RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 APOC4P55056 127 aa10.7□□□□□ -0.7
RETREG3-208ENST00000589797 TRAV25A0A0B4J276 109 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 CRIP2P52943 208 aaPredicted RBP10.69□□□□□ -0.7
RETREG3-208ENST00000589797 HERVK_113P63121 156 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 S100A7L2Q5SY68 101 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 LEPROTO15243 131 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 NDUFA7O95182 113 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 PTH2Q96A98 100 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
RETREG3-208ENST00000589797 SPANXA1Q9NS26 97 aa10.69□□□□□ -0.7
RETREG3-208ENST00000589797 IGLV4-3A0A075B6K6 122 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 C9orf66Q5T8R8 295 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 UBE2WQ96B02 151 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 VSIG2Q96IQ7 327 aa10.68□□□□□ -0.7
RETREG3-208ENST00000589797 Q9UF83 564 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 FAM222AQ5U5X8 452 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 CFC1P0CG37 223 aa10.67□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 Q9HAA7 133 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 TRBV27A0A0K0K1C4 114 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 TAL2Q16559 108 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 RNF152Q8N8N0 203 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 SIGMAR1Q99720 223 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 CELSR2Q9HCU4 2923 aa10.66□□□□□ -0.7
RETREG3-208ENST00000589797 IGHV4-4A0A075B6R2 117 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 C9orf85Q96MD7 179 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 TSHBP01222 138 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 ZNF22P17026 224 aaPredicted RBP10.65□□□□□ -0.7
RETREG3-208ENST00000589797 ATXN8Q156A1 80 aa10.65□□□□□ -0.7
RETREG3-208ENST00000589797 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 DAZ2Q13117 558 aaKnown RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 TTC32Q5I0X7 151 aa10.65□□□□□ -0.71
RETREG3-208ENST00000589797 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.71
RETREG3-208ENST00000589797 ZNF580Q9UK33 172 aa10.65□□□□□ -0.71
RETREG3-208ENST00000589797 Q6ZSN1 163 aa10.64□□□□□ -0.71
RETREG3-208ENST00000589797 HIGD1BQ9P298 99 aa10.64□□□□□ -0.71
RETREG3-208ENST00000589797 HILS1P60008 231 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 DNAJC30Q96LL9 226 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 HRNRQ86YZ3 2850 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-208ENST00000589797 COX8CQ7Z4L0 72 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 TRAV26-1A0A087WT03 109 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 FBN2P35556 2912 aa10.63□□□□□ -0.71
RETREG3-208ENST00000589797 TSPAN13O95857 204 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
RETREG3-208ENST00000589797 OXLD1Q5BKU9 147 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-208ENST00000589797 KLK12Q9UKR0 248 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 SLC25A20O43772 301 aa10.62□□□□□ -0.71
RETREG3-208ENST00000589797 ATP5G1P05496 136 aa10.61□□□□□ -0.71
RETREG3-208ENST00000589797 SPART-AS1P0CW21 52 aa10.61□□□□□ -0.71
RETREG3-208ENST00000589797 C10orf126Q8N4M7 172 aa10.61□□□□□ -0.71
RETREG3-208ENST00000589797 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 C1orf158Q8N1D5 194 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 F8W1H4 67 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
RETREG3-208ENST00000589797 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.6□□□□□ -0.71
RETREG3-208ENST00000589797 TRAV8-4A0A0B4J246 113 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 CLEC2BQ92478 149 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 SCGB1A1P11684 91 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 PRO0255Q9UI72 69 aa10.59□□□□□ -0.71
RETREG3-208ENST00000589797 TRBV20-1A0A075B6N2 111 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 EDA2RQ9HAV5 297 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 RS1O15537 224 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 NDUFA11Q86Y39 141 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
RETREG3-208ENST00000589797 MIR7-3HGQ8N6C7 128 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 TRBV6-5A0A0K0K1A5 114 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 LINC00269Q8N2A0 174 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 IGKV2D-24A0A075B6R9 120 aa10.57□□□□□ -0.72
RETREG3-208ENST00000589797 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 CSMD1Q96PZ7 3565 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 PIK3CD-AS1Q5SR53 167 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 ZMAT4Q9H898 229 aa10.56□□□□□ -0.72
RETREG3-208ENST00000589797 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
RETREG3-208ENST00000589797 TM2D2Q9BX73 214 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 UBE2DNLQ8IWF7 75 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 CUBNO60494 3623 aa10.55□□□□□ -0.72
RETREG3-208ENST00000589797 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms