RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
ZNF541-205ENST00000595558 CHCHD7Q9BUK0 85 aa11.12□□□□□ -0.63
ZNF541-205ENST00000595558 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
ZNF541-205ENST00000595558 TEX49A0A1B0GTD5 131 aa11.12□□□□□ -0.63
ZNF541-205ENST00000595558 NDUFA12Q9UI09 145 aa11.12□□□□□ -0.63
ZNF541-205ENST00000595558 LINC00467Q9BRT7 94 aa11.11□□□□□ -0.63
ZNF541-205ENST00000595558 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
ZNF541-205ENST00000595558 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
ZNF541-205ENST00000595558 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
ZNF541-205ENST00000595558 IGHV1-58A0A0C4DH39 117 aa11.1□□□□□ -0.63
ZNF541-205ENST00000595558 ESM1Q9NQ30 184 aa11.1□□□□□ -0.63
ZNF541-205ENST00000595558 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
ZNF541-205ENST00000595558 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
ZNF541-205ENST00000595558 H3BMM0 161 aa11.1□□□□□ -0.63
ZNF541-205ENST00000595558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.09□□□□□ -0.63
ZNF541-205ENST00000595558 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
ZNF541-205ENST00000595558 CRLF1O75462 422 aa11.08□□□□□ -0.64
ZNF541-205ENST00000595558 ATXN8Q156A1 80 aa11.08□□□□□ -0.64
ZNF541-205ENST00000595558 RNF152Q8N8N0 203 aa11.08□□□□□ -0.64
ZNF541-205ENST00000595558 RNF183Q96D59 192 aa11.08□□□□□ -0.64
ZNF541-205ENST00000595558 TRRAPQ9Y4A5 3859 aa11.08□□□□□ -0.64
ZNF541-205ENST00000595558 CLEC2BQ92478 149 aa11.08□□□□□ -0.64
ZNF541-205ENST00000595558 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
ZNF541-205ENST00000595558 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
ZNF541-205ENST00000595558 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
ZNF541-205ENST00000595558 EDA2RQ9HAV5 297 aa11.06□□□□□ -0.64
ZNF541-205ENST00000595558 ICOSQ9Y6W8 199 aa11.06□□□□□ -0.64
ZNF541-205ENST00000595558 TINCRA0A1B0GVN0 87 aa11.06□□□□□ -0.64
ZNF541-205ENST00000595558 SMR3AQ99954 134 aa11.06□□□□□ -0.64
ZNF541-205ENST00000595558 COX6A2Q02221 97 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 MIAQ16674 131 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 LINC01587Q99440 93 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 TRAV4A0A0B4J268 109 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 NDUFA7O95182 113 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 DNAJC9-AS1A6NH13 148 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 H7C423 109 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 CITED1Q99966 193 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 SPANXDQ9BXN6 97 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 SPANXCQ9NY87 97 aa11.05□□□□□ -0.64
ZNF541-205ENST00000595558 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
ZNF541-205ENST00000595558 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
ZNF541-205ENST00000595558 XCL2Q9UBD3 114 aa11.04□□□□□ -0.64
ZNF541-205ENST00000595558 KMT2BQ9UMN6 2715 aaPredicted RBP11.04□□□□□ -0.64
ZNF541-205ENST00000595558 TMEM262E9PQX1 116 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 M0QXV9 152 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 ZNF415Q09FC8 603 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 SPANXA1Q9NS26 97 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 ATRQ13535 2644 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 WFDC10AQ9H1F0 79 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 MAP6D1Q9H9H5 199 aa11.03□□□□□ -0.64
ZNF541-205ENST00000595558 C2orf82Q6UX34 121 aa11.02□□□□□ -0.65
ZNF541-205ENST00000595558 TMEM101Q96IK0 257 aa11.02□□□□□ -0.65
ZNF541-205ENST00000595558 A8MTW9 85 aa11.02□□□□□ -0.65
ZNF541-205ENST00000595558 LINC00694P0DN24 101 aa11.02□□□□□ -0.65
ZNF541-205ENST00000595558 TEX29Q8N6K0 151 aa11.02□□□□□ -0.65
ZNF541-205ENST00000595558 DYNLRB2Q8TF09 96 aa11.02□□□□□ -0.65
ZNF541-205ENST00000595558 IGHV3-53P01767 116 aa11.01□□□□□ -0.65
ZNF541-205ENST00000595558 RPL13AP40429 203 aaKnown RBP11.01□□□□□ -0.65
ZNF541-205ENST00000595558 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
ZNF541-205ENST00000595558 ANAPC13Q9BS18 74 aa11.01□□□□□ -0.65
ZNF541-205ENST00000595558 NHLRC4P0CG21 123 aaPredicted RBP11□□□□□ -0.65
ZNF541-205ENST00000595558 DEFB114Q30KQ6 69 aa11□□□□□ -0.65
ZNF541-205ENST00000595558 UBE2WQ96B02 151 aa11□□□□□ -0.65
ZNF541-205ENST00000595558 PLA2G2AP14555 144 aa10.99□□□□□ -0.65
ZNF541-205ENST00000595558 Q8N2B8 174 aa10.99□□□□□ -0.65
ZNF541-205ENST00000595558 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
ZNF541-205ENST00000595558 C4orf3Q8WVX3 66 aa10.99□□□□□ -0.65
ZNF541-205ENST00000595558 YAE1D1Q9NRH1 226 aa10.99□□□□□ -0.65
ZNF541-205ENST00000595558 FLNBO75369 2602 aaKnown RBP10.98□□□□□ -0.65
ZNF541-205ENST00000595558 SNCGO76070 127 aa10.98□□□□□ -0.65
ZNF541-205ENST00000595558 ODF3L2Q3SX64 289 aa10.98□□□□□ -0.65
ZNF541-205ENST00000595558 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
ZNF541-205ENST00000595558 Q9H8V8 135 aa10.98□□□□□ -0.65
ZNF541-205ENST00000595558 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 LST1O00453 97 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 RS1O15537 224 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 KRTAP1-1Q07627 177 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
ZNF541-205ENST00000595558 TTC32Q5I0X7 151 aa10.96□□□□□ -0.65
ZNF541-205ENST00000595558 LRRC75A-AS1Q8N1F1 130 aa10.96□□□□□ -0.65
ZNF541-205ENST00000595558 C15orf53Q8NAA6 179 aa10.96□□□□□ -0.65
ZNF541-205ENST00000595558 LINC01600Q96MT4 127 aa10.96□□□□□ -0.65
ZNF541-205ENST00000595558 HIVEP1P15822 2718 aa10.96□□□□□ -0.65
ZNF541-205ENST00000595558 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.66
ZNF541-205ENST00000595558 NDUFA1O15239 70 aa10.96□□□□□ -0.66
ZNF541-205ENST00000595558 COX6CP09669 75 aa10.96□□□□□ -0.66
ZNF541-205ENST00000595558 SOSTDC1Q6X4U4 206 aa10.96□□□□□ -0.66
ZNF541-205ENST00000595558 PEMTQ9UBM1 199 aa10.96□□□□□ -0.66
ZNF541-205ENST00000595558 IGLV5-45A0A087WSX0 123 aa10.95□□□□□ -0.66
ZNF541-205ENST00000595558 TRGV1A0A0A0MS02 117 aa10.95□□□□□ -0.66
ZNF541-205ENST00000595558 INSP01308 110 aa10.95□□□□□ -0.66
ZNF541-205ENST00000595558 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
ZNF541-205ENST00000595558 C1orf158Q8N1D5 194 aa10.95□□□□□ -0.66
ZNF541-205ENST00000595558 LINC00308Q8TCZ7 52 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms