RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, human

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-223	ENST00000619193	PRO1854	Q9UHT4	67 aa		4.29	□□□□□ -1.72
RDM1-223	ENST00000619193	ZAN	Q9Y493	2812 aa		4.29	□□□□□ -1.72
RDM1-223	ENST00000619193	CR1	P17927	2039 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193		B4DSR2	109 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193		F5H697	171 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193		J3QLI3	93 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193		J3QR89	54 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	RS1	O15537	224 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	IGKV3-20	P01619	116 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	PRM2	P04554	102 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	IGHV3-30-3	P0DP02	117 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	LGALS3	P17931	250 aa	Known RBP	4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	GATA3	P23771	443 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	SYNJ2BP	P57105	145 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	FAM74A4	Q5TZK3	123 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	SFTA2	Q6UW10	78 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	FAM19A3	Q7Z5A8	133 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	RNF183	Q96D59	192 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	UBE2E2	Q96LR5	201 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	UBE2D4	Q9Y2X8	147 aa		4.28	□□□□□ -1.72
RDM1-223	ENST00000619193	TRAV8-3	A0A0A6YYJ7	113 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	IGHV1-58	A0A0C4DH39	117 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	LOC107984156	A0A0G2JMH3	177 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	IGLV5-39	A0A0G2JS06	123 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	TRBV30	A0A0K0K1B3	111 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	TINCR	A0A1B0GVN0	87 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	CIDEA	O60543	219 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	TIMM17B	O60830	172 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	CD28	P10747	220 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	RPL13A	P40429	203 aa	Known RBP	4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	SLURP1	P55000	103 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	LINC01620	Q4KN68	170 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.27	□□□□□ -1.73
RDM1-223	ENST00000619193		Q6YL49	198 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	ARL17A	Q8IVW1	177 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	LINC01356	Q8N9X3	169 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	ZNF418	Q8TF45	676 aa	Predicted RBP	4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	VSIG2	Q96IQ7	327 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	CLUHP3	Q96NS8	147 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	DUX5	Q96PT3	197 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	VCX2	Q9H322	139 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	VPREB3	Q9UKI3	123 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	BIRC6	Q9NR09	4857 aa		4.27	□□□□□ -1.73
RDM1-223	ENST00000619193	WNK1	Q9H4A3	2382 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	IGHV3-64	A0A075B6Q5	118 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193		A8MWV9	139 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193		A8MZ25	164 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	TRIAP1	O43715	76 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	SLC25A20	O43772	301 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	IGHV3-53	P01767	116 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	NHLRC4	P0CG21	123 aa	Predicted RBP	4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	IGHV4-31	P0DP07	118 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	TIRAP	P58753	221 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	DSCR9	P59020	149 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	DEFB131A	P59861	70 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	SNRPD3	P62318	126 aa	Known RBP	4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	SCGB2A2	Q13296	93 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	MIA	Q16674	131 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	DEFB121	Q5J5C9	76 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	LYRM7	Q5U5X0	104 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	ZFAND6	Q6FIF0	208 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	TIMM21	Q9BVV7	248 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	MAP6D1	Q9H9H5	199 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	SPANXA1	Q9NS26	97 aa		4.26	□□□□□ -1.73
RDM1-223	ENST00000619193	IGHV3OR16-12	A0A075B7B8	117 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	IGHV3-73	A0A0B4J1V6	119 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	TGFA	P01135	160 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	COX6A2	Q02221	97 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	RNASE13	Q5GAN3	156 aa	Known RBP	4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	SOSTDC1	Q6X4U4	206 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193		Q6ZSV7	163 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	TMEM61	Q8N0U2	210 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	C1orf158	Q8N1D5	194 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	DNAJC30	Q96LL9	226 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	YAE1D1	Q9NRH1	226 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	BEX4	Q9NWD9	120 aa	Predicted RBP	4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	ERG28	Q9UKR5	140 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	C22orf24	Q9Y442	160 aa		4.25	□□□□□ -1.73
RDM1-223	ENST00000619193	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	TRBV10-2	A0A0K0K1G8	114 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.24	□□□□□ -1.73
RDM1-223	ENST00000619193		C9JAW5	83 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193		F5H768	121 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	NDUFA1	O15239	70 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	SPINK8	P0C7L1	97 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	CKS1B	P61024	79 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	ZNF415	Q09FC8	603 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	DEFB136	Q30KP8	78 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	DEFB114	Q30KQ6	69 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	ODF3L2	Q3SX64	289 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	NTM-AS1	Q6ZSK4	140 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	NTN5	Q8WTR8	489 aa	Predicted RBP	4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	RAX2	Q96IS3	184 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	CITED2	Q99967	270 aa	Predicted RBP	4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	SPX	Q9BT56	116 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	NDUFA12	Q9UI09	145 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	ICOS	Q9Y6W8	199 aa		4.24	□□□□□ -1.73
RDM1-223	ENST00000619193	EPPK1	P58107	5090 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms