RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 TRAV23DV6A0A075B6W5 121 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 BAALC-AS2P0C853 105 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 BSPH1Q075Z2 132 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 GPHB5Q86YW7 130 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 DEFB126Q9BYW3 111 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 PLCE1Q9P212 2302 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 MED13LQ71F56 2210 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 CFAP46Q8IYW2 2715 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 LRRK2Q5S007 2527 aa3.43□□□□□ -1.86
LINC01109-201ENST00000603837 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 Q8N2B8 174 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 CNFNQ9BYD5 112 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 BPESC1Q9GZL8 116 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 BSNQ9UPA5 3926 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 LEPROTO15243 131 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 TMEM14CQ9P0S9 112 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 LINC00588Q9Y4M8 146 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 MUC4Q99102 2169 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 ASH1LQ9NR48 2969 aaKnown RBP3.42□□□□□ -1.86
LINC01109-201ENST00000603837 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 NXPH4O95158 308 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 TRGV3P03979 118 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 NKAPP1Q8N9T2 125 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 IMMP1LQ96LU5 166 aa3.42□□□□□ -1.86
LINC01109-201ENST00000603837 MRPL36Q9P0J6 103 aaKnown RBP3.42□□□□□ -1.86
LINC01109-201ENST00000603837 LRBAP50851 2863 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 TACC2O95359 2948 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 TRAV7A0A075B6U4 112 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 SDHAF1A6NFY7 115 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 FUSP35637 526 aaKnown RBP eCLIP3.41□□□□□ -1.86
LINC01109-201ENST00000603837 RPL28P46779 137 aaKnown RBP3.41□□□□□ -1.86
LINC01109-201ENST00000603837 LYZP61626 148 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 PRR3P79522 188 aaKnown RBP3.41□□□□□ -1.86
LINC01109-201ENST00000603837 KLKP1Q107X0 134 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 KIAA0087Q14695 138 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 LINC00846Q9NV44 126 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 A0A0J9YXY3 114 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 NDUFB3O43676 98 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
LINC01109-201ENST00000603837 RMI2Q96E14 147 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 SNURFQ9Y675 71 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 PRRC2AP48634 2157 aaKnown RBP3.41□□□□□ -1.86
LINC01109-201ENST00000603837 TNCP24821 2201 aa3.41□□□□□ -1.86
LINC01109-201ENST00000603837 IGHV1-45A0A0A0MS14 117 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 IGLV9-49A0A0B4J1Y8 123 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 TRAV13-2A0A0B4J235 113 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 IGHV3-64DA0A0J9YX35 117 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 A0A0J9YX75 114 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 CCL3P10147 92 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 LMO4P61968 165 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 Q0VFX4 171 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 FAM229BQ4G0N7 80 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 SPINK14Q6IE38 97 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 HIVEP3Q5T1R4 2406 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 IGSF10Q6WRI0 2623 aa3.4□□□□□ -1.86
LINC01109-201ENST00000603837 IGHV3-64A0A075B6Q5 118 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 NDUFC1O43677 76 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 KRTAP10-2P60368 255 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 SND1-IT1Q9HBX3 110 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 SPRR3Q9UBC9 169 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 CHD6Q8TD26 2715 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 UTP20O75691 2785 aaKnown RBP3.4□□□□□ -1.87
LINC01109-201ENST00000603837 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 IGIPA6NJ69 53 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 ZNF876PQ49A33 203 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 LINC01554Q52M75 96 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 CRYBG3Q68DQ2 2970 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 ZNF580Q9UK33 172 aa3.4□□□□□ -1.87
LINC01109-201ENST00000603837 NOTCH2Q04721 2471 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 FASNP49327 2511 aaKnown RBP3.39□□□□□ -1.87
LINC01109-201ENST00000603837 IGKV2-40A0A087WW87 121 aaPredicted RBP3.39□□□□□ -1.87
LINC01109-201ENST00000603837 IBA57-AS1B1ANH7 110 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 IGKV2D-40P01614 121 aaPredicted RBP3.39□□□□□ -1.87
LINC01109-201ENST00000603837 SAA1P0DJI8 122 aaPredicted RBP3.39□□□□□ -1.87
LINC01109-201ENST00000603837 BLCAPP62952 87 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 NDUFA4L2Q9NRX3 87 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 C22orf24Q9Y442 160 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 USP24Q9UPU5 2620 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 ANKHD1Q8IWZ3 2542 aaKnown RBP3.39□□□□□ -1.87
LINC01109-201ENST00000603837 LHBP01229 141 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 SAA2P0DJI9 122 aaPredicted RBP3.39□□□□□ -1.87
LINC01109-201ENST00000603837 NANOS2P60321 138 aaKnown RBP3.39□□□□□ -1.87
LINC01109-201ENST00000603837 NDPQ00604 133 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 MIAQ16674 131 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 ATP5EP2Q5VTU8 51 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 ADM2Q7Z4H4 148 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 Q8TAT8 98 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 C14orf132Q9NPU4 83 aa3.39□□□□□ -1.87
LINC01109-201ENST00000603837 PINLYPA6NC86 204 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 BCE1O60756 84 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 POLQO75417 2590 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 TSHBP01222 138 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 UBE2BP63146 152 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 ESRGQ1W209 222 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 ZNF826PQ6ZT77 177 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 WFDC9Q8NEX5 89 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 TMEM141Q96I45 108 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms