RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 SRRM5B3KS81 715 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 FAM72AQ5TYM5 149 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 FAM53AQ6NSI3 398 aaPredicted RBP2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 Q8NDZ9 215 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 TTTY13Q9BZ97 58 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 LINC00597Q9H2U6 94 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 MPDZO75970 2070 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 IGHV3-43A0A0B4J1X8 118 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 IGHV3-33P01772 117 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 RPL36AP83881 106 aaKnown RBP2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 CYYR1Q96J86 154 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 FER1L5A0AVI2 2057 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 DNAH9Q9NYC9 4486 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 K7EMI3 77 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 MOBPQ13875 183 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 Q8N3U1 123 aa2.8□□□□□ -1.96
UBE2D3-233ENST00000618836 IGLV5-45A0A087WSX0 123 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 IGHV3-35A0A0C4DH35 117 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 IGHV5-51A0A0C4DH38 117 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 IGHV3-13P01766 116 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 SHANK1Q9Y566 2161 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 IGLV5-52A0A0A0MRZ9 124 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 IGLV2-11P01706 119 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 CISD3P0C7P0 127 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 NANOS2P60321 138 aaKnown RBP2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 ROMO1P60602 79 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 Q6ZR03 302 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 Q8IYB0 196 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 TMEM263Q8WUH6 116 aaKnown RBP2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 MGAQ8IWI9 3026 aa2.79□□□□□ -1.96
UBE2D3-233ENST00000618836 LYPD2Q6UXB3 125 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 C20orf203Q8NBC4 194 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 LINC00476Q8WZB0 136 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 CDC42SE2Q9NRR3 84 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 ZANQ9Y493 2812 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 IGHV3-74A0A0B4J1X5 117 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 LOC101927531A0A1B0GV80 90 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 TMEM14DPA8MWL7 114 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 IGKV1D-33P01593 117 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 IGKV1-33P01594 117 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 ADM2Q7Z4H4 148 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 TMEM14BQ9NUH8 114 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 NSD1Q96L73 2696 aaPredicted RBP2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 PKHD1P08F94 4074 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 PRSS1P07477 247 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 PRSS2P07478 247 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 IGLV3-21P80748 117 aaPredicted RBP2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 LIMD2Q9BT23 127 aa2.78□□□□□ -1.96
UBE2D3-233ENST00000618836 ASXL3Q9C0F0 2248 aa2.78□□□□□ -1.97
UBE2D3-233ENST00000618836 PTPRQQ9UMZ3 2332 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 INAFM1C9JVW0 142 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 SOCS3O14543 225 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 IGHV3-30P01768 117 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 IGHV3-30-5P0DP03 117 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 LYPD6Q86Y78 171 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 OBSCN-AS1Q96MR7 158 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 IGHV3-11P01762 117 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 RPL28P46779 137 aaKnown RBP2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 EIF4EBP1Q13541 118 aaPredicted RBP2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 REG3GQ6UW15 175 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 ZNF525Q8N782 197 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 U3KQK5 164 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 RP1L1Q8IWN7 2480 aaPredicted RBP2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 PLXNB1O43157 2135 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 PSCAO43653 123 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 COX6B1P14854 86 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 FXYD6P3P58550 94 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 PRSS3P2Q8NHM4 247 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 GFRA4Q9GZZ7 299 aa2.77□□□□□ -1.97
UBE2D3-233ENST00000618836 NBEAL1Q6ZS30 2694 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 RPS27LQ71UM5 84 aaKnown RBP2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 S4R3C0 116 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 PRRC2AP48634 2157 aaKnown RBP2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 A0A087WVE0 104 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 C11orf86A6NJI1 115 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 FAM72CH0Y354 149 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 LHBP01229 141 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 LY6G5CQ5SRR4 150 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 FAM72DQ6L9T8 149 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 LINC00467Q9BRT7 94 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 HUWE1Q7Z6Z7 4374 aaKnown RBP2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 HEATR1Q9H583 2144 aaKnown RBP2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 IGLV2-23P01705 113 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 FXYD7P58549 80 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 C1orf147Q96MC9 270 aaPredicted RBP2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
UBE2D3-233ENST00000618836 COX6CP09669 75 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 KRTAP1-3Q8IUG1 177 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 CNEP1R1Q8N9A8 125 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 C8orf17Q9NRJ1 99 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 IGKV6D-41A0A0C4DH26 115 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 SPINT3P49223 89 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 SPTSSBQ8NFR3 76 aa2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 FGF23Q9GZV9 251 aaPredicted RBP2.75□□□□□ -1.97
UBE2D3-233ENST00000618836 KIF25-AS1Q9Y6Z4 181 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms