RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 Q6Q795 121 aa11.92□□□□□ -0.5
LIG1-206ENST00000594067 C4orf3Q8WVX3 66 aa11.92□□□□□ -0.5
LIG1-206ENST00000594067 INSP01308 110 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 Q8N2B8 174 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 XCL2Q9UBD3 114 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 SS18L2Q9UHA2 77 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 B5MCH6 92 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 C15orf53Q8NAA6 179 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 CLEC2BQ92478 149 aa11.91□□□□□ -0.5
LIG1-206ENST00000594067 COX6CP09669 75 aa11.9□□□□□ -0.5
LIG1-206ENST00000594067 H3BT86 120 aa11.9□□□□□ -0.5
LIG1-206ENST00000594067 PTPN13Q12923 2485 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 TEX15Q9BXT5 2789 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 CR1P17927 2039 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 RS1O15537 224 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 IFITM1P13164 125 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 BEAN1Q3B7T3 259 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 TTC32Q5I0X7 151 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 DNAJC30Q96LL9 226 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 MYO9AB2RTY4 2548 aa11.89□□□□□ -0.51
LIG1-206ENST00000594067 LRRK2Q5S007 2527 aa11.88□□□□□ -0.51
LIG1-206ENST00000594067 LST1O00453 97 aa11.88□□□□□ -0.51
LIG1-206ENST00000594067 DAND5Q8N907 189 aa11.88□□□□□ -0.51
LIG1-206ENST00000594067 ZFYVE26Q68DK2 2539 aa11.88□□□□□ -0.51
LIG1-206ENST00000594067 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
LIG1-206ENST00000594067 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.87□□□□□ -0.51
LIG1-206ENST00000594067 C11orf44Q8N8P7 122 aa11.87□□□□□ -0.51
LIG1-206ENST00000594067 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
LIG1-206ENST00000594067 NAV2Q8IVL1 2488 aa11.87□□□□□ -0.51
LIG1-206ENST00000594067 ODF3L2Q3SX64 289 aa11.86□□□□□ -0.51
LIG1-206ENST00000594067 Q96MF0 132 aa11.86□□□□□ -0.51
LIG1-206ENST00000594067 ABCA12Q86UK0 2595 aa11.86□□□□□ -0.51
LIG1-206ENST00000594067 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 GAGE7O76087 117 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 GAGE12FP0CL80 117 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 GAGE12GP0CL81 117 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 GAGE12IP0CL82 117 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 COX6A2Q02221 97 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 GAGE4Q13068 117 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 DEFB113Q30KQ7 82 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 YAE1D1Q9NRH1 226 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 TRGV1A0A0A0MS02 117 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 TIMM17BO60830 172 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 DEFB121Q5J5C9 76 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 C1orf158Q8N1D5 194 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
LIG1-206ENST00000594067 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
LIG1-206ENST00000594067 A0A1W2PRX2 142 aa11.84□□□□□ -0.51
LIG1-206ENST00000594067 STHQ8IWL8 128 aa11.84□□□□□ -0.51
LIG1-206ENST00000594067 LINC00694P0DN24 101 aa11.83□□□□□ -0.51
LIG1-206ENST00000594067 CITED2Q99967 270 aaPredicted RBP11.83□□□□□ -0.51
LIG1-206ENST00000594067 NDUFA7O95182 113 aa11.83□□□□□ -0.52
LIG1-206ENST00000594067 TIRAPP58753 221 aa11.83□□□□□ -0.52
LIG1-206ENST00000594067 FAM240AA0A1B0GVK7 77 aa11.83□□□□□ -0.52
LIG1-206ENST00000594067 MRPL23Q16540 153 aaKnown RBP11.83□□□□□ -0.52
LIG1-206ENST00000594067 BBC3Q96PG8 261 aaPredicted RBP11.83□□□□□ -0.52
LIG1-206ENST00000594067 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
LIG1-206ENST00000594067 ZNF469Q96JG9 3925 aaPredicted RBP11.82□□□□□ -0.52
LIG1-206ENST00000594067 CUBNO60494 3623 aa11.82□□□□□ -0.52
LIG1-206ENST00000594067 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
LIG1-206ENST00000594067 A0A0U1RRA0 63 aa11.82□□□□□ -0.52
LIG1-206ENST00000594067 NDUFA1O15239 70 aa11.82□□□□□ -0.52
LIG1-206ENST00000594067 TLN2Q9Y4G6 2542 aa11.81□□□□□ -0.52
LIG1-206ENST00000594067 LINC00242Q5T6M2 205 aa11.81□□□□□ -0.52
LIG1-206ENST00000594067 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
LIG1-206ENST00000594067 Q6ZTI0 123 aa11.81□□□□□ -0.52
LIG1-206ENST00000594067 Q9H8V8 135 aa11.8□□□□□ -0.52
LIG1-206ENST00000594067 TRAV13-1A0A0B4J241 112 aa11.8□□□□□ -0.52
LIG1-206ENST00000594067 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
LIG1-206ENST00000594067 WNK1Q9H4A3 2382 aa11.79□□□□□ -0.52
LIG1-206ENST00000594067 EPG5Q9HCE0 2579 aa11.79□□□□□ -0.52
LIG1-206ENST00000594067 HERVK_113P63121 156 aa11.79□□□□□ -0.52
LIG1-206ENST00000594067 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
LIG1-206ENST00000594067 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
LIG1-206ENST00000594067 RPL36AP83881 106 aaKnown RBP11.78□□□□□ -0.52
LIG1-206ENST00000594067 RPL36ALQ969Q0 106 aaKnown RBP11.78□□□□□ -0.52
LIG1-206ENST00000594067 K7EQD1 137 aa11.78□□□□□ -0.52
LIG1-206ENST00000594067 SONP18583 2426 aaKnown RBP11.77□□□□□ -0.52
LIG1-206ENST00000594067 CIRBPQ14011 172 aaKnown RBP11.77□□□□□ -0.52
LIG1-206ENST00000594067 IGLV5-39A0A0G2JS06 123 aa11.77□□□□□ -0.53
LIG1-206ENST00000594067 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
LIG1-206ENST00000594067 CCL24O00175 119 aa11.76□□□□□ -0.53
LIG1-206ENST00000594067 KRTAP1-3Q8IUG1 177 aa11.76□□□□□ -0.53
LIG1-206ENST00000594067 DNAJC9-AS1A6NH13 148 aa11.76□□□□□ -0.53
LIG1-206ENST00000594067 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
LIG1-206ENST00000594067 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
LIG1-206ENST00000594067 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
LIG1-206ENST00000594067 TRBV7-7A0A0K0K1E9 115 aa11.75□□□□□ -0.53
LIG1-206ENST00000594067 SOSTDC1Q6X4U4 206 aa11.75□□□□□ -0.53
LIG1-206ENST00000594067 USP24Q9UPU5 2620 aa11.75□□□□□ -0.53
LIG1-206ENST00000594067 UBR5O95071 2799 aaPredicted RBP11.75□□□□□ -0.53
LIG1-206ENST00000594067 COX7A2LO14548 114 aa11.74□□□□□ -0.53
LIG1-206ENST00000594067 TRBV10-1A0A0K0K1A3 114 aa11.74□□□□□ -0.53
LIG1-206ENST00000594067 SHISA2Q6UWI4 295 aa11.74□□□□□ -0.53
LIG1-206ENST00000594067 NOTCH3Q9UM47 2321 aa11.74□□□□□ -0.53
LIG1-206ENST00000594067 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
LIG1-206ENST00000594067 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms