RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TCTAP57738 103 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 SCGB1D4Q6XE38 83 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 DEFB104AQ8WTQ1 72 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 TMEM101Q96IK0 257 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 OPRPNQ99935 248 aaPredicted RBP7.38□□□□□ -1.23
VPS25-203ENST00000589520 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 TP73-AS1Q9UF72 201 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.37□□□□□ -1.23
VPS25-203ENST00000589520 IGHV3-38A0A0C4DH36 116 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 TEX48A0A1B0GUV7 120 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 IGKV2-29A2NJV5 120 aaPredicted RBP7.37□□□□□ -1.23
VPS25-203ENST00000589520 J3QQQ9 107 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 UBE2L6O14933 153 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 PTTG1IPP53801 180 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 HERVK_113P63121 156 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 HIST1H4GQ99525 98 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 Q9UF83 564 aa7.37□□□□□ -1.23
VPS25-203ENST00000589520 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 TMEM238LA0A1B0GVL6 79 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 A6NJY4 79 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 LINC00694P0DN24 101 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 GCSHP23434 173 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 UBE2D1P51668 147 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 C3orf56Q8N813 242 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 GEMIN7Q9H840 131 aaKnown RBP7.36□□□□□ -1.23
VPS25-203ENST00000589520 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
VPS25-203ENST00000589520 PRO0255Q9UI72 69 aa7.36□□□□□ -1.23
VPS25-203ENST00000589520 IGLV5-45A0A087WSX0 123 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 EMP1P54849 157 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 KRTAP24-1Q3LI83 254 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 NTM-AS1Q6ZSK4 140 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 OR5A1Q8NGJ0 315 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 RNF183Q96D59 192 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 NACAE9PAV3 2078 aa7.35□□□□□ -1.23
VPS25-203ENST00000589520 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
VPS25-203ENST00000589520 DEFB130BP0DP73 79 aa7.34□□□□□ -1.23
VPS25-203ENST00000589520 DEFB130AP0DP74 79 aa7.34□□□□□ -1.23
VPS25-203ENST00000589520 EGFEM1PQ0D2K5 195 aa7.34□□□□□ -1.23
VPS25-203ENST00000589520 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS25-203ENST00000589520 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
VPS25-203ENST00000589520 CDC42SE2Q9NRR3 84 aa7.34□□□□□ -1.23
VPS25-203ENST00000589520 A0A0J9YY99 117 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 SPART-AS1P0CW21 52 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 IGHV4-30-4P0DP06 118 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 VAMP3Q15836 100 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 FAM222AQ5U5X8 452 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 CEMP1Q6PRD7 247 aaPredicted RBP7.33□□□□□ -1.24
VPS25-203ENST00000589520 Q6ZUT4 128 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 Q6ZVH6 145 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 SH2D6Q7Z4S9 175 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 ATP6V0E2Q8NHE4 81 aa7.33□□□□□ -1.24
VPS25-203ENST00000589520 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
VPS25-203ENST00000589520 FXYD2P54710 66 aa7.32□□□□□ -1.24
VPS25-203ENST00000589520 DAD1P61803 113 aa7.32□□□□□ -1.24
VPS25-203ENST00000589520 DEFB135Q30KP9 77 aa7.32□□□□□ -1.24
VPS25-203ENST00000589520 GTF2H5Q6ZYL4 71 aa7.32□□□□□ -1.24
VPS25-203ENST00000589520 VSIG2Q96IQ7 327 aa7.32□□□□□ -1.24
VPS25-203ENST00000589520 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 CCL25O15444 150 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 ATP5G1P05496 136 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 IGHV3-30-3P0DP02 117 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 Q8NAQ8 132 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
VPS25-203ENST00000589520 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
VPS25-203ENST00000589520 PAX4O43316 350 aa7.3□□□□□ -1.24
VPS25-203ENST00000589520 GYPEP15421 78 aa7.3□□□□□ -1.24
VPS25-203ENST00000589520 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
VPS25-203ENST00000589520 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
VPS25-203ENST00000589520 MGAM2Q2M2H8 2515 aa7.3□□□□□ -1.24
VPS25-203ENST00000589520 LOC100131303A0A0U1RQF7 123 aa7.29□□□□□ -1.24
VPS25-203ENST00000589520 GAGE10A6NGK3 116 aa7.29□□□□□ -1.24
VPS25-203ENST00000589520 TIMM17BO60830 172 aa7.29□□□□□ -1.24
VPS25-203ENST00000589520 FABP2P12104 132 aa7.29□□□□□ -1.24
VPS25-203ENST00000589520 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
VPS25-203ENST00000589520 RPL24P83731 157 aaKnown RBP7.29□□□□□ -1.24
VPS25-203ENST00000589520 ZFAND6Q6FIF0 208 aa7.29□□□□□ -1.24
VPS25-203ENST00000589520 CHCHD5Q9BSY4 110 aa7.29□□□□□ -1.24
VPS25-203ENST00000589520 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
VPS25-203ENST00000589520 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.28□□□□□ -1.24
VPS25-203ENST00000589520 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 A0A0J9YXY3 114 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 A0A1W2PPM0 123 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 H3BUT2 72 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 IGHV3-30P01768 117 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 IGHV3-30-5P0DP03 117 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 CIRBPQ14011 172 aaKnown RBP7.28□□□□□ -1.24
VPS25-203ENST00000589520 RNASE13Q5GAN3 156 aaKnown RBP7.28□□□□□ -1.24
VPS25-203ENST00000589520 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 COPS9Q8WXC6 57 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 CDKN2A-AS1Q9UH64 79 aa7.28□□□□□ -1.24
VPS25-203ENST00000589520 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms