RNA–Protein interactions for RNA: ENST00000621198.4

SYN2-206, Transcript of synapsin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYN2, Length 2,674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-206ENST00000621198 A0A0U1RRA0 63 aa13.69□□□□□ -0.22
SYN2-206ENST00000621198 RS1O15537 224 aa13.69□□□□□ -0.22
SYN2-206ENST00000621198 COX6A2Q02221 97 aa13.69□□□□□ -0.22
SYN2-206ENST00000621198 DEFB113Q30KQ7 82 aa13.69□□□□□ -0.22
SYN2-206ENST00000621198 CCDC168Q8NDH2 2452 aa13.69□□□□□ -0.22
SYN2-206ENST00000621198 UBR5O95071 2799 aaPredicted RBP13.69□□□□□ -0.22
SYN2-206ENST00000621198 LINC01620Q4KN68 170 aa13.68□□□□□ -0.22
SYN2-206ENST00000621198 STHQ8IWL8 128 aa13.68□□□□□ -0.22
SYN2-206ENST00000621198 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
SYN2-206ENST00000621198 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
SYN2-206ENST00000621198 JMJD1CQ15652 2540 aa13.68□□□□□ -0.22
SYN2-206ENST00000621198 CKS1BP61024 79 aa13.68□□□□□ -0.22
SYN2-206ENST00000621198 BEAN1Q3B7T3 259 aa13.68□□□□□ -0.22
SYN2-206ENST00000621198 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 DNAJC30Q96LL9 226 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 SPANXDQ9BXN6 97 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 SPANXCQ9NY87 97 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 NBPF19A0A087WUL8 3843 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 A0A1B0GV72 72 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 LINC00694P0DN24 101 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 ICOSQ9Y6W8 199 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 CIDEAO60543 219 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 ZFAND6Q6FIF0 208 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 TMEM101Q96IK0 257 aa13.67□□□□□ -0.22
SYN2-206ENST00000621198 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
SYN2-206ENST00000621198 CLEC2BQ92478 149 aa13.66□□□□□ -0.22
SYN2-206ENST00000621198 ITPR3Q14573 2671 aa13.65□□□□□ -0.22
SYN2-206ENST00000621198 APCP25054 2843 aa13.65□□□□□ -0.22
SYN2-206ENST00000621198 TRBV30A0A0K0K1B3 111 aa13.65□□□□□ -0.22
SYN2-206ENST00000621198 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.22
SYN2-206ENST00000621198 Q6ZTI0 123 aa13.65□□□□□ -0.22
SYN2-206ENST00000621198 TRAV13-1A0A0B4J241 112 aa13.64□□□□□ -0.23
SYN2-206ENST00000621198 RPL13AP40429 203 aaKnown RBP13.63□□□□□ -0.23
SYN2-206ENST00000621198 Q9H8V8 135 aa13.62□□□□□ -0.23
SYN2-206ENST00000621198 GAGE12JA6NER3 117 aa13.61□□□□□ -0.23
SYN2-206ENST00000621198 GAGE4Q13068 117 aa13.61□□□□□ -0.23
SYN2-206ENST00000621198 GAGE5Q13069 117 aa13.61□□□□□ -0.23
SYN2-206ENST00000621198 LINC00242Q5T6M2 205 aa13.61□□□□□ -0.23
SYN2-206ENST00000621198 SETXQ7Z333 2677 aaKnown RBP13.61□□□□□ -0.23
SYN2-206ENST00000621198 TRBV10-2A0A0K0K1G8 114 aa13.6□□□□□ -0.23
SYN2-206ENST00000621198 DNAJC9-AS1A6NH13 148 aa13.6□□□□□ -0.23
SYN2-206ENST00000621198 NDUFA1O15239 70 aa13.6□□□□□ -0.23
SYN2-206ENST00000621198 TIRAPP58753 221 aa13.6□□□□□ -0.23
SYN2-206ENST00000621198 C2orf82Q6UX34 121 aa13.6□□□□□ -0.23
SYN2-206ENST00000621198 NTM-AS1Q6ZSK4 140 aa13.6□□□□□ -0.23
SYN2-206ENST00000621198 YAE1D1Q9NRH1 226 aa13.6□□□□□ -0.23
SYN2-206ENST00000621198 NOP10Q9NPE3 64 aaKnown RBP13.59□□□□□ -0.23
SYN2-206ENST00000621198 FLNAP21333 2647 aaKnown RBP13.59□□□□□ -0.23
SYN2-206ENST00000621198 CCL24O00175 119 aa13.59□□□□□ -0.23
SYN2-206ENST00000621198 COX6CP09669 75 aa13.59□□□□□ -0.23
SYN2-206ENST00000621198 RPL36AP83881 106 aaKnown RBP13.59□□□□□ -0.23
SYN2-206ENST00000621198 RPL36ALQ969Q0 106 aaKnown RBP13.59□□□□□ -0.23
SYN2-206ENST00000621198 WFDC10AQ9H1F0 79 aa13.59□□□□□ -0.23
SYN2-206ENST00000621198 IGLV5-45A0A087WSX0 123 aa13.58□□□□□ -0.23
SYN2-206ENST00000621198 H7C423 109 aa13.58□□□□□ -0.23
SYN2-206ENST00000621198 K7EQD1 137 aa13.58□□□□□ -0.23
SYN2-206ENST00000621198 TMEM262E9PQX1 116 aa13.58□□□□□ -0.24
SYN2-206ENST00000621198 ZNF843Q8N446 348 aa13.58□□□□□ -0.24
SYN2-206ENST00000621198 M0QXV9 152 aa13.57□□□□□ -0.24
SYN2-206ENST00000621198 HERVK_113P63121 156 aa13.57□□□□□ -0.24
SYN2-206ENST00000621198 KRTAP1-3Q8IUG1 177 aa13.57□□□□□ -0.24
SYN2-206ENST00000621198 CIRBPQ14011 172 aaKnown RBP13.57□□□□□ -0.24
SYN2-206ENST00000621198 WFDC11Q8NEX6 87 aa13.57□□□□□ -0.24
SYN2-206ENST00000621198 IL17DQ8TAD2 202 aa13.56□□□□□ -0.24
SYN2-206ENST00000621198 UBE2WQ96B02 151 aa13.56□□□□□ -0.24
SYN2-206ENST00000621198 CITED2Q99967 270 aaPredicted RBP13.56□□□□□ -0.24
SYN2-206ENST00000621198 ESM1Q9NQ30 184 aa13.56□□□□□ -0.24
SYN2-206ENST00000621198 TIMM17BO60830 172 aa13.56□□□□□ -0.24
SYN2-206ENST00000621198 LINC00308Q8TCZ7 52 aa13.56□□□□□ -0.24
SYN2-206ENST00000621198 SMIM1B2RUZ4 78 aa13.55□□□□□ -0.24
SYN2-206ENST00000621198 IFITM1P13164 125 aa13.55□□□□□ -0.24
SYN2-206ENST00000621198 RPL35AP18077 110 aaKnown RBP13.55□□□□□ -0.24
SYN2-206ENST00000621198 IGLV5-39A0A0G2JS06 123 aa13.54□□□□□ -0.24
SYN2-206ENST00000621198 LOC100131303A0A0U1RQF7 123 aa13.54□□□□□ -0.24
SYN2-206ENST00000621198 MEIG1Q5JSS6 88 aa13.54□□□□□ -0.24
SYN2-206ENST00000621198 PLA2G2AP14555 144 aa13.54□□□□□ -0.24
SYN2-206ENST00000621198 PRIMA1Q86XR5 153 aa13.54□□□□□ -0.24
SYN2-206ENST00000621198 ACANP16112 2415 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 TRAV8-4A0A0B4J246 113 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 GAGE7O76087 117 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 GAGE12FP0CL80 117 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 GAGE12GP0CL81 117 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 GAGE12IP0CL82 117 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 LRRC75A-AS1Q8N1F1 130 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 MTORP42345 2549 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 TRAV25A0A0B4J276 109 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 CRLF1O75462 422 aa13.53□□□□□ -0.24
SYN2-206ENST00000621198 IGKV3OR2-268A0A0C4DH90 116 aa13.52□□□□□ -0.24
SYN2-206ENST00000621198 LST1O00453 97 aa13.52□□□□□ -0.24
SYN2-206ENST00000621198 DAZ2Q13117 558 aaKnown RBP13.52□□□□□ -0.24
SYN2-206ENST00000621198 SOSTDC1Q6X4U4 206 aa13.52□□□□□ -0.24
SYN2-206ENST00000621198 DAZ4Q86SG3 579 aaKnown RBP13.52□□□□□ -0.24
SYN2-206ENST00000621198 DAZ3Q9NR90 486 aaKnown RBP13.52□□□□□ -0.24
SYN2-206ENST00000621198 TRGV2A0A075B6R0 118 aa13.52□□□□□ -0.25
SYN2-206ENST00000621198 TRAV4A0A0B4J268 109 aa13.52□□□□□ -0.25
SYN2-206ENST00000621198 HIST2H2BCQ6DN03 193 aa13.52□□□□□ -0.25
SYN2-206ENST00000621198 CLUHP3Q96NS8 147 aa13.52□□□□□ -0.25
SYN2-206ENST00000621198 CDC42SE2Q9NRR3 84 aa13.52□□□□□ -0.25
SYN2-206ENST00000621198 UBE2L6O14933 153 aa13.51□□□□□ -0.25
SYN2-206ENST00000621198 TEX29Q8N6K0 151 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms