RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 PSMG3-AS1Q96PY0 264 aa11.41□□□□□ -0.58
PPFIA3-206ENST00000602655 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
PPFIA3-206ENST00000602655 A6NDX4 124 aa11.41□□□□□ -0.58
PPFIA3-206ENST00000602655 GNRH2O43555 120 aa11.41□□□□□ -0.58
PPFIA3-206ENST00000602655 PEMTQ9UBM1 199 aa11.41□□□□□ -0.58
PPFIA3-206ENST00000602655 TMEM223A0PJW6 202 aa11.4□□□□□ -0.58
PPFIA3-206ENST00000602655 LEPROTO15243 131 aa11.4□□□□□ -0.58
PPFIA3-206ENST00000602655 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
PPFIA3-206ENST00000602655 A0A0J9YXY3 114 aa11.4□□□□□ -0.58
PPFIA3-206ENST00000602655 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
PPFIA3-206ENST00000602655 OVOL1O14753 267 aa11.4□□□□□ -0.58
PPFIA3-206ENST00000602655 JPT2Q9H910 190 aa11.4□□□□□ -0.58
PPFIA3-206ENST00000602655 ACYP1P07311 99 aa11.4□□□□□ -0.59
PPFIA3-206ENST00000602655 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.59
PPFIA3-206ENST00000602655 SMCR5Q8TEV8 140 aa11.4□□□□□ -0.59
PPFIA3-206ENST00000602655 CITED2Q99967 270 aaPredicted RBP11.4□□□□□ -0.59
PPFIA3-206ENST00000602655 ATOX1O00244 68 aa11.39□□□□□ -0.59
PPFIA3-206ENST00000602655 RNASE13Q5GAN3 156 aaKnown RBP11.39□□□□□ -0.59
PPFIA3-206ENST00000602655 VCYO14598 125 aa11.39□□□□□ -0.59
PPFIA3-206ENST00000602655 DPH3Q96FX2 82 aa11.39□□□□□ -0.59
PPFIA3-206ENST00000602655 PPP1R17O96001 155 aa11.38□□□□□ -0.59
PPFIA3-206ENST00000602655 TIMM21Q9BVV7 248 aa11.38□□□□□ -0.59
PPFIA3-206ENST00000602655 LST1O00453 97 aa11.38□□□□□ -0.59
PPFIA3-206ENST00000602655 TMEM141Q96I45 108 aa11.38□□□□□ -0.59
PPFIA3-206ENST00000602655 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 LINC00477Q96M19 166 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 WIPF1O43516 503 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 DAZ2Q13117 558 aaKnown RBP11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 DAZ4Q86SG3 579 aaKnown RBP11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 CYSTM1Q9H1C7 97 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 DAZ1Q9NQZ3 744 aaKnown RBP11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 DAZ3Q9NR90 486 aaKnown RBP11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 NDUFA12Q9UI09 145 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 A8MZ25 164 aa11.37□□□□□ -0.59
PPFIA3-206ENST00000602655 IGHG2P01859 326 aa11.36□□□□□ -0.59
PPFIA3-206ENST00000602655 BAALC-AS2P0C853 105 aa11.36□□□□□ -0.59
PPFIA3-206ENST00000602655 HIST1H4AP62805 103 aaKnown RBP11.36□□□□□ -0.59
PPFIA3-206ENST00000602655 RHPN1-AS1Q9BWJ2 59 aa11.36□□□□□ -0.59
PPFIA3-206ENST00000602655 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
PPFIA3-206ENST00000602655 AMELXQ99217 191 aa11.36□□□□□ -0.59
PPFIA3-206ENST00000602655 PRR9Q5T870 116 aa11.35□□□□□ -0.59
PPFIA3-206ENST00000602655 CR1P17927 2039 aa11.35□□□□□ -0.59
PPFIA3-206ENST00000602655 IGHV3-30-3P0DP02 117 aa11.35□□□□□ -0.59
PPFIA3-206ENST00000602655 RPS28P62857 69 aaKnown RBP11.35□□□□□ -0.59
PPFIA3-206ENST00000602655 ADAMTSL4-AS1Q5T5F5 129 aa11.35□□□□□ -0.59
PPFIA3-206ENST00000602655 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
PPFIA3-206ENST00000602655 A0A096LNT2 108 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 TRAV21A0A0B4J279 112 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 NXPH4O95158 308 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 SLURP1P55000 103 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 VWFP04275 2813 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 A0A087WVE0 104 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 BUB3O43684 328 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 ATP5G1P05496 136 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 TENM1Q9UKZ4 2725 aa11.34□□□□□ -0.59
PPFIA3-206ENST00000602655 DNAL4O96015 105 aa11.33□□□□□ -0.6
PPFIA3-206ENST00000602655 CRYGAP11844 174 aa11.33□□□□□ -0.6
PPFIA3-206ENST00000602655 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
PPFIA3-206ENST00000602655 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
PPFIA3-206ENST00000602655 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
PPFIA3-206ENST00000602655 TMEM258P61165 79 aa11.32□□□□□ -0.6
PPFIA3-206ENST00000602655 TIMM17AQ99595 171 aa11.32□□□□□ -0.6
PPFIA3-206ENST00000602655 KRTAP1-3Q8IUG1 177 aa11.32□□□□□ -0.6
PPFIA3-206ENST00000602655 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 A0A087WW49 117 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 CLPSL1A2RUU4 121 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 SUMO4Q6EEV6 95 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 GPHB5Q86YW7 130 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 CD28P10747 220 aa11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 CIRBPQ14011 172 aaKnown RBP11.31□□□□□ -0.6
PPFIA3-206ENST00000602655 TIRAPP58753 221 aa11.3□□□□□ -0.6
PPFIA3-206ENST00000602655 SPANXDQ9BXN6 97 aa11.3□□□□□ -0.6
PPFIA3-206ENST00000602655 Q9HAA7 133 aa11.3□□□□□ -0.6
PPFIA3-206ENST00000602655 IGHV4-4A0A075B6R2 117 aa11.3□□□□□ -0.6
PPFIA3-206ENST00000602655 PYGO1Q9Y3Y4 419 aa11.3□□□□□ -0.6
PPFIA3-206ENST00000602655 ESM1Q9NQ30 184 aa11.29□□□□□ -0.6
PPFIA3-206ENST00000602655 TRAV12-2A0A075B6T6 113 aa11.29□□□□□ -0.6
PPFIA3-206ENST00000602655 INAFM1C9JVW0 142 aa11.29□□□□□ -0.6
PPFIA3-206ENST00000602655 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
PPFIA3-206ENST00000602655 Q6YL49 198 aa11.29□□□□□ -0.6
PPFIA3-206ENST00000602655 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
PPFIA3-206ENST00000602655 DNAJC9-AS1A6NH13 148 aa11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 PRM2P04554 102 aa11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 TMEM61Q8N0U2 210 aa11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 J3QLI3 93 aa11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 OXTP01178 125 aa11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 SERP2Q8N6R1 65 aa11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 MRAPQ8TCY5 172 aa11.28□□□□□ -0.6
PPFIA3-206ENST00000602655 IGHV3OR16-12A0A075B7B8 117 aa11.27□□□□□ -0.61
PPFIA3-206ENST00000602655 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
PPFIA3-206ENST00000602655 A0A0U1RQV1 116 aa11.27□□□□□ -0.61
PPFIA3-206ENST00000602655 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
PPFIA3-206ENST00000602655 FAM223BA6NKX1 122 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms