RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PYGO1Q9Y3Y4 419 aa15.44■□□□□ 0.06
ACTN4-210ENST00000588618 CSDC2Q9Y534 153 aaKnown RBP15.44■□□□□ 0.06
ACTN4-210ENST00000588618 IGHV3-30P01768 117 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 IGHV3-33P01772 117 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 IGHV3-30-3P0DP02 117 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 IGHV3-30-5P0DP03 117 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 Q6ZN92 141 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 TMEM141Q96I45 108 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 PAPPA-AS1Q5QFB9 102 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 HIST1H2BLQ99880 126 aa15.43■□□□□ 0.06
ACTN4-210ENST00000588618 IGIPA6NJ69 53 aa15.42■□□□□ 0.06
ACTN4-210ENST00000588618 ANGP03950 147 aaKnown RBP15.42■□□□□ 0.06
ACTN4-210ENST00000588618 LINC01556Q5JQF7 62 aa15.42■□□□□ 0.06
ACTN4-210ENST00000588618 DNAH10OSP0CZ25 163 aa15.41■□□□□ 0.06
ACTN4-210ENST00000588618 LGALS9CQ6DKI2 356 aa15.41■□□□□ 0.06
ACTN4-210ENST00000588618 OPRPNQ99935 248 aaPredicted RBP15.41■□□□□ 0.06
ACTN4-210ENST00000588618 IGLV4-60A0A075B6I1 120 aa15.4■□□□□ 0.06
ACTN4-210ENST00000588618 NPSP0C0P6 89 aa15.4■□□□□ 0.06
ACTN4-210ENST00000588618 ZNF664Q8N3J9 261 aa15.4■□□□□ 0.06
ACTN4-210ENST00000588618 IFI27L1Q96BM0 104 aa15.4■□□□□ 0.06
ACTN4-210ENST00000588618 PACRGQ96M98 296 aaPredicted RBP15.4■□□□□ 0.06
ACTN4-210ENST00000588618 TRAV9-2A0A087WT02 112 aa15.39■□□□□ 0.05
ACTN4-210ENST00000588618 CDC42SE2Q9NRR3 84 aa15.39■□□□□ 0.05
ACTN4-210ENST00000588618 IGLV4-3A0A075B6K6 122 aa15.38■□□□□ 0.05
ACTN4-210ENST00000588618 LY6G6CO95867 125 aa15.38■□□□□ 0.05
ACTN4-210ENST00000588618 MRPS36P82909 103 aaKnown RBP15.38■□□□□ 0.05
ACTN4-210ENST00000588618 TEX43Q6ZNM6 134 aa15.38■□□□□ 0.05
ACTN4-210ENST00000588618 Q6ZUT4 128 aa15.38■□□□□ 0.05
ACTN4-210ENST00000588618 VCX2Q9H322 139 aa15.38■□□□□ 0.05
ACTN4-210ENST00000588618 ALMS1Q8TCU4 4167 aa15.37■□□□□ 0.05
ACTN4-210ENST00000588618 RNASE13Q5GAN3 156 aaKnown RBP15.37■□□□□ 0.05
ACTN4-210ENST00000588618 KLK12Q9UKR0 248 aa15.37■□□□□ 0.05
ACTN4-210ENST00000588618 PRSS1P07477 247 aa15.37■□□□□ 0.05
ACTN4-210ENST00000588618 C10orf126Q8N4M7 172 aa15.37■□□□□ 0.05
ACTN4-210ENST00000588618 C2orf88Q9BSF0 95 aa15.37■□□□□ 0.05
ACTN4-210ENST00000588618 MAP1LC3CQ9BXW4 147 aa15.37■□□□□ 0.05
ACTN4-210ENST00000588618 CRPP02741 224 aa15.36■□□□□ 0.05
ACTN4-210ENST00000588618 ZC2HC1BQ5TFG8 222 aa15.36■□□□□ 0.05
ACTN4-210ENST00000588618 LINC00269Q8N2A0 174 aa15.35■□□□□ 0.05
ACTN4-210ENST00000588618 IGKV3OR2-268A0A0C4DH90 116 aa15.34■□□□□ 0.05
ACTN4-210ENST00000588618 H0Y8G0 127 aa15.34■□□□□ 0.05
ACTN4-210ENST00000588618 K7EP13 123 aa15.34■□□□□ 0.05
ACTN4-210ENST00000588618 BAALCQ8WXS3 180 aa15.34■□□□□ 0.05
ACTN4-210ENST00000588618 LINC00476Q8WZB0 136 aa15.34■□□□□ 0.05
ACTN4-210ENST00000588618 KMT2AQ03164 3969 aa15.34■□□□□ 0.05
ACTN4-210ENST00000588618 CLPSL2Q6UWE3 100 aa15.34■□□□□ 0.05
ACTN4-210ENST00000588618 PMVKQ15126 192 aa15.33■□□□□ 0.04
ACTN4-210ENST00000588618 REG3AQ06141 175 aa15.32■□□□□ 0.04
ACTN4-210ENST00000588618 SACSQ9NZJ4 4579 aa15.32■□□□□ 0.04
ACTN4-210ENST00000588618 TTC32Q5I0X7 151 aa15.31■□□□□ 0.04
ACTN4-210ENST00000588618 UBE2WQ96B02 151 aa15.31■□□□□ 0.04
ACTN4-210ENST00000588618 KRTDAPP60985 99 aa15.31■□□□□ 0.04
ACTN4-210ENST00000588618 SPATA12Q7Z6I5 190 aa15.31■□□□□ 0.04
ACTN4-210ENST00000588618 AMELXQ99217 191 aa15.31■□□□□ 0.04
ACTN4-210ENST00000588618 TRAV13-1A0A0B4J241 112 aa15.3■□□□□ 0.04
ACTN4-210ENST00000588618 C3orf79P0CE67 100 aa15.3■□□□□ 0.04
ACTN4-210ENST00000588618 DNAH10Q8IVF4 4471 aa15.3■□□□□ 0.04
ACTN4-210ENST00000588618 CST9LQ9H4G1 147 aa15.29■□□□□ 0.04
ACTN4-210ENST00000588618 DNAH6Q9C0G6 4158 aa15.29■□□□□ 0.04
ACTN4-210ENST00000588618 OR10D4PQ8NGN7 298 aa15.29■□□□□ 0.04
ACTN4-210ENST00000588618 PRR34Q9NV39 138 aa15.29■□□□□ 0.04
ACTN4-210ENST00000588618 PRSS29PA6NIE9 313 aa15.28■□□□□ 0.04
ACTN4-210ENST00000588618 NBDYA0A0U1RRE5 68 aa15.27■□□□□ 0.04
ACTN4-210ENST00000588618 IBA57-AS1B1ANH7 110 aa15.27■□□□□ 0.04
ACTN4-210ENST00000588618 SYS1-DBNDD2H3BUS1 97 aa15.27■□□□□ 0.04
ACTN4-210ENST00000588618 SS18Q15532 418 aa15.27■□□□□ 0.04
ACTN4-210ENST00000588618 TRAV8-3A0A0A6YYJ7 113 aa15.26■□□□□ 0.03
ACTN4-210ENST00000588618 TRAV12-1A0A0B4J245 112 aa15.26■□□□□ 0.03
ACTN4-210ENST00000588618 MIAQ16674 131 aa15.26■□□□□ 0.03
ACTN4-210ENST00000588618 ENHOQ6UWT2 76 aa15.26■□□□□ 0.03
ACTN4-210ENST00000588618 HYDINQ4G0P3 5121 aa15.25■□□□□ 0.03
ACTN4-210ENST00000588618 DNAH2Q9P225 4427 aa15.25■□□□□ 0.03
ACTN4-210ENST00000588618 LINC00959A0A1B0GUT2 108 aa15.25■□□□□ 0.03
ACTN4-210ENST00000588618 Q9HAA7 133 aa15.25■□□□□ 0.03
ACTN4-210ENST00000588618 CHTOPQ9Y3Y2 248 aaKnown RBP15.25■□□□□ 0.03
ACTN4-210ENST00000588618 TRAV8-4A0A0B4J246 113 aa15.24■□□□□ 0.03
ACTN4-210ENST00000588618 LOC105371267A0A1B0GV96 52 aa15.24■□□□□ 0.03
ACTN4-210ENST00000588618 CCL25O15444 150 aa15.24■□□□□ 0.03
ACTN4-210ENST00000588618 PET117Q6UWS5 81 aa15.24■□□□□ 0.03
ACTN4-210ENST00000588618 IGLV10-54A0A075B6I4 117 aa15.23■□□□□ 0.03
ACTN4-210ENST00000588618 C20orf202A1L168 122 aa15.23■□□□□ 0.03
ACTN4-210ENST00000588618 UBE2D1P51668 147 aa15.23■□□□□ 0.03
ACTN4-210ENST00000588618 SEC11AP67812 179 aa15.23■□□□□ 0.03
ACTN4-210ENST00000588618 KRTAP1-5Q9BYS1 174 aa15.23■□□□□ 0.03
ACTN4-210ENST00000588618 M0R2N4 97 aa15.23■□□□□ 0.03
ACTN4-210ENST00000588618 C1orf43Q9BWL3 253 aa15.23■□□□□ 0.03
ACTN4-210ENST00000588618 ODF1Q14990 250 aa15.22■□□□□ 0.03
ACTN4-210ENST00000588618 RMI2Q96E14 147 aa15.22■□□□□ 0.03
ACTN4-210ENST00000588618 PMCHL2Q9BQD1 86 aa15.22■□□□□ 0.03
ACTN4-210ENST00000588618 F8VRH5 84 aa15.21■□□□□ 0.03
ACTN4-210ENST00000588618 GEMIN7Q9H840 131 aaKnown RBP15.21■□□□□ 0.03
ACTN4-210ENST00000588618 XCL1P47992 114 aa15.2■□□□□ 0.02
ACTN4-210ENST00000588618 MRPL35Q9NZE8 188 aaKnown RBP15.2■□□□□ 0.02
ACTN4-210ENST00000588618 IGKV2D-24A0A075B6R9 120 aa15.2■□□□□ 0.02
ACTN4-210ENST00000588618 A0A0J9YXV3 536 aa15.2■□□□□ 0.02
ACTN4-210ENST00000588618 CHCHD10Q8WYQ3 142 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-210ENST00000588618 IGLV4-69A0A075B6H9 119 aa15.19■□□□□ 0.02
ACTN4-210ENST00000588618 AKR1D1P51857 326 aa15.18■□□□□ 0.02
ACTN4-210ENST00000588618 HERVK_113P63121 156 aa15.18■□□□□ 0.02
ACTN4-210ENST00000588618 LINC00242Q5T6M2 205 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms