RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PFDN1O60925 122 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 NDUFS6O75380 124 aaKnown RBP2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 C1QBP02746 253 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 TAGLN2P37802 199 aaKnown RBP2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 RPS10P46783 165 aaKnown RBP2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 RAB4BP61018 213 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 UBE2D3P61077 147 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 UBE2D2P62837 147 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 CCL20P78556 96 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 OR10J3Q5JRS4 329 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 SLC51BQ86UW2 128 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 BAGE2Q86Y30 109 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 MTURNQ8N3F0 131 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 PGLYRP4Q96LB8 373 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 SAMD10Q9BYL1 202 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 HERC1Q15751 4861 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 TRAV8-3A0A0A6YYJ7 113 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 F2Z2F3 143 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 M0R381 172 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 IGLV2-8P01709 118 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 IGLC6P0CF74 106 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 RPL35P42766 123 aaKnown RBP2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 RPS20P60866 119 aaKnown RBP2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 RPL19P84098 196 aaKnown RBP2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 MEF2BQ02080 365 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 TMEM97Q5BJF2 176 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 NIT1Q86X76 327 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 OR10AG1Q8NH19 301 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 LYPD6BQ8NI32 183 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 TMEM70Q9BUB7 260 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 BIN3Q9NQY0 253 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 GNG13Q9P2W3 67 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 VAX2Q9UIW0 290 aa2.2□□□□□ -2.06
CKS1BP3-201ENST00000600888 HSPG2P98160 4391 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 TRBV20OR9-2A0A075B6H5 130 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 TMSB15BA0A087X1C1 80 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 TRBV6-8A0A0A6YYG3 113 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 A0A1B0GV50 99 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 TMEM250H0YL14 139 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 PSCAO43653 123 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 IFNA1P01562 189 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 IGHV3-30P01768 117 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 IGHV3-33P01772 117 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 IGHV3-30-3P0DP02 117 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 IGHV3-30-5P0DP03 117 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 BCL2P10415 239 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 GNG4P50150 75 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 HNRNPA3P51991 378 aaKnown RBP2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 KRTAP10-1P60331 282 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 PKIAP61925 76 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 CACNG7P62955 275 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 Q0VG73 95 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 ELOBQ15370 118 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 CENPWQ5EE01 88 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 FAM74A4Q5TZK3 123 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 SPANXN1Q5VSR9 72 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 DAZ4Q86SG3 579 aaKnown RBP2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 C9orf62Q8N4C0 152 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 Q8N814 137 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 FRZBQ92765 325 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 RMI2Q96E14 147 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 DNAJC30Q96LL9 226 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 AP1S3Q96PC3 154 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 DERL1Q9BUN8 251 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 CNFNQ9BYD5 112 aa2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 CHTOPQ9Y3Y2 248 aaKnown RBP2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 DMBT1Q9UGM3 2413 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 SRRM2Q9UQ35 2752 aaKnown RBP2.19□□□□□ -2.06
CKS1BP3-201ENST00000600888 A0A087WX48 190 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 RAB19A4D1S5 217 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 RBFOX3A6NFN3 312 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 H7C1H1 209 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 M0QY20 66 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 P01737 135 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 TRGC1P0CF51 173 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 FOXA3P55318 350 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 ZNF56Q15929 161 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 IQCJQ1A5X6 159 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 Q6ZSA8 131 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 NTM-AS1Q6ZSK4 140 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 FAM231DQ6ZW35 169 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 AKAP14Q86UN6 197 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 Q8N976 141 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 FER1L6-AS1Q8NA97 138 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 OR2D3Q8NGH3 330 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 CHCHD10Q8WYQ3 142 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 FAM210AQ96ND0 272 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 MED9Q9NWA0 146 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 URGCP-MRPS24S4R325 110 aa2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP3-201ENST00000600888 TRBV25-1A0A075B6N4 114 aa2.17□□□□□ -2.06
CKS1BP3-201ENST00000600888 SMIM17P0DL12 118 aa2.17□□□□□ -2.06
CKS1BP3-201ENST00000600888 GZMBP10144 247 aa2.17□□□□□ -2.06
CKS1BP3-201ENST00000600888 NTF3P20783 257 aa2.17□□□□□ -2.06
CKS1BP3-201ENST00000600888 WFDC2Q14508 124 aa2.17□□□□□ -2.06
CKS1BP3-201ENST00000600888 MIAQ16674 131 aa2.17□□□□□ -2.06
CKS1BP3-201ENST00000600888 KRTAP26-1Q6PEX3 210 aa2.17□□□□□ -2.06
CKS1BP3-201ENST00000600888 KCNIP4Q6PIL6 250 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms