RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 GAGE2EQ4V326 116 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 ZFP2Q6ZN57 461 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 ARL17AQ8IVW1 177 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 NPBQ8NG41 125 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 BAALCQ8WXS3 180 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 PTH2Q96A98 100 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 PLEKHB2Q96CS7 222 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 OVOL2Q9BRP0 275 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 GAGE2DQ9UEU5 116 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 UFC1Q9Y3C8 167 aa4.23□□□□□ -1.73
LINC00649-213ENST00000608431 NBR2O15453 112 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 SLC25A20O43772 301 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 SNCGO76070 127 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 PPP1R17O96001 155 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 CFC1P0CG37 223 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 SCGB1C2P0DMR2 95 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 IFITM1P13164 125 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 RPL13AP40429 203 aaKnown RBP4.22□□□□□ -1.73
LINC00649-213ENST00000608431 EBI3Q14213 229 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 KLK9Q2XQG4 91 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 SCGB1D4Q6XE38 83 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 RASL10AQ92737 203 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 C21orf62Q9NYP8 219 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 C11orf21Q9P2W6 132 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 KLK9Q9UKQ9 250 aa4.22□□□□□ -1.73
LINC00649-213ENST00000608431 FAT1Q14517 4588 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 A0A0B4J2C4 111 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 C11orf86A6NJI1 115 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 PRB4P10163 310 aaPredicted RBP4.21□□□□□ -1.74
LINC00649-213ENST00000608431 SUMO2P61956 95 aaKnown RBP4.21□□□□□ -1.74
LINC00649-213ENST00000608431 HES1Q14469 280 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 POM121L12Q8N7R1 296 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 SLC25A29Q8N8R3 303 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 TMEM141Q96I45 108 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 KIR2DL4Q99706 377 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 DPH3P1Q9H4G8 78 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 MDFICQ9P1T7 246 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 PRO1854Q9UHT4 67 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 TP53TG1Q9Y2A0 90 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 LENEPQ9Y5L5 61 aa4.21□□□□□ -1.74
LINC00649-213ENST00000608431 IGLV4-69A0A075B6H9 119 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 TRAV8-2A0A0B4J237 113 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 TRAV8-4A0A0B4J246 113 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 TRAV26-2A0A0B4J265 109 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 LINC01548A6NM66 108 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 PRAC2D3DTV9 90 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 CCDC179H3BU77 68 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 IGHV3-33P01772 117 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 CFHR3Q02985 330 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 TTC32Q5I0X7 151 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 SPANXN1Q5VSR9 72 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 C2orf66Q6UXQ4 117 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 C9orf47Q6ZRZ4 202 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 Q8N6K4 173 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 OR10J6PQ8NGY7 276 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 SPANXDQ9BXN6 97 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 AGPAT4-IT1Q9H0P7 198 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 ZNF580Q9UK33 172 aa4.2□□□□□ -1.74
LINC00649-213ENST00000608431 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.19□□□□□ -1.74
LINC00649-213ENST00000608431 TRAV4A0A0B4J268 109 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 A0A0J9YX75 114 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 C9JAW5 83 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 H3BVH4 76 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 M0R2N4 97 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 CLEC3BP05452 202 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 CRYGDP07320 174 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 CTSGP08311 255 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 HERV-K104P63124 156 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 PMVKQ15126 192 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 ATXN8Q156A1 80 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 LINC01620Q4KN68 170 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 IGFL4Q6B9Z1 124 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 TMEM263Q8WUH6 116 aaKnown RBP4.19□□□□□ -1.74
LINC00649-213ENST00000608431 ODF3Q96PU9 254 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 AMELXQ99217 191 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 TIMM17AQ99595 171 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 APLNQ9ULZ1 77 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 TNFRSF18Q9Y5U5 241 aa4.19□□□□□ -1.74
LINC00649-213ENST00000608431 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 IGIPA6NJ69 53 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
LINC00649-213ENST00000608431 H3BT86 120 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 LGALS9O00182 355 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 LEPROTO15243 131 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 BUB3O43684 328 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 NXPH4O95158 308 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 C15orf53Q8NAA6 179 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 NTN5Q8WTR8 489 aaPredicted RBP4.18□□□□□ -1.74
LINC00649-213ENST00000608431 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
LINC00649-213ENST00000608431 KLK15Q9H2R5 256 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms