RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GAGE2BQ13066 116 aa14.69□□□□□ -0.06
NEK3-208ENST00000618534 GAGE2EQ4V326 116 aa14.69□□□□□ -0.06
NEK3-208ENST00000618534 KHDC1LQ5JSQ8 128 aa14.69□□□□□ -0.06
NEK3-208ENST00000618534 GAGE2DQ9UEU5 116 aa14.69□□□□□ -0.06
NEK3-208ENST00000618534 FBN2P35556 2912 aa14.67□□□□□ -0.06
NEK3-208ENST00000618534 IGSF10Q6WRI0 2623 aa14.67□□□□□ -0.06
NEK3-208ENST00000618534 ZNF625Q96I27 306 aaPredicted RBP14.66□□□□□ -0.06
NEK3-208ENST00000618534 CITED2Q99967 270 aaPredicted RBP14.66□□□□□ -0.06
NEK3-208ENST00000618534 Q9H8V8 135 aa14.66□□□□□ -0.06
NEK3-208ENST00000618534 XCL2Q9UBD3 114 aa14.66□□□□□ -0.06
NEK3-208ENST00000618534 MYO18BQ8IUG5 2567 aa14.66□□□□□ -0.06
NEK3-208ENST00000618534 NHLRC4P0CG21 123 aaPredicted RBP14.66□□□□□ -0.06
NEK3-208ENST00000618534 LINC00242Q5T6M2 205 aa14.66□□□□□ -0.06
NEK3-208ENST00000618534 LINC00694P0DN24 101 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 IGHV4-31P0DP07 118 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 DEFB114Q30KQ6 69 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 C15orf53Q8NAA6 179 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 C4orf3Q8WVX3 66 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 A0A0U1RRA0 63 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 NDUFA7O95182 113 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 LINC00308Q8TCZ7 52 aa14.65□□□□□ -0.06
NEK3-208ENST00000618534 IGLV5-39A0A0G2JS06 123 aa14.64□□□□□ -0.07
NEK3-208ENST00000618534 CIRBPQ14011 172 aaKnown RBP14.64□□□□□ -0.07
NEK3-208ENST00000618534 MYO9AB2RTY4 2548 aa14.64□□□□□ -0.07
NEK3-208ENST00000618534 HERVK_113P63121 156 aa14.63□□□□□ -0.07
NEK3-208ENST00000618534 Q8N2B8 174 aa14.63□□□□□ -0.07
NEK3-208ENST00000618534 NDUFV3P56181 108 aaKnown RBP14.63□□□□□ -0.07
NEK3-208ENST00000618534 CENPEQ02224 2701 aa14.62□□□□□ -0.07
NEK3-208ENST00000618534 CR1P17927 2039 aa14.62□□□□□ -0.07
NEK3-208ENST00000618534 TRGV1A0A0A0MS02 117 aa14.62□□□□□ -0.07
NEK3-208ENST00000618534 SMIM1B2RUZ4 78 aa14.61□□□□□ -0.07
NEK3-208ENST00000618534 ODF3L2Q3SX64 289 aa14.61□□□□□ -0.07
NEK3-208ENST00000618534 ACACBO00763 2458 aa14.6□□□□□ -0.07
NEK3-208ENST00000618534 TRAV13-1A0A0B4J241 112 aa14.6□□□□□ -0.07
NEK3-208ENST00000618534 TTC32Q5I0X7 151 aa14.6□□□□□ -0.07
NEK3-208ENST00000618534 SOSTDC1Q6X4U4 206 aa14.6□□□□□ -0.07
NEK3-208ENST00000618534 C1orf158Q8N1D5 194 aa14.6□□□□□ -0.07
NEK3-208ENST00000618534 Q6Q795 121 aa14.6□□□□□ -0.07
NEK3-208ENST00000618534 NTM-AS1Q6ZSK4 140 aa14.59□□□□□ -0.07
NEK3-208ENST00000618534 IL17DQ8TAD2 202 aa14.59□□□□□ -0.07
NEK3-208ENST00000618534 DEFB121Q5J5C9 76 aa14.58□□□□□ -0.07
NEK3-208ENST00000618534 GAGE5Q13069 117 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 GAGE6Q13070 117 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 K7EQD1 137 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 RPL36AP83881 106 aaKnown RBP14.57□□□□□ -0.08
NEK3-208ENST00000618534 FAM19A3Q7Z5A8 133 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 STHQ8IWL8 128 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 RPL36ALQ969Q0 106 aaKnown RBP14.57□□□□□ -0.08
NEK3-208ENST00000618534 TEX15Q9BXT5 2789 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 CACNA1AO00555 2505 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 FAM208BQ5VWN6 2430 aa14.57□□□□□ -0.08
NEK3-208ENST00000618534 Q6ZTI0 123 aa14.56□□□□□ -0.08
NEK3-208ENST00000618534 PRIMA1Q86XR5 153 aa14.56□□□□□ -0.08
NEK3-208ENST00000618534 FAM240AA0A1B0GVK7 77 aa14.55□□□□□ -0.08
NEK3-208ENST00000618534 MEIG1Q5JSS6 88 aa14.55□□□□□ -0.08
NEK3-208ENST00000618534 CHD6Q8TD26 2715 aa14.55□□□□□ -0.08
NEK3-208ENST00000618534 COX7A2LO14548 114 aa14.55□□□□□ -0.08
NEK3-208ENST00000618534 CSDC2Q9Y534 153 aaKnown RBP14.55□□□□□ -0.08
NEK3-208ENST00000618534 B5MCH6 92 aa14.54□□□□□ -0.08
NEK3-208ENST00000618534 F5H768 121 aa14.54□□□□□ -0.08
NEK3-208ENST00000618534 SS18L2Q9UHA2 77 aa14.54□□□□□ -0.08
NEK3-208ENST00000618534 GAGE12JA6NER3 117 aa14.54□□□□□ -0.08
NEK3-208ENST00000618534 GAGE4Q13068 117 aa14.54□□□□□ -0.08
NEK3-208ENST00000618534 TRBV10-1A0A0K0K1A3 114 aa14.53□□□□□ -0.08
NEK3-208ENST00000618534 MRPL23Q16540 153 aaKnown RBP14.53□□□□□ -0.08
NEK3-208ENST00000618534 SHISA2Q6UWI4 295 aa14.53□□□□□ -0.08
NEK3-208ENST00000618534 CDC42SE2Q9NRR3 84 aa14.53□□□□□ -0.08
NEK3-208ENST00000618534 PTPN13Q12923 2485 aa14.53□□□□□ -0.08
NEK3-208ENST00000618534 DAZ2Q13117 558 aaKnown RBP14.53□□□□□ -0.08
NEK3-208ENST00000618534 DAZ4Q86SG3 579 aaKnown RBP14.53□□□□□ -0.08
NEK3-208ENST00000618534 DAZ3Q9NR90 486 aaKnown RBP14.53□□□□□ -0.08
NEK3-208ENST00000618534 KRTAP10-9P60411 292 aa14.52□□□□□ -0.09
NEK3-208ENST00000618534 COPS9Q8WXC6 57 aa14.52□□□□□ -0.09
NEK3-208ENST00000618534 WNK1Q9H4A3 2382 aa14.51□□□□□ -0.09
NEK3-208ENST00000618534 CCDC179H3BU77 68 aa14.51□□□□□ -0.09
NEK3-208ENST00000618534 C11orf44Q8N8P7 122 aa14.51□□□□□ -0.09
NEK3-208ENST00000618534 LRRK2Q5S007 2527 aa14.5□□□□□ -0.09
NEK3-208ENST00000618534 Q96MF0 132 aa14.5□□□□□ -0.09
NEK3-208ENST00000618534 A0A1W2PRX2 142 aa14.5□□□□□ -0.09
NEK3-208ENST00000618534 NAV2Q8IVL1 2488 aa14.49□□□□□ -0.09
NEK3-208ENST00000618534 ABCA12Q86UK0 2595 aa14.49□□□□□ -0.09
NEK3-208ENST00000618534 GAGE7O76087 117 aa14.49□□□□□ -0.09
NEK3-208ENST00000618534 GAGE12FP0CL80 117 aa14.49□□□□□ -0.09
NEK3-208ENST00000618534 GAGE12GP0CL81 117 aa14.49□□□□□ -0.09
NEK3-208ENST00000618534 GAGE12IP0CL82 117 aa14.49□□□□□ -0.09
NEK3-208ENST00000618534 AKAP9Q99996 3911 aa14.49□□□□□ -0.09
NEK3-208ENST00000618534 NOP10Q9NPE3 64 aaKnown RBP14.49□□□□□ -0.09
NEK3-208ENST00000618534 EPG5Q9HCE0 2579 aa14.48□□□□□ -0.09
NEK3-208ENST00000618534 TRAV25A0A0B4J276 109 aa14.48□□□□□ -0.09
NEK3-208ENST00000618534 HERV-K104P63124 156 aa14.48□□□□□ -0.09
NEK3-208ENST00000618534 C2CD3Q4AC94 2353 aa14.48□□□□□ -0.09
NEK3-208ENST00000618534 CUBNO60494 3623 aa14.47□□□□□ -0.09
NEK3-208ENST00000618534 TLN2Q9Y4G6 2542 aa14.47□□□□□ -0.09
NEK3-208ENST00000618534 UBE2L6O14933 153 aa14.46□□□□□ -0.09
NEK3-208ENST00000618534 TMEM243Q9BU79 118 aa14.46□□□□□ -0.09
NEK3-208ENST00000618534 NOTCH3Q9UM47 2321 aa14.46□□□□□ -0.1
NEK3-208ENST00000618534 FAM218AQ96MZ4 157 aa14.45□□□□□ -0.1
NEK3-208ENST00000618534 LOC100131303A0A0U1RQF7 123 aa14.45□□□□□ -0.1
NEK3-208ENST00000618534 PRB1P04280 392 aa14.45□□□□□ -0.1
NEK3-208ENST00000618534 TRACP01848 142 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms