6-210ENST00000621266 MYCNOSP40205 109 aa7.33□□□□□ -1.24
COL4A6-210ENST00000621266 PRO0628Q9UI54 55 aa7.33□□□□□ -1.24
COL4A6-210ENST00000621266 TMEM89A2RUT3 159 aa7.33□□□□□ -1.24
COL4A6-210ENST00000621266 RPL37AP8A6NKH3 93 aa7.33□□□□□ -1.24
COL4A6-210ENST00000621266 ALPK3Q96L96 1907 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 PLCE1Q9P212 2302 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 GAS8-AS1O95177 125 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 CRYGDP07320 174 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 P0C879 139 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 CRYGAP11844 174 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 C4orf26Q17RF5 130 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 NRACQ8N912 160 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 OTOGLQ3ZCN5 2332 aa7.32□□□□□ -1.24
COL4A6-210ENST00000621266 HIVEP2P31629 2446 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 IGLV9-49A0A0B4J1Y8 123 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 M0R2N4 97 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 TSHBP01222 138 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 PTPRSQ13332 1948 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 KIR2DL5BQ8NHK3 375 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 LY6G6CO95867 125 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 Q6ZVQ6 151 aa7.31□□□□□ -1.24
COL4A6-210ENST00000621266 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.3□□□□□ -1.24
COL4A6-210ENST00000621266 TRBV6-8A0A0A6YYG3 113 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 LINC01548A6NM66 108 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 NTM-AS1Q6ZSK4 140 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 LY6LH3BQJ8 138 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 BRWD1-AS2P59051 145 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 ESRGQ1W209 222 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 C11orf45Q8TAV5 145 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 KIAA1549Q9HCM3 1950 aa7.3□□□□□ -1.24
COL4A6-210ENST00000621266 A0A087WYN8 130 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 DHRS4-AS1Q9P1J3 65 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 CSPG4Q6UVK1 2322 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 Q8N3U1 123 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 A6NDX4 124 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 LMO4P61968 165 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 EP400Q96L91 3159 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 M0R378 163 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 IL17DQ8TAD2 202 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 FREM1Q5H8C1 2179 aa7.29□□□□□ -1.24
COL4A6-210ENST00000621266 PIEZO1Q92508 2521 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms