RNA–Protein interactions for RNA: ENST00000613691.1

LINC01549-202, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 5

Gene LINC01549, Length 219 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-202ENST00000613691 SNCGO76070 127 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 NDUFB6O95139 128 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 GUCA1AP43080 201 aaPredicted RBP0.28□□□□□ -2.36
LINC01549-202ENST00000613691 SELENOWP63302 87 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 KRTAP21-1Q3LI58 79 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 RPL13AP3Q6NVV1 102 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 SCIMPQ6UWF3 145 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 C4orf33Q8N1A6 199 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 Q8N8P6 123 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.28□□□□□ -2.36
LINC01549-202ENST00000613691 COX7B2Q8TF08 81 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 DSCR8Q96T75 97 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 AGPAT4-IT1Q9H0P7 198 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 RPRMQ9NS64 109 aa0.28□□□□□ -2.36
LINC01549-202ENST00000613691 PAIP2BQ9ULR5 123 aaKnown RBP0.28□□□□□ -2.36
LINC01549-202ENST00000613691 CENPFP49454 3210 aa0.28□□□□□ -2.37
LINC01549-202ENST00000613691 ZNF518AQ6AHZ1 1483 aa0.28□□□□□ -2.37
LINC01549-202ENST00000613691 MYO15AQ9UKN7 3530 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 LAMA1P25391 3075 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 SPHKAPQ2M3C7 1700 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 MYH4Q9Y623 1939 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 SPENQ96T58 3664 aaKnown RBP0.27□□□□□ -2.37
LINC01549-202ENST00000613691 TRGV1A0A0A0MS02 117 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 FAM92AA1XBS5 289 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 MIF4GDA9UHW6 222 aaKnown RBP0.27□□□□□ -2.37
LINC01549-202ENST00000613691 PIPP12273 146 aaPredicted RBP0.27□□□□□ -2.37
LINC01549-202ENST00000613691 SPINK13Q1W4C9 94 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 RPL7L1Q6DKI1 246 aaKnown RBP0.27□□□□□ -2.37
LINC01549-202ENST00000613691 COA4Q9NYJ1 87 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 BET1LQ9NYM9 111 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 CCDC167Q9P0B6 97 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
LINC01549-202ENST00000613691 NHSL1Q5SYE7 1610 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 TOPAZ1Q8N9V7 1692 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 NUP188Q5SRE5 1749 aa0.27□□□□□ -2.37
LINC01549-202ENST00000613691 CSMD2Q7Z408 3487 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 ITPR2Q14571 2701 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 NF1P21359 2839 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 CRYBG3Q68DQ2 2970 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 GVQW2A0A096LPI5 108 aaPredicted RBP0.26□□□□□ -2.37
LINC01549-202ENST00000613691 TRBV7-1A0A0A6YYK4 115 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 TRBV10-3A0A0K0K1G6 114 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 MCRIP1C9JLW8 97 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 CBLN1P23435 193 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 EDDM3BP56851 147 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 SSBP1Q04837 148 aaKnown RBP0.26□□□□□ -2.37
LINC01549-202ENST00000613691 CATR1Q13166 79 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 LELP1Q5T871 98 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 Q6AWC8 147 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 NDUFA11Q86Y39 141 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 TSLPQ969D9 159 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 RERGLQ9H628 205 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 SCN3BQ9NY72 215 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 LINC00312Q9Y6C7 94 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 SERP1Q9Y6X1 66 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 DAPK1P53355 1430 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 NCOA3Q9Y6Q9 1424 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 A2ML1A8K2U0 1454 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 MYOM2P54296 1465 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 ZMYM4Q5VZL5 1548 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 NRKQ7Z2Y5 1582 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 LAMC3Q9Y6N6 1575 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 RIMS1Q86UR5 1692 aaKnown RBP0.26□□□□□ -2.37
LINC01549-202ENST00000613691 TSC2P49815 1807 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 CNOT1A5YKK6 2376 aaKnown RBP0.26□□□□□ -2.37
LINC01549-202ENST00000613691 SPTAN1Q13813 2472 aaKnown RBP0.26□□□□□ -2.37
LINC01549-202ENST00000613691 LRBAP50851 2863 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 HSPG2P98160 4391 aa0.26□□□□□ -2.37
LINC01549-202ENST00000613691 CUBNO60494 3623 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 DNAJC13O75165 2243 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 ANKRD26Q9UPS8 1709 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 LAMC1P11047 1609 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 TOP2BQ02880 1626 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 CICQ96RK0 1608 aaPredicted RBP0.25□□□□□ -2.37
LINC01549-202ENST00000613691 MRC1P22897 1456 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 IFT140Q96RY7 1462 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 TRAV13-2A0A0B4J235 113 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 RBAKDNA6NC62 111 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 A6NIN4 97 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 OOSP1A8MZH6 123 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 HCG22E2RYF7 251 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 SNAPC5O75971 98 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 APODP05090 189 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 ACYP2P14621 99 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 FAM74A4Q5TZK3 123 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 SNRNP25Q9BV90 132 aaKnown RBP0.25□□□□□ -2.37
LINC01549-202ENST00000613691 V9GYV3 84 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 UTRNP46939 3433 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 CFAP54Q96N23 3096 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 FAM186AA6NE01 2351 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 LRP2P98164 4655 aa0.25□□□□□ -2.37
LINC01549-202ENST00000613691 CHD9Q3L8U1 2897 aa0.24□□□□□ -2.37
LINC01549-202ENST00000613691 MYOM1P52179 1685 aa0.24□□□□□ -2.37
LINC01549-202ENST00000613691 CDK13Q14004 1512 aaKnown RBP0.24□□□□□ -2.37
LINC01549-202ENST00000613691 CPSF1Q10570 1443 aaKnown RBP0.24□□□□□ -2.37
LINC01549-202ENST00000613691 TRAV1-2A0A0B4J238 106 aa0.24□□□□□ -2.37
LINC01549-202ENST00000613691 EFCAB10A6NFE3 127 aa0.24□□□□□ -2.37
LINC01549-202ENST00000613691 F2Z2F3 143 aa0.24□□□□□ -2.37
LINC01549-202ENST00000613691 G3V318 75 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms