RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 TIMM17BO60830 172 aa7.48□□□□□ -1.21
PABPC1-224ENST00000610907 Q6ZTI0 123 aa7.48□□□□□ -1.21
PABPC1-224ENST00000610907 Q6ZUT4 128 aa7.48□□□□□ -1.21
PABPC1-224ENST00000610907 RNF183Q96D59 192 aa7.48□□□□□ -1.21
PABPC1-224ENST00000610907 GTSF1LQ9H1H1 148 aa7.48□□□□□ -1.21
PABPC1-224ENST00000610907 PRO0461Q9UI25 63 aa7.48□□□□□ -1.21
PABPC1-224ENST00000610907 CCDC168Q8NDH2 2452 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 IGHV3-64A0A075B6Q5 118 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 A4D1N5 150 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 PCP4P48539 62 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 HERVK_113P63121 156 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 WFDC2Q14508 124 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 ZFAND6Q6FIF0 208 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 CSNK1G2-AS1Q8NCQ2 148 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 SPANXDQ9BXN6 97 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 SPANXCQ9NY87 97 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 NDUFA12Q9UI09 145 aa7.47□□□□□ -1.21
PABPC1-224ENST00000610907 PDZD2O15018 2839 aa7.46□□□□□ -1.21
PABPC1-224ENST00000610907 LOC107984156A0A0G2JMH3 177 aa7.46□□□□□ -1.21
PABPC1-224ENST00000610907 TRBV6-4A0A1B0GX49 114 aa7.46□□□□□ -1.21
PABPC1-224ENST00000610907 H7C423 109 aa7.46□□□□□ -1.21
PABPC1-224ENST00000610907 ARL17AQ8IVW1 177 aa7.46□□□□□ -1.21
PABPC1-224ENST00000610907 NOP10Q9NPE3 64 aaKnown RBP7.46□□□□□ -1.21
PABPC1-224ENST00000610907 TEX48A0A1B0GUV7 120 aa7.46□□□□□ -1.22
PABPC1-224ENST00000610907 PLAC8L1A1L4L8 177 aa7.46□□□□□ -1.22
PABPC1-224ENST00000610907 RNASE13Q5GAN3 156 aaKnown RBP7.46□□□□□ -1.22
PABPC1-224ENST00000610907 SBSPONQ8IVN8 264 aa7.46□□□□□ -1.22
PABPC1-224ENST00000610907 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.22
PABPC1-224ENST00000610907 LITAFQ99732 161 aa7.46□□□□□ -1.22
PABPC1-224ENST00000610907 ZNF469Q96JG9 3925 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-224ENST00000610907 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
PABPC1-224ENST00000610907 IGHV3-33P01772 117 aa7.45□□□□□ -1.22
PABPC1-224ENST00000610907 IFITM1P13164 125 aa7.45□□□□□ -1.22
PABPC1-224ENST00000610907 ERG28Q9UKR5 140 aa7.45□□□□□ -1.22
PABPC1-224ENST00000610907 WNK1Q9H4A3 2382 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 TRGV2A0A075B6R0 118 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 NDUFA1O15239 70 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 SPINK8P0C7L1 97 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 RPL35AP18077 110 aaKnown RBP7.44□□□□□ -1.22
PABPC1-224ENST00000610907 PSMB2P49721 201 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 MIAQ16674 131 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 CDKN2A-AS1Q9UH64 79 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 AKAP9Q99996 3911 aa7.44□□□□□ -1.22
PABPC1-224ENST00000610907 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 INSL3P51460 131 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 GAGE4Q13068 117 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 GAGE5Q13069 117 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 CIRBPQ14011 172 aaKnown RBP7.43□□□□□ -1.22
PABPC1-224ENST00000610907 ETDBQ3ZM63 59 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 TMEM101Q96IK0 257 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 TMEM243Q9BU79 118 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 CDC42SE2Q9NRR3 84 aa7.43□□□□□ -1.22
PABPC1-224ENST00000610907 GAGE7O76087 117 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 SCGB1C2P0DMR2 95 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 TRGV4A0A0C4DH28 118 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 M0QXV9 152 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 UBE2L6O14933 153 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 TCL1BO95988 128 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 PF4P02776 101 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 PRSS2P07478 247 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 KIR2DL5BQ8NHK3 375 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 WFDC10AQ9H1F0 79 aa7.42□□□□□ -1.22
PABPC1-224ENST00000610907 MAST4O15021 2626 aa7.41□□□□□ -1.22
PABPC1-224ENST00000610907 TRBV30A0A0K0K1B3 111 aa7.41□□□□□ -1.22
PABPC1-224ENST00000610907 SMIM9A6NGZ8 99 aa7.41□□□□□ -1.22
PABPC1-224ENST00000610907 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
PABPC1-224ENST00000610907 COX6A2Q02221 97 aa7.41□□□□□ -1.22
PABPC1-224ENST00000610907 ADAMTSL4-AS1Q5T5F5 129 aa7.41□□□□□ -1.22
PABPC1-224ENST00000610907 SH2D6Q7Z4S9 175 aa7.41□□□□□ -1.22
PABPC1-224ENST00000610907 ITPR2Q14571 2701 aa7.4□□□□□ -1.22
PABPC1-224ENST00000610907 LY6G6DO95868 133 aa7.4□□□□□ -1.22
PABPC1-224ENST00000610907 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-224ENST00000610907 FHL2Q14192 279 aa7.4□□□□□ -1.22
PABPC1-224ENST00000610907 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-224ENST00000610907 PPDPFQ9H3Y8 114 aa7.4□□□□□ -1.22
PABPC1-224ENST00000610907 ACANP16112 2415 aa7.4□□□□□ -1.23
PABPC1-224ENST00000610907 NF1P21359 2839 aa7.39□□□□□ -1.23
PABPC1-224ENST00000610907 SMIM1B2RUZ4 78 aa7.39□□□□□ -1.23
PABPC1-224ENST00000610907 KRTAP10-3P60369 221 aa7.39□□□□□ -1.23
PABPC1-224ENST00000610907 HERV-K104P63124 156 aa7.39□□□□□ -1.23
PABPC1-224ENST00000610907 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
PABPC1-224ENST00000610907 LINC00612Q8N6U2 182 aa7.39□□□□□ -1.23
PABPC1-224ENST00000610907 ANK3Q12955 4377 aaKnown RBP7.39□□□□□ -1.23
PABPC1-224ENST00000610907 TRAV13-1A0A0B4J241 112 aa7.38□□□□□ -1.23
PABPC1-224ENST00000610907 A8MZ25 164 aa7.38□□□□□ -1.23
PABPC1-224ENST00000610907 FOXI1Q12951 378 aa7.38□□□□□ -1.23
PABPC1-224ENST00000610907 ATXN8Q156A1 80 aa7.38□□□□□ -1.23
PABPC1-224ENST00000610907 TEN1Q86WV5 123 aa7.38□□□□□ -1.23
PABPC1-224ENST00000610907 LINC01600Q96MT4 127 aa7.38□□□□□ -1.23
PABPC1-224ENST00000610907 HIVEP2P31629 2446 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms