RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 ICOSQ9Y6W8 199 aa11.65□□□□□ -0.54
DKC1-213ENST00000620277 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
DKC1-213ENST00000620277 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
DKC1-213ENST00000620277 IGHV1-58A0A0C4DH39 117 aa11.64□□□□□ -0.55
DKC1-213ENST00000620277 CHCHD7Q9BUK0 85 aa11.64□□□□□ -0.55
DKC1-213ENST00000620277 Q9H8V8 135 aa11.64□□□□□ -0.55
DKC1-213ENST00000620277 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.63□□□□□ -0.55
DKC1-213ENST00000620277 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 GAGE4Q13068 117 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 GAGE5Q13069 117 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 LINC01356Q8N9X3 169 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 LITAFQ99732 161 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 TOMM7Q9P0U1 55 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 UBE2D4Q9Y2X8 147 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 GAGE2EQ4V326 116 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 MEIG1Q5JSS6 88 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 GAGE2DQ9UEU5 116 aa11.63□□□□□ -0.55
DKC1-213ENST00000620277 C15orf53Q8NAA6 179 aa11.62□□□□□ -0.55
DKC1-213ENST00000620277 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
DKC1-213ENST00000620277 ZNF702PQ9H963 129 aa11.62□□□□□ -0.55
DKC1-213ENST00000620277 VPREB3Q9UKI3 123 aa11.62□□□□□ -0.55
DKC1-213ENST00000620277 PRORYQ9H606 182 aa11.62□□□□□ -0.55
DKC1-213ENST00000620277 ITPR2Q14571 2701 aa11.62□□□□□ -0.55
DKC1-213ENST00000620277 H7C423 109 aa11.61□□□□□ -0.55
DKC1-213ENST00000620277 A0A0B4J2C4 111 aa11.61□□□□□ -0.55
DKC1-213ENST00000620277 MRPS36P82909 103 aaKnown RBP11.61□□□□□ -0.55
DKC1-213ENST00000620277 UBE2WQ96B02 151 aa11.61□□□□□ -0.55
DKC1-213ENST00000620277 TMEM101Q96IK0 257 aa11.61□□□□□ -0.55
DKC1-213ENST00000620277 C11orf68Q9H3H3 251 aaKnown RBP11.6□□□□□ -0.55
DKC1-213ENST00000620277 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
DKC1-213ENST00000620277 COX6CP09669 75 aa11.6□□□□□ -0.55
DKC1-213ENST00000620277 ZNF415Q09FC8 603 aa11.6□□□□□ -0.55
DKC1-213ENST00000620277 PIK3CD-AS1Q5SR53 167 aa11.6□□□□□ -0.55
DKC1-213ENST00000620277 Q6ZTI0 123 aa11.6□□□□□ -0.55
DKC1-213ENST00000620277 BRI3O95415 125 aa11.59□□□□□ -0.55
DKC1-213ENST00000620277 Q8N2B8 174 aa11.58□□□□□ -0.55
DKC1-213ENST00000620277 LOC100131303A0A0U1RQF7 123 aa11.58□□□□□ -0.56
DKC1-213ENST00000620277 RS1O15537 224 aa11.58□□□□□ -0.56
DKC1-213ENST00000620277 RPL35AP18077 110 aaKnown RBP11.58□□□□□ -0.56
DKC1-213ENST00000620277 MIAQ16674 131 aa11.58□□□□□ -0.56
DKC1-213ENST00000620277 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
DKC1-213ENST00000620277 HIST2H2BCQ6DN03 193 aa11.57□□□□□ -0.56
DKC1-213ENST00000620277 SBSPONQ8IVN8 264 aa11.57□□□□□ -0.56
DKC1-213ENST00000620277 TRBV10-2A0A0K0K1G8 114 aa11.57□□□□□ -0.56
DKC1-213ENST00000620277 CCDC179H3BU77 68 aa11.56□□□□□ -0.56
DKC1-213ENST00000620277 NOP10Q9NPE3 64 aaKnown RBP11.56□□□□□ -0.56
DKC1-213ENST00000620277 TMEM262E9PQX1 116 aa11.56□□□□□ -0.56
DKC1-213ENST00000620277 STHQ8IWL8 128 aa11.56□□□□□ -0.56
DKC1-213ENST00000620277 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
DKC1-213ENST00000620277 Q9HAA7 133 aa11.55□□□□□ -0.56
DKC1-213ENST00000620277 GAGE7O76087 117 aa11.54□□□□□ -0.56
DKC1-213ENST00000620277 GAGE12FP0CL80 117 aa11.54□□□□□ -0.56
DKC1-213ENST00000620277 GAGE12GP0CL81 117 aa11.54□□□□□ -0.56
DKC1-213ENST00000620277 GAGE12IP0CL82 117 aa11.54□□□□□ -0.56
DKC1-213ENST00000620277 TINCRA0A1B0GVN0 87 aa11.54□□□□□ -0.56
DKC1-213ENST00000620277 TMEM89A2RUT3 159 aa11.54□□□□□ -0.56
DKC1-213ENST00000620277 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
DKC1-213ENST00000620277 VWFP04275 2813 aa11.53□□□□□ -0.56
DKC1-213ENST00000620277 INSP01308 110 aa11.53□□□□□ -0.56
DKC1-213ENST00000620277 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
DKC1-213ENST00000620277 CITED2Q99967 270 aaPredicted RBP11.53□□□□□ -0.56
DKC1-213ENST00000620277 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
DKC1-213ENST00000620277 SOSTDC1Q6X4U4 206 aa11.53□□□□□ -0.56
DKC1-213ENST00000620277 C11orf72Q8NBR9 251 aa11.53□□□□□ -0.56
DKC1-213ENST00000620277 Q6YL49 198 aa11.52□□□□□ -0.56
DKC1-213ENST00000620277 TRGV2A0A075B6R0 118 aa11.52□□□□□ -0.57
DKC1-213ENST00000620277 NHLRC4P0CG21 123 aaPredicted RBP11.52□□□□□ -0.57
DKC1-213ENST00000620277 CIRBPQ14011 172 aaKnown RBP11.52□□□□□ -0.57
DKC1-213ENST00000620277 Q96MF0 132 aa11.52□□□□□ -0.57
DKC1-213ENST00000620277 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.57
DKC1-213ENST00000620277 DEFB114Q30KQ6 69 aa11.51□□□□□ -0.57
DKC1-213ENST00000620277 NTM-AS1Q6ZSK4 140 aa11.51□□□□□ -0.57
DKC1-213ENST00000620277 LINC00308Q8TCZ7 52 aa11.51□□□□□ -0.57
DKC1-213ENST00000620277 NDUFV3P56181 108 aaKnown RBP11.51□□□□□ -0.57
DKC1-213ENST00000620277 GAGE6Q13070 117 aa11.51□□□□□ -0.57
DKC1-213ENST00000620277 ODF3L2Q3SX64 289 aa11.51□□□□□ -0.57
DKC1-213ENST00000620277 SPANXA1Q9NS26 97 aa11.51□□□□□ -0.57
DKC1-213ENST00000620277 A0A096LPF7 62 aa11.51□□□□□ -0.57
DKC1-213ENST00000620277 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
DKC1-213ENST00000620277 PFN2P35080 140 aa11.5□□□□□ -0.57
DKC1-213ENST00000620277 CR1P17927 2039 aa11.5□□□□□ -0.57
DKC1-213ENST00000620277 CLPSL2Q6UWE3 100 aa11.5□□□□□ -0.57
DKC1-213ENST00000620277 C1orf158Q8N1D5 194 aa11.5□□□□□ -0.57
DKC1-213ENST00000620277 PEMTQ9UBM1 199 aa11.5□□□□□ -0.57
DKC1-213ENST00000620277 CITED1Q99966 193 aa11.49□□□□□ -0.57
DKC1-213ENST00000620277 FASNP49327 2511 aaKnown RBP11.49□□□□□ -0.57
DKC1-213ENST00000620277 UBE2L6O14933 153 aa11.49□□□□□ -0.57
DKC1-213ENST00000620277 IFITM1P13164 125 aa11.49□□□□□ -0.57
DKC1-213ENST00000620277 HECTD1Q9ULT8 2610 aa11.48□□□□□ -0.57
DKC1-213ENST00000620277 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
DKC1-213ENST00000620277 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
DKC1-213ENST00000620277 SPANXDQ9BXN6 97 aa11.47□□□□□ -0.57
DKC1-213ENST00000620277 SPANXCQ9NY87 97 aa11.47□□□□□ -0.57
DKC1-213ENST00000620277 LST1O00453 97 aa11.47□□□□□ -0.57
DKC1-213ENST00000620277 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
DKC1-213ENST00000620277 SMIM1B2RUZ4 78 aa11.46□□□□□ -0.57
DKC1-213ENST00000620277 ATP5G1P05496 136 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms