RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 J3QLI3 93 aa9.21□□□□□ -0.94
MSH6-213ENST00000614496 NXPH4O95158 308 aa9.21□□□□□ -0.94
MSH6-213ENST00000614496 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
MSH6-213ENST00000614496 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
MSH6-213ENST00000614496 DOPEY1Q5JWR5 2465 aa9.2□□□□□ -0.94
MSH6-213ENST00000614496 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
MSH6-213ENST00000614496 Q9UF83 564 aa9.2□□□□□ -0.94
MSH6-213ENST00000614496 TRAV4A0A0B4J268 109 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 A0A096LPF7 62 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 BAALC-AS2P0C853 105 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 CLPSL2Q6UWE3 100 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 FAM19A4Q96LR4 140 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 Q6ZTI0 123 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 POM121L12Q8N7R1 296 aa9.19□□□□□ -0.94
MSH6-213ENST00000614496 ACANP16112 2415 aa9.18□□□□□ -0.94
MSH6-213ENST00000614496 NDUFA7O95182 113 aa9.18□□□□□ -0.94
MSH6-213ENST00000614496 HTN3P15516 51 aa9.18□□□□□ -0.94
MSH6-213ENST00000614496 PF4P02776 101 aa9.18□□□□□ -0.94
MSH6-213ENST00000614496 Q6ZSN1 163 aa9.18□□□□□ -0.94
MSH6-213ENST00000614496 DNAJC30Q96LL9 226 aa9.17□□□□□ -0.94
MSH6-213ENST00000614496 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
MSH6-213ENST00000614496 RBMY1BA6NDE4 496 aaKnown RBP9.17□□□□□ -0.94
MSH6-213ENST00000614496 RBMY1EA6NEQ0 496 aaKnown RBP9.17□□□□□ -0.94
MSH6-213ENST00000614496 RBMY1DP0C7P1 496 aaKnown RBP9.17□□□□□ -0.94
MSH6-213ENST00000614496 RBMY1A1P0DJD3 496 aaKnown RBP9.17□□□□□ -0.94
MSH6-213ENST00000614496 RBMY1CP0DJD4 496 aa9.17□□□□□ -0.94
MSH6-213ENST00000614496 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 TMEM89A2RUT3 159 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 UBE2D4Q9Y2X8 147 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 PYGO1Q9Y3Y4 419 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 H3BT86 120 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 K7EQD1 137 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 CCL24O00175 119 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
MSH6-213ENST00000614496 PRORYQ9H606 182 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 Q9HAA7 133 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 PIK3CD-AS1Q5SR53 167 aa9.16□□□□□ -0.94
MSH6-213ENST00000614496 RBMY1FQ15415 496 aaKnown RBP9.15□□□□□ -0.94
MSH6-213ENST00000614496 ZNF702PQ9H963 129 aa9.15□□□□□ -0.94
MSH6-213ENST00000614496 EPG5Q9HCE0 2579 aa9.15□□□□□ -0.95
MSH6-213ENST00000614496 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.95
MSH6-213ENST00000614496 LINC00308Q8TCZ7 52 aa9.14□□□□□ -0.95
MSH6-213ENST00000614496 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
MSH6-213ENST00000614496 H7C423 109 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 Q6YL49 198 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 CRLF1O75462 422 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 XCL1P47992 114 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 TMEM86BQ8N661 226 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 MIR7-3HGQ8N6C7 128 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 MALP21145 153 aa9.13□□□□□ -0.95
MSH6-213ENST00000614496 FAM236AA0A1B0GUQ0 79 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 FAM236BA0A1B0GV22 79 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 KLK9Q2XQG4 91 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 CHCHD7Q9BUK0 85 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 RELNP78509 3460 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 HIST1H4AP62805 103 aaKnown RBP9.12□□□□□ -0.95
MSH6-213ENST00000614496 COX6A2Q02221 97 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 EDA2RQ9HAV5 297 aa9.12□□□□□ -0.95
MSH6-213ENST00000614496 SMIM20Q8N5G0 67 aa9.11□□□□□ -0.95
MSH6-213ENST00000614496 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
MSH6-213ENST00000614496 DAZ2Q13117 558 aaKnown RBP9.11□□□□□ -0.95
MSH6-213ENST00000614496 DAZ4Q86SG3 579 aaKnown RBP9.11□□□□□ -0.95
MSH6-213ENST00000614496 RNF152Q8N8N0 203 aa9.11□□□□□ -0.95
MSH6-213ENST00000614496 AMELXQ99217 191 aa9.11□□□□□ -0.95
MSH6-213ENST00000614496 DAZ3Q9NR90 486 aaKnown RBP9.11□□□□□ -0.95
MSH6-213ENST00000614496 INAFM2P0DMQ5 153 aa9.11□□□□□ -0.95
MSH6-213ENST00000614496 SPANXDQ9BXN6 97 aa9.11□□□□□ -0.95
MSH6-213ENST00000614496 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
MSH6-213ENST00000614496 IGHV4-31P0DP07 118 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 C4orf3Q8WVX3 66 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 WFDC10AQ9H1F0 79 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 NDUFA1O15239 70 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 ATP5G1P05496 136 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 FHL3Q13643 280 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 ASH1LQ9NR48 2969 aaKnown RBP9.1□□□□□ -0.95
MSH6-213ENST00000614496 LST1O00453 97 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 BRI3O95415 125 aa9.1□□□□□ -0.95
MSH6-213ENST00000614496 CITED2Q99967 270 aaPredicted RBP9.1□□□□□ -0.95
MSH6-213ENST00000614496 LOC100131303A0A0U1RQF7 123 aa9.09□□□□□ -0.95
MSH6-213ENST00000614496 COX7A2LO14548 114 aa9.09□□□□□ -0.95
MSH6-213ENST00000614496 HERV-K104P63124 156 aa9.09□□□□□ -0.95
MSH6-213ENST00000614496 DEFB113Q30KQ7 82 aa9.09□□□□□ -0.95
MSH6-213ENST00000614496 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
MSH6-213ENST00000614496 ESM1Q9NQ30 184 aa9.09□□□□□ -0.95
MSH6-213ENST00000614496 SS18Q15532 418 aa9.09□□□□□ -0.96
MSH6-213ENST00000614496 TIRAPP58753 221 aa9.08□□□□□ -0.96
MSH6-213ENST00000614496 LINC00242Q5T6M2 205 aa9.08□□□□□ -0.96
MSH6-213ENST00000614496 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
MSH6-213ENST00000614496 IGLV10-54A0A075B6I4 117 aa9.07□□□□□ -0.96
MSH6-213ENST00000614496 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
MSH6-213ENST00000614496 COL12A1Q99715 3063 aa9.07□□□□□ -0.96
MSH6-213ENST00000614496 LECT2O14960 151 aa9.07□□□□□ -0.96
MSH6-213ENST00000614496 CSMD1Q96PZ7 3565 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms