RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 Q9H8V8 135 aa7.95□□□□□ -1.14
TARDBP-217ENST00000616545 CDC42SE2Q9NRR3 84 aa7.95□□□□□ -1.14
TARDBP-217ENST00000616545 MPV17L2Q567V2 206 aa7.94□□□□□ -1.14
TARDBP-217ENST00000616545 TTC32Q5I0X7 151 aa7.94□□□□□ -1.14
TARDBP-217ENST00000616545 TEX43Q6ZNM6 134 aa7.94□□□□□ -1.14
TARDBP-217ENST00000616545 HIST1H2BLQ99880 126 aa7.94□□□□□ -1.14
TARDBP-217ENST00000616545 MAP1LC3CQ9BXW4 147 aa7.94□□□□□ -1.14
TARDBP-217ENST00000616545 IGLV4-3A0A075B6K6 122 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 TRAV12-1A0A0B4J245 112 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 FABP4P15090 132 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 AKR1D1P51857 326 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 PMVKQ15126 192 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 SPATA12Q7Z6I5 190 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 AMELXQ99217 191 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
TARDBP-217ENST00000616545 TGP01266 2768 aa7.92□□□□□ -1.14
TARDBP-217ENST00000616545 IGLV4-60A0A075B6I1 120 aa7.92□□□□□ -1.14
TARDBP-217ENST00000616545 ANGP03950 147 aaKnown RBP7.92□□□□□ -1.14
TARDBP-217ENST00000616545 PRSS1P07477 247 aa7.92□□□□□ -1.14
TARDBP-217ENST00000616545 SEC11AP67812 179 aa7.92□□□□□ -1.14
TARDBP-217ENST00000616545 Q8N976 141 aa7.92□□□□□ -1.14
TARDBP-217ENST00000616545 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
TARDBP-217ENST00000616545 IGHV3-30P01768 117 aa7.91□□□□□ -1.14
TARDBP-217ENST00000616545 IGHV3-33P01772 117 aa7.91□□□□□ -1.14
TARDBP-217ENST00000616545 IGHV3-30-3P0DP02 117 aa7.91□□□□□ -1.14
TARDBP-217ENST00000616545 IGHV3-30-5P0DP03 117 aa7.91□□□□□ -1.14
TARDBP-217ENST00000616545 Q6ZUT4 128 aa7.91□□□□□ -1.14
TARDBP-217ENST00000616545 BAALCQ8WXS3 180 aa7.91□□□□□ -1.14
TARDBP-217ENST00000616545 TRAV8-3A0A0A6YYJ7 113 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 TRAV8-4A0A0B4J246 113 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 IFITM10A6NMD0 228 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 IBA57-AS1B1ANH7 110 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 CRPP02741 224 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 REG3AQ06141 175 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 MIAQ16674 131 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 PET117Q6UWS5 81 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 LINC00476Q8WZB0 136 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 FAM104AQ969W3 186 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 CST9LQ9H4G1 147 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 KLK12Q9UKR0 248 aa7.9□□□□□ -1.14
TARDBP-217ENST00000616545 C20orf202A1L168 122 aa7.89□□□□□ -1.15
TARDBP-217ENST00000616545 PRSS29PA6NIE9 313 aa7.89□□□□□ -1.15
TARDBP-217ENST00000616545 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
TARDBP-217ENST00000616545 SS18Q15532 418 aa7.89□□□□□ -1.15
TARDBP-217ENST00000616545 FAM19A3Q7Z5A8 133 aa7.89□□□□□ -1.15
TARDBP-217ENST00000616545 LINC00269Q8N2A0 174 aa7.89□□□□□ -1.15
TARDBP-217ENST00000616545 RMI2Q96E14 147 aa7.89□□□□□ -1.15
TARDBP-217ENST00000616545 C3orf79P0CE67 100 aa7.88□□□□□ -1.15
TARDBP-217ENST00000616545 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
TARDBP-217ENST00000616545 OPRPNQ99935 248 aaPredicted RBP7.88□□□□□ -1.15
TARDBP-217ENST00000616545 COX11Q9Y6N1 276 aa7.88□□□□□ -1.15
TARDBP-217ENST00000616545 NBDYA0A0U1RRE5 68 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 F8VRH5 84 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 LY6G6CO95867 125 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 UBE2D1P51668 147 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 KRTDAPP60985 99 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 OR10D4PQ8NGN7 298 aa7.87□□□□□ -1.15
TARDBP-217ENST00000616545 CHTOPQ9Y3Y2 248 aaKnown RBP7.87□□□□□ -1.15
TARDBP-217ENST00000616545 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 TINCRA0A1B0GVN0 87 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 PLNP26678 52 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 HERVK_113P63121 156 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 ODF1Q14990 250 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 ENHOQ6UWT2 76 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 NFE4Q86UQ8 179 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 Q8N3U1 123 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 UBE2WQ96B02 151 aa7.86□□□□□ -1.15
TARDBP-217ENST00000616545 IGLC3P0DOY3 106 aa7.85□□□□□ -1.15
TARDBP-217ENST00000616545 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
TARDBP-217ENST00000616545 C1orf43Q9BWL3 253 aa7.85□□□□□ -1.15
TARDBP-217ENST00000616545 TM2D2Q9BX73 214 aa7.85□□□□□ -1.15
TARDBP-217ENST00000616545 GEMIN7Q9H840 131 aaKnown RBP7.85□□□□□ -1.15
TARDBP-217ENST00000616545 DNAH7Q8WXX0 4024 aa7.84□□□□□ -1.15
TARDBP-217ENST00000616545 H0Y8G0 127 aa7.84□□□□□ -1.15
TARDBP-217ENST00000616545 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.15
TARDBP-217ENST00000616545 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
TARDBP-217ENST00000616545 LINC01561Q8N1V8 128 aa7.84□□□□□ -1.15
TARDBP-217ENST00000616545 IGLV5-45A0A087WSX0 123 aa7.83□□□□□ -1.16
TARDBP-217ENST00000616545 IGKV3OR2-268A0A0C4DH90 116 aa7.83□□□□□ -1.16
TARDBP-217ENST00000616545 DPM2O94777 84 aa7.83□□□□□ -1.16
TARDBP-217ENST00000616545 Q6ZR54 194 aa7.83□□□□□ -1.16
TARDBP-217ENST00000616545 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
TARDBP-217ENST00000616545 MRPL35Q9NZE8 188 aaKnown RBP7.83□□□□□ -1.16
TARDBP-217ENST00000616545 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
TARDBP-217ENST00000616545 A0A0J9YXV3 536 aa7.82□□□□□ -1.16
TARDBP-217ENST00000616545 LCE6AA0A183 80 aa7.82□□□□□ -1.16
TARDBP-217ENST00000616545 H3BRM9 83 aa7.82□□□□□ -1.16
TARDBP-217ENST00000616545 IGKCP01834 107 aa7.82□□□□□ -1.16
TARDBP-217ENST00000616545 JOSD1Q15040 202 aaPredicted RBP7.82□□□□□ -1.16
TARDBP-217ENST00000616545 ZC2HC1BQ5TFG8 222 aa7.82□□□□□ -1.16
TARDBP-217ENST00000616545 CLPSL2Q6UWE3 100 aa7.82□□□□□ -1.16
TARDBP-217ENST00000616545 CSMD3Q7Z407 3707 aa7.81□□□□□ -1.16
TARDBP-217ENST00000616545 IGHV3OR16-9A0A0B4J2B5 98 aa7.81□□□□□ -1.16
TARDBP-217ENST00000616545 CHAC1Q9BUX1 264 aa7.81□□□□□ -1.16
TARDBP-217ENST00000616545 IGKV2D-24A0A075B6R9 120 aa7.8□□□□□ -1.16
TARDBP-217ENST00000616545 A0A087WZ39 114 aa7.8□□□□□ -1.16
TARDBP-217ENST00000616545 C11orf86A6NJI1 115 aa7.8□□□□□ -1.16
TARDBP-217ENST00000616545 COX7A2LO14548 114 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms