RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PKIAP61925 76 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 FAM104BQ5XKR9 115 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 RPS10P5Q9NQ39 176 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 IGHV3-38A0A0C4DH36 116 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TRBV6-5A0A0K0K1A5 114 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 SCO1O75880 301 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 PPBPP02775 128 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 CAMPP49913 170 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 COX19Q49B96 90 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 LINC01556Q5JQF7 62 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 OR10J3Q5JRS4 329 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 MRPL54Q6P161 138 aaKnown RBP4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 AMN1Q8IY45 258 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 RNF185Q96GF1 192 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 CHCHD7Q9BUK0 85 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 Q9UF83 564 aa4.64□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TRBV24-1A0A075B6N3 115 aa4.63□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TRBV6-8A0A0A6YYG3 113 aa4.63□□□□□ -1.67
PTCHD3P1-201ENST00000612350 PHOX2AO14813 284 aa4.63□□□□□ -1.67
PTCHD3P1-201ENST00000612350 NCR2O95944 276 aa4.63□□□□□ -1.67
PTCHD3P1-201ENST00000612350 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
PTCHD3P1-201ENST00000612350 ST20Q9HBF5 79 aa4.63□□□□□ -1.67
PTCHD3P1-201ENST00000612350 LAMTOR2Q9Y2Q5 125 aa4.63□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TRBV25-1A0A075B6N4 114 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TRAV26-2A0A0B4J265 109 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 IGHV1-24A0A0C4DH33 117 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 SDHAF1A6NFY7 115 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 I3L3M4 83 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 LECT2O14960 151 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TCAPO15273 167 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 CKS2P33552 79 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 RPL32P62910 135 aaKnown RBP4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 COTL1Q14019 142 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 ELOBQ15370 118 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 IQCJQ1A5X6 159 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 MRPL51Q4U2R6 128 aaKnown RBP4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 C20orf78Q9BR46 151 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 Q9HAA7 133 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 URGCP-MRPS24S4R325 110 aa4.62□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TRBV27A0A0K0K1C4 114 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 H7C423 109 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 VCYO14598 125 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 HLA-DQA1P01909 254 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 MT-ND6P03923 174 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 PMCHP20382 165 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 POLR2KP53803 58 aaKnown RBP4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 LAGE3Q14657 143 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 ATRAIDQ6UW56 229 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 NIT1Q86X76 327 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 ORMDL3Q8N138 153 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 RPL39LQ96EH5 51 aaKnown RBP4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 GNB1LQ9BYB4 327 aa4.61□□□□□ -1.67
PTCHD3P1-201ENST00000612350 A0A087WX48 190 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 A0A1B0GUV1 79 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 D6R8Y8 96 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TMEM136Q6ZRR5 245 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 NTM-AS1Q6ZSK4 140 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 CBLN2Q8IUK8 224 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 NRACQ8N912 160 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 KIR2DL4Q99706 377 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 CHCHD5Q9BSY4 110 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TMEM243Q9BU79 118 aa4.6□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TRAV8-3A0A0A6YYJ7 113 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 A0A0J9YXV3 536 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 C1orf196B1AJZ1 125 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TMEM262E9PQX1 116 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 UBE2L6O14933 153 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TNFRSF6BO95407 300 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 APCSP02743 223 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 RPS10P46783 165 aaKnown RBP4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 AMTP48728 403 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 RAB5BP61020 215 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 SMAGPQ0VAQ4 97 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 Q0VG73 95 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 PRELID3AQ96N28 172 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 TM2D2Q9BX73 214 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 COX11Q9Y6N1 276 aa4.59□□□□□ -1.67
PTCHD3P1-201ENST00000612350 SMKR1H3BMG3 65 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 K7EMI3 77 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGHV3-30P01768 117 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGHV3-33P01772 117 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGHV3-30-3P0DP02 117 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 IGHV3-30-5P0DP03 117 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 ZNF25P17030 456 aaPredicted RBP4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 FCER1GP30273 86 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 BAALCQ8WXS3 180 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 TMEM18Q96B42 140 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 RMI2Q96E14 147 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 SMIM2Q9BVW6 85 aa4.58□□□□□ -1.68
PTCHD3P1-201ENST00000612350 TSHBP01222 138 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 NPYP01303 97 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 S100A6P06703 90 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 ESDP10768 282 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 RAB5AP20339 215 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 G0S2P27469 103 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 MPV17L2Q567V2 206 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
PTCHD3P1-201ENST00000612350 Q8N976 141 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms