RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 GAGE7O76087 117 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE4Q13068 117 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE5Q13069 117 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 TAL2Q16559 108 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 NFE4Q86UQ8 179 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 Q8N2B8 174 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 NTN5Q8WTR8 489 aaPredicted RBP8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 PF4P02776 101 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 ANKRD29Q8N6D5 301 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 TIMM17AQ99595 171 aa8.38□□□□□ -1.07
ARHGEF1-220ENST00000600274 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
ARHGEF1-220ENST00000600274 RS1O15537 224 aa8.37□□□□□ -1.07
ARHGEF1-220ENST00000600274 SNCGO76070 127 aa8.37□□□□□ -1.07
ARHGEF1-220ENST00000600274 ZFAND6Q6FIF0 208 aa8.37□□□□□ -1.07
ARHGEF1-220ENST00000600274 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
ARHGEF1-220ENST00000600274 PRO1854Q9UHT4 67 aa8.37□□□□□ -1.07
ARHGEF1-220ENST00000600274 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 PPDPFLQ8WWR9 84 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 TRAV13-1A0A0B4J241 112 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 SLC25A20O43772 301 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 Q6ZUT4 128 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 DAND5Q8N907 189 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 NDUFA7O95182 113 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 RHOHQ15669 191 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 NDUFA11Q86Y39 141 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 C1orf158Q8N1D5 194 aa8.36□□□□□ -1.07
ARHGEF1-220ENST00000600274 POM121L12Q8N7R1 296 aa8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 DEFB130BP0DP73 79 aa8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 DEFB130AP0DP74 79 aa8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE2EQ4V326 116 aa8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE2DQ9UEU5 116 aa8.35□□□□□ -1.07
ARHGEF1-220ENST00000600274 A0A0J9YY99 117 aa8.34□□□□□ -1.07
ARHGEF1-220ENST00000600274 CFC1BP0CG36 223 aa8.34□□□□□ -1.07
ARHGEF1-220ENST00000600274 CFC1P0CG37 223 aa8.34□□□□□ -1.07
ARHGEF1-220ENST00000600274 GAGE6Q13070 117 aa8.34□□□□□ -1.07
ARHGEF1-220ENST00000600274 TIMM21Q9BVV7 248 aa8.34□□□□□ -1.07
ARHGEF1-220ENST00000600274 RHODO00212 210 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 TEN1Q86WV5 123 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 TMEM86BQ8N661 226 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 C11orf72Q8NBR9 251 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 F8P00451 2351 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 LOC100131303A0A0U1RQF7 123 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 KRTAP1-1Q07627 177 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 HIVEP1P15822 2718 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
ARHGEF1-220ENST00000600274 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
ARHGEF1-220ENST00000600274 NSD1Q96L73 2696 aaPredicted RBP8.32□□□□□ -1.08
ARHGEF1-220ENST00000600274 A0A096LPF7 62 aa8.32□□□□□ -1.08
ARHGEF1-220ENST00000600274 TRGV4A0A0C4DH28 118 aa8.32□□□□□ -1.08
ARHGEF1-220ENST00000600274 SPATA25Q9BR10 227 aa8.32□□□□□ -1.08
ARHGEF1-220ENST00000600274 DEFB4AO15263 64 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 C2orf82Q6UX34 121 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 INAFM1C9JVW0 142 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 IGHV3-30-3P0DP02 117 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 LINC00694P0DN24 101 aa8.31□□□□□ -1.08
ARHGEF1-220ENST00000600274 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
ARHGEF1-220ENST00000600274 FHL3Q13643 280 aa8.3□□□□□ -1.08
ARHGEF1-220ENST00000600274 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
ARHGEF1-220ENST00000600274 RNASE1P07998 156 aaKnown RBP8.3□□□□□ -1.08
ARHGEF1-220ENST00000600274 CHCHD7Q9BUK0 85 aa8.3□□□□□ -1.08
ARHGEF1-220ENST00000600274 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
ARHGEF1-220ENST00000600274 TRAV8-4A0A0B4J246 113 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 UBE2L6O14933 153 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 LY6G6DO95868 133 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 COX6CP09669 75 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 MEIG1Q5JSS6 88 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 LINC00482Q8N8I6 264 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 CDKN2A-AS1Q9UH64 79 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 UBE2D4Q9Y2X8 147 aa8.29□□□□□ -1.08
ARHGEF1-220ENST00000600274 LEPROTO15243 131 aa8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 TOMM7Q9P0U1 55 aa8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 CRLF1O75462 422 aa8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 ANK3Q12955 4377 aaKnown RBP8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 MAST4O15021 2626 aa8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 C15orf53Q8NAA6 179 aa8.28□□□□□ -1.08
ARHGEF1-220ENST00000600274 TRAV25A0A0B4J276 109 aa8.27□□□□□ -1.09
ARHGEF1-220ENST00000600274 K7EQD1 137 aa8.27□□□□□ -1.09
ARHGEF1-220ENST00000600274 UBE2D1P51668 147 aa8.27□□□□□ -1.09
ARHGEF1-220ENST00000600274 TMEM263Q8WUH6 116 aaKnown RBP8.27□□□□□ -1.09
ARHGEF1-220ENST00000600274 TMEM262E9PQX1 116 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms