RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 VSIG2Q96IQ7 327 aa8.19□□□□□ -1.1
ATF3-211ENST00000613954 FAM240AA0A1B0GVK7 77 aa8.18□□□□□ -1.1
ATF3-211ENST00000613954 H7C423 109 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 RNASE1P07998 156 aaKnown RBP8.17□□□□□ -1.1
ATF3-211ENST00000613954 NHLRC4P0CG21 123 aaPredicted RBP8.17□□□□□ -1.1
ATF3-211ENST00000613954 HECTD1Q9ULT8 2610 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 FASNP49327 2511 aaKnown RBP8.17□□□□□ -1.1
ATF3-211ENST00000613954 TRAV8-3A0A0A6YYJ7 113 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 GAGE12JA6NER3 117 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 ADARB2-AS1A8MUL3 147 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 LST1O00453 97 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 GAGE7O76087 117 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 GAGE4Q13068 117 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 C15orf53Q8NAA6 179 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 FAM104AQ969W3 186 aa8.17□□□□□ -1.1
ATF3-211ENST00000613954 ZNF469Q96JG9 3925 aaPredicted RBP8.16□□□□□ -1.1
ATF3-211ENST00000613954 CRLF1O75462 422 aa8.16□□□□□ -1.1
ATF3-211ENST00000613954 LY6G6DO95868 133 aa8.16□□□□□ -1.1
ATF3-211ENST00000613954 HOXD3P31249 432 aaPredicted RBP8.16□□□□□ -1.1
ATF3-211ENST00000613954 ADAMTSL4-AS1Q5T5F5 129 aa8.16□□□□□ -1.1
ATF3-211ENST00000613954 TMEM61Q8N0U2 210 aa8.16□□□□□ -1.1
ATF3-211ENST00000613954 SMR3AQ99954 134 aa8.16□□□□□ -1.1
ATF3-211ENST00000613954 TLN2Q9Y4G6 2542 aa8.16□□□□□ -1.1
ATF3-211ENST00000613954 C4orf3Q8WVX3 66 aa8.15□□□□□ -1.1
ATF3-211ENST00000613954 UBE2D4Q9Y2X8 147 aa8.15□□□□□ -1.1
ATF3-211ENST00000613954 B5MCH6 92 aa8.15□□□□□ -1.11
ATF3-211ENST00000613954 SYNJ2BPP57105 145 aa8.15□□□□□ -1.11
ATF3-211ENST00000613954 HILS1P60008 231 aa8.15□□□□□ -1.11
ATF3-211ENST00000613954 CIRBPQ14011 172 aaKnown RBP8.15□□□□□ -1.11
ATF3-211ENST00000613954 COPS9Q8WXC6 57 aa8.15□□□□□ -1.11
ATF3-211ENST00000613954 DNAJC30Q96LL9 226 aa8.15□□□□□ -1.11
ATF3-211ENST00000613954 C16orf95Q9H693 158 aa8.15□□□□□ -1.11
ATF3-211ENST00000613954 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
ATF3-211ENST00000613954 CHCHD7Q9BUK0 85 aa8.14□□□□□ -1.11
ATF3-211ENST00000613954 NDUFA1O15239 70 aa8.13□□□□□ -1.11
ATF3-211ENST00000613954 TIRAPP58753 221 aa8.13□□□□□ -1.11
ATF3-211ENST00000613954 ZNF415Q09FC8 603 aa8.13□□□□□ -1.11
ATF3-211ENST00000613954 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
ATF3-211ENST00000613954 C18orf65Q6ZTR6 163 aa8.13□□□□□ -1.11
ATF3-211ENST00000613954 SONP18583 2426 aaKnown RBP8.13□□□□□ -1.11
ATF3-211ENST00000613954 CEMP1Q6PRD7 247 aaPredicted RBP8.13□□□□□ -1.11
ATF3-211ENST00000613954 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
ATF3-211ENST00000613954 IGLV5-45A0A087WSX0 123 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 WIPF1O43516 503 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 ACYP1P07311 99 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 DEFB136Q30KP8 78 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 TMEM126AQ9H061 195 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 ACANP16112 2415 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 A8MTW9 85 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 SLURP1P55000 103 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 DUX3Q96PT4 197 aa8.12□□□□□ -1.11
ATF3-211ENST00000613954 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
ATF3-211ENST00000613954 RBMY1A1P0DJD3 496 aaKnown RBP8.11□□□□□ -1.11
ATF3-211ENST00000613954 RBMY1CP0DJD4 496 aa8.11□□□□□ -1.11
ATF3-211ENST00000613954 PROK1P58294 105 aa8.11□□□□□ -1.11
ATF3-211ENST00000613954 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
ATF3-211ENST00000613954 RNASE13Q5GAN3 156 aaKnown RBP8.11□□□□□ -1.11
ATF3-211ENST00000613954 LINC01006Q8NI28 216 aa8.11□□□□□ -1.11
ATF3-211ENST00000613954 NDUFA7O95182 113 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 HTN1P15515 57 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 NPC2P61916 151 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 PEMTQ9UBM1 199 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 ANK3Q12955 4377 aaKnown RBP8.1□□□□□ -1.11
ATF3-211ENST00000613954 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.1□□□□□ -1.11
ATF3-211ENST00000613954 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 IGKV2-29A2NJV5 120 aaPredicted RBP8.1□□□□□ -1.11
ATF3-211ENST00000613954 A8MZ25 164 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 CCDC179H3BU77 68 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 IGHV3-53P01767 116 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 HERVK_113P63121 156 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 LINC00467Q9BRT7 94 aa8.1□□□□□ -1.11
ATF3-211ENST00000613954 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
ATF3-211ENST00000613954 IMUPQ9GZP8 106 aa8.09□□□□□ -1.11
ATF3-211ENST00000613954 CDKN2A-AS1Q9UH64 79 aa8.09□□□□□ -1.11
ATF3-211ENST00000613954 COX7A2LO14548 114 aa8.08□□□□□ -1.12
ATF3-211ENST00000613954 TMEM101Q96IK0 257 aa8.08□□□□□ -1.12
ATF3-211ENST00000613954 IGLV5-39A0A0G2JS06 123 aa8.08□□□□□ -1.12
ATF3-211ENST00000613954 KNCNA6PVL3 124 aa8.08□□□□□ -1.12
ATF3-211ENST00000613954 DEFB131AP59861 70 aa8.08□□□□□ -1.12
ATF3-211ENST00000613954 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
ATF3-211ENST00000613954 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
ATF3-211ENST00000613954 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 INAFM1C9JVW0 142 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 BEAN1Q3B7T3 259 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 C11orf44Q8N8P7 122 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 PPDPFQ9H3Y8 114 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 HIVEP2P31629 2446 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 A0A1W2PRX2 142 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 RS1O15537 224 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 HIST2H2BDQ6DRA6 164 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 Q6ZSN1 163 aa8.07□□□□□ -1.12
ATF3-211ENST00000613954 CCL24O00175 119 aa8.06□□□□□ -1.12
ATF3-211ENST00000613954 Q9H8V8 135 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms