RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.33□□□□□ -1.561e-6■■■■□ 25.8
PPARGC1A-217ENST00000613098 USP9XQ93008 2570 aaPredicted RBP5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 PKD1L2Q7Z442 2459 aa5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 TIRAPP58753 221 aa5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 C15orf53Q8NAA6 179 aa5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 UBE2WQ96B02 151 aa5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 SS18L2Q9UHA2 77 aa5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 TNFRSF18Q9Y5U5 241 aa5.33□□□□□ -1.56
PPARGC1A-217ENST00000613098 SHISA2Q6UWI4 295 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 SPG11Q96JI7 2443 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 F5H768 121 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 H3BT86 120 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 RS1O15537 224 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 Q6YL49 198 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 LINC00308Q8TCZ7 52 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 Q96MF0 132 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 FAM208BQ5VWN6 2430 aa5.32□□□□□ -1.56
PPARGC1A-217ENST00000613098 TRAV8-4A0A0B4J246 113 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 B5MCH6 92 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 GAGE5Q13069 117 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 GAGE6Q13070 117 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 TTC32Q5I0X7 151 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 ZNF625Q96I27 306 aaPredicted RBP5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 MAP6D1Q9H9H5 199 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 SMIM1B2RUZ4 78 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 SDIM1Q6ZPB5 146 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 FAM218AQ96MZ4 157 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 VPREB3Q9UKI3 123 aa5.31□□□□□ -1.56
PPARGC1A-217ENST00000613098 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
PPARGC1A-217ENST00000613098 FAM240AA0A1B0GVK7 77 aa5.3□□□□□ -1.56
PPARGC1A-217ENST00000613098 SNCGO76070 127 aa5.3□□□□□ -1.56
PPARGC1A-217ENST00000613098 IFITM1P13164 125 aa5.3□□□□□ -1.56
PPARGC1A-217ENST00000613098 DNAJC30Q96LL9 226 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 Q9H8V8 135 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 ZNF415Q09FC8 603 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 DOPEY1Q5JWR5 2465 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 IGSF10Q6WRI0 2623 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 TRBV7-7A0A0K0K1E9 115 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 DEFB114Q30KQ6 69 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 ODF3L2Q3SX64 289 aa5.29□□□□□ -1.56
PPARGC1A-217ENST00000613098 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
PPARGC1A-217ENST00000613098 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
PPARGC1A-217ENST00000613098 GIG44P09565 113 aaPredicted RBP5.28□□□□□ -1.56
PPARGC1A-217ENST00000613098 LINC01587Q99440 93 aa5.28□□□□□ -1.56
PPARGC1A-217ENST00000613098 CR1P17927 2039 aa5.28□□□□□ -1.56
PPARGC1A-217ENST00000613098 PLAC8L1A1L4L8 177 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 COX7A2LO14548 114 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 MRPL23Q16540 153 aaKnown RBP5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 C9orf129Q5T035 196 aaKnown RBP5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 CSDC2Q9Y534 153 aaKnown RBP5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 CHD6Q8TD26 2715 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 YAE1D1Q9NRH1 226 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 ANK3Q12955 4377 aaKnown RBP5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 POLQO75417 2590 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 IGKV2-28A0A075B6P5 120 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 GAGE12JA6NER3 117 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 GAGE7O76087 117 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 IGKV2D-28P01615 120 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 GAGE12FP0CL80 117 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 GAGE12GP0CL81 117 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 GAGE12IP0CL82 117 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 IGHV4-31P0DP07 118 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 GAGE4Q13068 117 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 SPATA3Q8NHX4 192 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 CHCHD5Q9BSY4 110 aa5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 USP9YO00507 2555 aaPredicted RBP5.27□□□□□ -1.57
PPARGC1A-217ENST00000613098 COX6CP09669 75 aa5.26□□□□□ -1.57
PPARGC1A-217ENST00000613098 XCL2Q9UBD3 114 aa5.26□□□□□ -1.57
PPARGC1A-217ENST00000613098 HERVK_113P63121 156 aa5.26□□□□□ -1.57
PPARGC1A-217ENST00000613098 Q6ZTI0 123 aa5.26□□□□□ -1.57
PPARGC1A-217ENST00000613098 C4orf3Q8WVX3 66 aa5.26□□□□□ -1.57
PPARGC1A-217ENST00000613098 SETXQ7Z333 2677 aaKnown RBP5.26□□□□□ -1.57
PPARGC1A-217ENST00000613098 CENPEQ02224 2701 aa5.26□□□□□ -1.57
PPARGC1A-217ENST00000613098 NF1P21359 2839 aa5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 J3QLI3 93 aa5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 TRAV13-1A0A0B4J241 112 aa5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 KRTAP10-9P60411 292 aa5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 DAZ2Q13117 558 aaKnown RBP5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 DAZ4Q86SG3 579 aaKnown RBP5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 LINC00337Q8N6G1 96 aa5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 DAZ3Q9NR90 486 aaKnown RBP5.25□□□□□ -1.57
PPARGC1A-217ENST00000613098 LOC100131303A0A0U1RQF7 123 aa5.24□□□□□ -1.57
PPARGC1A-217ENST00000613098 INSP01308 110 aa5.24□□□□□ -1.57
PPARGC1A-217ENST00000613098 DSCR9P59020 149 aa5.24□□□□□ -1.57
PPARGC1A-217ENST00000613098 CREBBPQ92793 2442 aa5.24□□□□□ -1.57
PPARGC1A-217ENST00000613098 PPDPFQ9H3Y8 114 aa5.24□□□□□ -1.57
PPARGC1A-217ENST00000613098 K7EQD1 137 aa5.23□□□□□ -1.57
PPARGC1A-217ENST00000613098 UBR5O95071 2799 aaPredicted RBP5.23□□□□□ -1.57
PPARGC1A-217ENST00000613098 TRGV1A0A0A0MS02 117 aa5.23□□□□□ -1.57
PPARGC1A-217ENST00000613098 TRACP01848 142 aa5.23□□□□□ -1.57
PPARGC1A-217ENST00000613098 KRTAP1-3Q8IUG1 177 aa5.23□□□□□ -1.57
PPARGC1A-217ENST00000613098 PRIMA1Q86XR5 153 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms