RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 ESM1Q9NQ30 184 aa13.96□□□□□ -0.17
SEMA3B-210ENST00000611067 IGHV1-58A0A0C4DH39 117 aa13.95□□□□□ -0.18
SEMA3B-210ENST00000611067 CD28P10747 220 aa13.95□□□□□ -0.18
SEMA3B-210ENST00000611067 Q6ZSV7 163 aa13.95□□□□□ -0.18
SEMA3B-210ENST00000611067 FAM104AQ969W3 186 aa13.95□□□□□ -0.18
SEMA3B-210ENST00000611067 SMR3AQ99954 134 aa13.95□□□□□ -0.18
SEMA3B-210ENST00000611067 TRAV8-3A0A0A6YYJ7 113 aa13.94□□□□□ -0.18
SEMA3B-210ENST00000611067 ADAMTSL4-AS1Q5T5F5 129 aa13.94□□□□□ -0.18
SEMA3B-210ENST00000611067 MIAQ16674 131 aa13.94□□□□□ -0.18
SEMA3B-210ENST00000611067 NDUFA12Q9UI09 145 aa13.94□□□□□ -0.18
SEMA3B-210ENST00000611067 SPANXA1Q9NS26 97 aa13.93□□□□□ -0.18
SEMA3B-210ENST00000611067 FAM240AA0A1B0GVK7 77 aa13.93□□□□□ -0.18
SEMA3B-210ENST00000611067 IGKV3-20P01619 116 aa13.93□□□□□ -0.18
SEMA3B-210ENST00000611067 EDA2RQ9HAV5 297 aa13.93□□□□□ -0.18
SEMA3B-210ENST00000611067 HIVEP2P31629 2446 aa13.93□□□□□ -0.18
SEMA3B-210ENST00000611067 MTORP42345 2549 aa13.92□□□□□ -0.18
SEMA3B-210ENST00000611067 LST1O00453 97 aa13.92□□□□□ -0.18
SEMA3B-210ENST00000611067 DEFB121Q5J5C9 76 aa13.92□□□□□ -0.18
SEMA3B-210ENST00000611067 LY6G6DO95868 133 aa13.91□□□□□ -0.18
SEMA3B-210ENST00000611067 KHDC1LQ5JSQ8 128 aa13.91□□□□□ -0.18
SEMA3B-210ENST00000611067 VSIG2Q96IQ7 327 aa13.91□□□□□ -0.18
SEMA3B-210ENST00000611067 RNASE1P07998 156 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-210ENST00000611067 SNRPD3P62318 126 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-210ENST00000611067 SPINK13Q1W4C9 94 aa13.9□□□□□ -0.18
SEMA3B-210ENST00000611067 TINCRA0A1B0GVN0 87 aa13.89□□□□□ -0.19
SEMA3B-210ENST00000611067 TMEM61Q8N0U2 210 aa13.89□□□□□ -0.19
SEMA3B-210ENST00000611067 CLEC2BQ92478 149 aa13.89□□□□□ -0.19
SEMA3B-210ENST00000611067 TRGV11A0A075B6L2 103 aa13.89□□□□□ -0.19
SEMA3B-210ENST00000611067 HOXD3P31249 432 aaPredicted RBP13.89□□□□□ -0.19
SEMA3B-210ENST00000611067 SYNJ2BPP57105 145 aa13.88□□□□□ -0.19
SEMA3B-210ENST00000611067 HILS1P60008 231 aa13.88□□□□□ -0.19
SEMA3B-210ENST00000611067 CEMP1Q6PRD7 247 aaPredicted RBP13.88□□□□□ -0.19
SEMA3B-210ENST00000611067 K7EQG2 157 aa13.87□□□□□ -0.19
SEMA3B-210ENST00000611067 TIMM17BO60830 172 aa13.87□□□□□ -0.19
SEMA3B-210ENST00000611067 NPC2P61916 151 aa13.87□□□□□ -0.19
SEMA3B-210ENST00000611067 C4orf3Q8WVX3 66 aa13.87□□□□□ -0.19
SEMA3B-210ENST00000611067 DUX3Q96PT4 197 aa13.87□□□□□ -0.19
SEMA3B-210ENST00000611067 RNASE13Q5GAN3 156 aaKnown RBP13.86□□□□□ -0.19
SEMA3B-210ENST00000611067 DEFB136Q30KP8 78 aa13.85□□□□□ -0.19
SEMA3B-210ENST00000611067 C18orf65Q6ZTR6 163 aa13.85□□□□□ -0.19
SEMA3B-210ENST00000611067 OTOGQ6ZRI0 2925 aa13.85□□□□□ -0.19
SEMA3B-210ENST00000611067 A8MZ25 164 aa13.85□□□□□ -0.19
SEMA3B-210ENST00000611067 TRBV7-7A0A0K0K1E9 115 aa13.84□□□□□ -0.19
SEMA3B-210ENST00000611067 TNFRSF18Q9Y5U5 241 aa13.84□□□□□ -0.19
SEMA3B-210ENST00000611067 ANK3Q12955 4377 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-210ENST00000611067 UBE2D4Q9Y2X8 147 aa13.84□□□□□ -0.19
SEMA3B-210ENST00000611067 IGHV3-73A0A0B4J1V6 119 aa13.83□□□□□ -0.2
SEMA3B-210ENST00000611067 PROK1P58294 105 aa13.83□□□□□ -0.2
SEMA3B-210ENST00000611067 FAM110AQ9BQ89 295 aa13.83□□□□□ -0.2
SEMA3B-210ENST00000611067 CHCHD7Q9BUK0 85 aa13.83□□□□□ -0.2
SEMA3B-210ENST00000611067 C16orf95Q9H693 158 aa13.83□□□□□ -0.2
SEMA3B-210ENST00000611067 SLURP1P55000 103 aa13.82□□□□□ -0.2
SEMA3B-210ENST00000611067 LINC01006Q8NI28 216 aa13.82□□□□□ -0.2
SEMA3B-210ENST00000611067 CUBNO60494 3623 aa13.81□□□□□ -0.2
SEMA3B-210ENST00000611067 MEIG1Q5JSS6 88 aa13.81□□□□□ -0.2
SEMA3B-210ENST00000611067 NF1P21359 2839 aa13.81□□□□□ -0.2
SEMA3B-210ENST00000611067 C11orf44Q8N8P7 122 aa13.8□□□□□ -0.2
SEMA3B-210ENST00000611067 PEMTQ9UBM1 199 aa13.8□□□□□ -0.2
SEMA3B-210ENST00000611067 INAFM1C9JVW0 142 aa13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 NDUFA1O15239 70 aa13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 RBMY1A1P0DJD3 496 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 RBMY1CP0DJD4 496 aa13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 RBMY1FQ15415 496 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 CITED2Q99967 270 aaPredicted RBP13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 ACYP1P07311 99 aa13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 SMIM20Q8N5G0 67 aa13.79□□□□□ -0.2
SEMA3B-210ENST00000611067 DAND5Q8N907 189 aa13.78□□□□□ -0.2
SEMA3B-210ENST00000611067 TMEM101Q96IK0 257 aa13.78□□□□□ -0.2
SEMA3B-210ENST00000611067 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
SEMA3B-210ENST00000611067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.78□□□□□ -0.2
SEMA3B-210ENST00000611067 IGKV2-29A2NJV5 120 aaPredicted RBP13.78□□□□□ -0.2
SEMA3B-210ENST00000611067 HIST2H2BDQ6DRA6 164 aa13.78□□□□□ -0.2
SEMA3B-210ENST00000611067 TIRAPP58753 221 aa13.77□□□□□ -0.21
SEMA3B-210ENST00000611067 CIRBPQ14011 172 aaKnown RBP13.77□□□□□ -0.21
SEMA3B-210ENST00000611067 IMUPQ9GZP8 106 aa13.77□□□□□ -0.21
SEMA3B-210ENST00000611067 CDKN2A-AS1Q9UH64 79 aa13.77□□□□□ -0.21
SEMA3B-210ENST00000611067 IGLV5-45A0A087WSX0 123 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 A0A1W2PRX2 142 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 NDUFA7O95182 113 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 LINC00467Q9BRT7 94 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 Q9UF83 564 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 HTN1P15515 57 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 PIK3CD-AS1Q5SR53 167 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 NACAE9PAV3 2078 aa13.76□□□□□ -0.21
SEMA3B-210ENST00000611067 KNCNA6PVL3 124 aa13.75□□□□□ -0.21
SEMA3B-210ENST00000611067 COX7A2LO14548 114 aa13.75□□□□□ -0.21
SEMA3B-210ENST00000611067 Q6ZSN1 163 aa13.75□□□□□ -0.21
SEMA3B-210ENST00000611067 LINC00308Q8TCZ7 52 aa13.75□□□□□ -0.21
SEMA3B-210ENST00000611067 HERV-K104P63124 156 aa13.74□□□□□ -0.21
SEMA3B-210ENST00000611067 SETD2Q9BYW2 2564 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-210ENST00000611067 SORL1Q92673 2214 aa13.73□□□□□ -0.21
SEMA3B-210ENST00000611067 DNAJC30Q96LL9 226 aa13.73□□□□□ -0.21
SEMA3B-210ENST00000611067 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-210ENST00000611067 DYNLRB2Q8TF09 96 aa13.72□□□□□ -0.21
SEMA3B-210ENST00000611067 TMEM126AQ9H061 195 aa13.72□□□□□ -0.21
SEMA3B-210ENST00000611067 NSD1Q96L73 2696 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-210ENST00000611067 CCL24O00175 119 aa13.71□□□□□ -0.21
SEMA3B-210ENST00000611067 FLNBO75369 2602 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-210ENST00000611067 SHISA2Q6UWI4 295 aa13.71□□□□□ -0.21
SEMA3B-210ENST00000611067 LINC01587Q99440 93 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms