RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 IGLV4-3A0A075B6K6 122 aa8.09□□□□□ -1.11
PDPN-211ENST00000617617 A0A087WX48 190 aa8.09□□□□□ -1.11
PDPN-211ENST00000617617 KRTDAPP60985 99 aa8.09□□□□□ -1.11
PDPN-211ENST00000617617 C20orf202A1L168 122 aa8.08□□□□□ -1.12
PDPN-211ENST00000617617 PMVKQ15126 192 aa8.08□□□□□ -1.12
PDPN-211ENST00000617617 Q6ZN92 141 aa8.08□□□□□ -1.12
PDPN-211ENST00000617617 FGF6P10767 208 aa8.08□□□□□ -1.12
PDPN-211ENST00000617617 ODF1Q14990 250 aa8.08□□□□□ -1.12
PDPN-211ENST00000617617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
PDPN-211ENST00000617617 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
PDPN-211ENST00000617617 TEX43Q6ZNM6 134 aa8.07□□□□□ -1.12
PDPN-211ENST00000617617 NUPR2A6NF83 97 aa8.07□□□□□ -1.12
PDPN-211ENST00000617617 UBE2L6O14933 153 aa8.07□□□□□ -1.12
PDPN-211ENST00000617617 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
PDPN-211ENST00000617617 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
PDPN-211ENST00000617617 CDC42SE2Q9NRR3 84 aa8.07□□□□□ -1.12
PDPN-211ENST00000617617 EREGO14944 169 aa8.07□□□□□ -1.12
PDPN-211ENST00000617617 DLEU1O43261 78 aa8.06□□□□□ -1.12
PDPN-211ENST00000617617 MAJINQ3KP22 176 aa8.06□□□□□ -1.12
PDPN-211ENST00000617617 ZNF664Q8N3J9 261 aa8.06□□□□□ -1.12
PDPN-211ENST00000617617 TMEM101Q96IK0 257 aa8.06□□□□□ -1.12
PDPN-211ENST00000617617 UPK3BQ9BT76 320 aa8.06□□□□□ -1.12
PDPN-211ENST00000617617 F8VRH5 84 aa8.05□□□□□ -1.12
PDPN-211ENST00000617617 PRSS1P07477 247 aa8.05□□□□□ -1.12
PDPN-211ENST00000617617 PLNP26678 52 aa8.05□□□□□ -1.12
PDPN-211ENST00000617617 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
PDPN-211ENST00000617617 PRSS29PA6NIE9 313 aa8.05□□□□□ -1.12
PDPN-211ENST00000617617 OR5A1Q8NGJ0 315 aa8.05□□□□□ -1.12
PDPN-211ENST00000617617 VCX2Q9H322 139 aa8.05□□□□□ -1.12
PDPN-211ENST00000617617 MRPS16Q9Y3D3 137 aaKnown RBP8.05□□□□□ -1.12
PDPN-211ENST00000617617 TRAV8-6A0A0B4J262 113 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 CCL25O15444 150 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 SCGB1D1O95968 90 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 ESRGQ1W209 222 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 TMEM238LA0A1B0GVL6 79 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 Q6ZUT4 128 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 CHCHD5Q9BSY4 110 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 APLNQ9ULZ1 77 aa8.04□□□□□ -1.12
PDPN-211ENST00000617617 CHTOPQ9Y3Y2 248 aaKnown RBP8.04□□□□□ -1.12
PDPN-211ENST00000617617 IGLV4-69A0A075B6H9 119 aa8.03□□□□□ -1.12
PDPN-211ENST00000617617 KLK5Q9Y337 293 aaPredicted RBP8.03□□□□□ -1.12
PDPN-211ENST00000617617 DPM2O94777 84 aa8.03□□□□□ -1.12
PDPN-211ENST00000617617 AMMECR1LQ6DCA0 310 aa8.03□□□□□ -1.12
PDPN-211ENST00000617617 UBE2D1P51668 147 aa8.02□□□□□ -1.12
PDPN-211ENST00000617617 GAGE6Q13070 117 aa8.02□□□□□ -1.12
PDPN-211ENST00000617617 SNHG12Q9BXW3 62 aa8.02□□□□□ -1.12
PDPN-211ENST00000617617 RBX1P62877 108 aa8.02□□□□□ -1.13
PDPN-211ENST00000617617 DGAT2L7PQ6IED9 249 aa8.02□□□□□ -1.13
PDPN-211ENST00000617617 IGLV5-45A0A087WSX0 123 aa8.02□□□□□ -1.13
PDPN-211ENST00000617617 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
PDPN-211ENST00000617617 M0R143 59 aa8.02□□□□□ -1.13
PDPN-211ENST00000617617 IGKCP01834 107 aa8.02□□□□□ -1.13
PDPN-211ENST00000617617 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
PDPN-211ENST00000617617 OPRPNQ99935 248 aaPredicted RBP8.02□□□□□ -1.13
PDPN-211ENST00000617617 MRPL35Q9NZE8 188 aaKnown RBP8.02□□□□□ -1.13
PDPN-211ENST00000617617 K7EP13 123 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 SEC11AP67812 179 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 CSMD3Q7Z407 3707 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 TRAV9-2A0A087WT02 112 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 MPV17L2Q567V2 206 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 PRR34Q9NV39 138 aa8.01□□□□□ -1.13
PDPN-211ENST00000617617 STAB2Q8WWQ8 2551 aa8□□□□□ -1.13
PDPN-211ENST00000617617 IGLL5B9A064 214 aa8□□□□□ -1.13
PDPN-211ENST00000617617 FBN3Q75N90 2809 aa8□□□□□ -1.13
PDPN-211ENST00000617617 C11orf86A6NJI1 115 aa7.99□□□□□ -1.13
PDPN-211ENST00000617617 CCL18P55774 89 aa7.99□□□□□ -1.13
PDPN-211ENST00000617617 LINC00588Q9Y4M8 146 aa7.99□□□□□ -1.13
PDPN-211ENST00000617617 DNAH6Q9C0G6 4158 aa7.99□□□□□ -1.13
PDPN-211ENST00000617617 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
PDPN-211ENST00000617617 STARD9Q9P2P6 4700 aa7.98□□□□□ -1.13
PDPN-211ENST00000617617 H0Y8G0 127 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 HERVK_113P63121 156 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 ZC2HC1BQ5TFG8 222 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 TMEM262E9PQX1 116 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 WFDC10BQ8IUB3 73 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 PLECQ15149 4684 aaKnown RBP7.97□□□□□ -1.13
PDPN-211ENST00000617617 DNAH1Q9P2D7 4330 aa7.97□□□□□ -1.13
PDPN-211ENST00000617617 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.13
PDPN-211ENST00000617617 CHAC1Q9BUX1 264 aa7.96□□□□□ -1.13
PDPN-211ENST00000617617 A0A0J9YXV3 536 aa7.96□□□□□ -1.14
PDPN-211ENST00000617617 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
PDPN-211ENST00000617617 MUC7Q8TAX7 377 aa7.96□□□□□ -1.14
PDPN-211ENST00000617617 PMCHL2Q9BQD1 86 aa7.96□□□□□ -1.14
PDPN-211ENST00000617617 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
PDPN-211ENST00000617617 HSBP1L1C9JCN9 74 aa7.95□□□□□ -1.14
PDPN-211ENST00000617617 VPS13DQ5THJ4 4388 aa7.95□□□□□ -1.14
PDPN-211ENST00000617617 TMEM223A0PJW6 202 aa7.95□□□□□ -1.14
PDPN-211ENST00000617617 REG3AQ06141 175 aa7.94□□□□□ -1.14
PDPN-211ENST00000617617 RNASE13Q5GAN3 156 aaKnown RBP7.94□□□□□ -1.14
PDPN-211ENST00000617617 E9PLD3 99 aa7.94□□□□□ -1.14
PDPN-211ENST00000617617 SIVA1O15304 175 aa7.94□□□□□ -1.14
PDPN-211ENST00000617617 SS18Q15532 418 aa7.94□□□□□ -1.14
PDPN-211ENST00000617617 ANGP03950 147 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms