RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 BAGE3Q86Y29 109 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 TMEM18Q96B42 140 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 NXT2Q9NPJ8 142 aaKnown RBP6.49□□□□□ -1.37
DDX39A-220ENST00000593008 UBE2D4Q9Y2X8 147 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 A0A087WX48 190 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 IGKV3OR2-268A0A0C4DH90 116 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 UBE2L6O14933 153 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 C2orf66Q6UXQ4 117 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 LINC00173Q6ZV60 143 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 Q9HAA7 133 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 KLK12Q9UKR0 248 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 COX11Q9Y6N1 276 aa6.48□□□□□ -1.37
DDX39A-220ENST00000593008 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
DDX39A-220ENST00000593008 C1orf196B1AJZ1 125 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 H7C423 109 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 LINC00614P0C842 121 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 Q0VG73 95 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 LINC00269Q8N2A0 174 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 UBE2WQ96B02 151 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 PKD1P98161 4303 aa6.47□□□□□ -1.37
DDX39A-220ENST00000593008 ANGP03950 147 aaKnown RBP6.46□□□□□ -1.38
DDX39A-220ENST00000593008 NDUFA6P56556 154 aa6.46□□□□□ -1.38
DDX39A-220ENST00000593008 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.38
DDX39A-220ENST00000593008 PDZD11Q5EBL8 140 aa6.46□□□□□ -1.38
DDX39A-220ENST00000593008 AMMECR1LQ6DCA0 310 aa6.46□□□□□ -1.38
DDX39A-220ENST00000593008 ENHOQ6UWT2 76 aa6.46□□□□□ -1.38
DDX39A-220ENST00000593008 RMI2Q96E14 147 aa6.46□□□□□ -1.38
DDX39A-220ENST00000593008 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
DDX39A-220ENST00000593008 IGLV10-54A0A075B6I4 117 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 LINC01549A6NIU2 74 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 K7EMI3 77 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 MRPL52Q86TS9 123 aaKnown RBP6.45□□□□□ -1.38
DDX39A-220ENST00000593008 OR5A1Q8NGJ0 315 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 TOMM6Q96B49 74 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 TM2D2Q9BX73 214 aa6.45□□□□□ -1.38
DDX39A-220ENST00000593008 TMA7Q9Y2S6 64 aaKnown RBP6.45□□□□□ -1.38
DDX39A-220ENST00000593008 EREGO14944 169 aa6.44□□□□□ -1.38
DDX39A-220ENST00000593008 HBDP02042 147 aa6.44□□□□□ -1.38
DDX39A-220ENST00000593008 RAB5BP61020 215 aa6.44□□□□□ -1.38
DDX39A-220ENST00000593008 CHCHD1Q96BP2 118 aaKnown RBP6.44□□□□□ -1.38
DDX39A-220ENST00000593008 TMEM101Q96IK0 257 aa6.44□□□□□ -1.38
DDX39A-220ENST00000593008 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
DDX39A-220ENST00000593008 CDC42SE2Q9NRR3 84 aa6.44□□□□□ -1.38
DDX39A-220ENST00000593008 IBA57-AS1B1ANH7 110 aa6.43□□□□□ -1.38
DDX39A-220ENST00000593008 HSBP1O75506 76 aa6.43□□□□□ -1.38
DDX39A-220ENST00000593008 REG3AQ06141 175 aa6.43□□□□□ -1.38
DDX39A-220ENST00000593008 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
DDX39A-220ENST00000593008 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
DDX39A-220ENST00000593008 ZNF664Q8N3J9 261 aa6.43□□□□□ -1.38
DDX39A-220ENST00000593008 SCGB3A1Q96QR1 104 aa6.43□□□□□ -1.38
DDX39A-220ENST00000593008 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
DDX39A-220ENST00000593008 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 A0A1B0GUV1 79 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 FABP4P15090 132 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 ZNF25P17030 456 aaPredicted RBP6.42□□□□□ -1.38
DDX39A-220ENST00000593008 WFDC2Q14508 124 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 COA6Q5JTJ3 125 aaKnown RBP6.42□□□□□ -1.38
DDX39A-220ENST00000593008 SPATA12Q7Z6I5 190 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 MAPKAPK5-AS1Q8N8E1 139 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 BAALCQ8WXS3 180 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 PRR34Q9NV39 138 aa6.42□□□□□ -1.38
DDX39A-220ENST00000593008 IGKV2D-24A0A075B6R9 120 aa6.41□□□□□ -1.38
DDX39A-220ENST00000593008 IFITM10A6NMD0 228 aa6.41□□□□□ -1.38
DDX39A-220ENST00000593008 C16orf90A8MZG2 172 aa6.41□□□□□ -1.38
DDX39A-220ENST00000593008 LECT2O14960 151 aa6.41□□□□□ -1.38
DDX39A-220ENST00000593008 CRPP02741 224 aa6.41□□□□□ -1.38
DDX39A-220ENST00000593008 FUSP35637 526 aaKnown RBP eCLIP6.41□□□□□ -1.38
DDX39A-220ENST00000593008 KRTAP26-1Q6PEX3 210 aa6.41□□□□□ -1.38
DDX39A-220ENST00000593008 TIMM21Q9BVV7 248 aa6.41□□□□□ -1.38
DDX39A-220ENST00000593008 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 LRP1BQ9NZR2 4599 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 KIAA1109Q2LD37 5005 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 H0Y8G0 127 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 CCL25O15444 150 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 PSCAO43653 123 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 XCL1P47992 114 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 MRPS36P82909 103 aaKnown RBP6.4□□□□□ -1.38
DDX39A-220ENST00000593008 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 HIST3H2BBQ8N257 126 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 TMEM141Q96I45 108 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 TIMM17AQ99595 171 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 PYGO1Q9Y3Y4 419 aa6.4□□□□□ -1.38
DDX39A-220ENST00000593008 TRAV8-4A0A0B4J246 113 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 LINC00959A0A1B0GUT2 108 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 GAGE12HA6NDE8 117 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
DDX39A-220ENST00000593008 COX6A2Q02221 97 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 ERASQ7Z444 233 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 CHCHD10Q8WYQ3 142 aaPredicted RBP6.39□□□□□ -1.39
DDX39A-220ENST00000593008 AMELXQ99217 191 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 PMCHL2Q9BQD1 86 aa6.39□□□□□ -1.39
DDX39A-220ENST00000593008 CSDC2Q9Y534 153 aaKnown RBP6.39□□□□□ -1.39
DDX39A-220ENST00000593008 HERC2O95714 4834 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms