RNA–Protein interactions for RNA: ENST00000588439.1

TYROBP-208, Transcript of TYRO protein tyrosine kinase binding protein, human

TSL 2

Gene TYROBP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TYROBP-208	ENST00000588439	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439	C6orf223	Q8N319	242 aa		13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439	OR5A1	Q8NGJ0	315 aa		13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439	HIST1H2BH	Q93079	126 aa		13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439	TOMM6	Q96B49	74 aa		13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439	TMEM101	Q96IK0	257 aa		13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439	HIST1H2BN	Q99877	126 aa		13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439	HIST1H2BM	Q99879	126 aa		13.69	□□□□□ -0.22
TYROBP-208	ENST00000588439		A0A096LNJ9	63 aa		13.68	□□□□□ -0.22
TYROBP-208	ENST00000588439	LINC00269	Q8N2A0	174 aa		13.68	□□□□□ -0.22
TYROBP-208	ENST00000588439	CHCHD1	Q96BP2	118 aa	Known RBP	13.68	□□□□□ -0.22
TYROBP-208	ENST00000588439	TRAV8-3	A0A0A6YYJ7	113 aa		13.67	□□□□□ -0.22
TYROBP-208	ENST00000588439	LINC00310	P59036	64 aa		13.67	□□□□□ -0.22
TYROBP-208	ENST00000588439	MRPS36	P82909	103 aa	Known RBP	13.67	□□□□□ -0.22
TYROBP-208	ENST00000588439	C1orf134	Q5TEV5	83 aa		13.67	□□□□□ -0.22
TYROBP-208	ENST00000588439		Q6ZRN7	208 aa	Predicted RBP	13.67	□□□□□ -0.22
TYROBP-208	ENST00000588439	ZNF664	Q8N3J9	261 aa		13.67	□□□□□ -0.22
TYROBP-208	ENST00000588439	UBE2W	Q96B02	151 aa		13.67	□□□□□ -0.22
TYROBP-208	ENST00000588439	LINC01549	A6NIU2	74 aa		13.66	□□□□□ -0.22
TYROBP-208	ENST00000588439	IGIP	A6NJ69	53 aa		13.66	□□□□□ -0.22
TYROBP-208	ENST00000588439	REG3A	Q06141	175 aa		13.66	□□□□□ -0.22
TYROBP-208	ENST00000588439	DGAT2L7P	Q6IED9	249 aa		13.66	□□□□□ -0.22
TYROBP-208	ENST00000588439	BAGE3	Q86Y29	109 aa		13.66	□□□□□ -0.22
TYROBP-208	ENST00000588439	NPS	P0C0P6	89 aa		13.65	□□□□□ -0.22
TYROBP-208	ENST00000588439	MIA	Q16674	131 aa		13.65	□□□□□ -0.22
TYROBP-208	ENST00000588439		Q6ZUT4	128 aa		13.65	□□□□□ -0.22
TYROBP-208	ENST00000588439	NFE4	Q86UQ8	179 aa		13.65	□□□□□ -0.22
TYROBP-208	ENST00000588439	FAT2	Q9NYQ8	4349 aa		13.65	□□□□□ -0.22
TYROBP-208	ENST00000588439	RTL8C	O15255	209 aa		13.64	□□□□□ -0.23
TYROBP-208	ENST00000588439	CRP	P02741	224 aa		13.64	□□□□□ -0.23
TYROBP-208	ENST00000588439	TIMM17A	Q99595	171 aa		13.64	□□□□□ -0.23
TYROBP-208	ENST00000588439		Q9HAA7	133 aa		13.64	□□□□□ -0.23
TYROBP-208	ENST00000588439	IGLV4-3	A0A075B6K6	122 aa		13.63	□□□□□ -0.23
TYROBP-208	ENST00000588439	C1orf196	B1AJZ1	125 aa		13.63	□□□□□ -0.23
TYROBP-208	ENST00000588439	CLPSL2	Q6UWE3	100 aa		13.63	□□□□□ -0.23
TYROBP-208	ENST00000588439	SERF1A	O75920	110 aa		13.62	□□□□□ -0.23
TYROBP-208	ENST00000588439	HBD	P02042	147 aa		13.62	□□□□□ -0.23
TYROBP-208	ENST00000588439	ERAS	Q7Z444	233 aa		13.62	□□□□□ -0.23
TYROBP-208	ENST00000588439	OPRPN	Q99935	248 aa	Predicted RBP	13.62	□□□□□ -0.23
TYROBP-208	ENST00000588439	TRAV8-4	A0A0B4J246	113 aa		13.61	□□□□□ -0.23
TYROBP-208	ENST00000588439	PMCHL1	Q16048	86 aa		13.61	□□□□□ -0.23
TYROBP-208	ENST00000588439	PDZD11	Q5EBL8	140 aa		13.61	□□□□□ -0.23
TYROBP-208	ENST00000588439	NUPR1	O60356	82 aa		13.6	□□□□□ -0.23
TYROBP-208	ENST00000588439	COA6	Q5JTJ3	125 aa	Known RBP	13.6	□□□□□ -0.23
TYROBP-208	ENST00000588439	KRTAP26-1	Q6PEX3	210 aa		13.6	□□□□□ -0.23
TYROBP-208	ENST00000588439	RMI2	Q96E14	147 aa		13.6	□□□□□ -0.23
TYROBP-208	ENST00000588439	TMEM141	Q96I45	108 aa		13.6	□□□□□ -0.23
TYROBP-208	ENST00000588439	HSBP1	O75506	76 aa		13.59	□□□□□ -0.23
TYROBP-208	ENST00000588439	RNASE13	Q5GAN3	156 aa	Known RBP	13.59	□□□□□ -0.23
TYROBP-208	ENST00000588439	SCGB3A1	Q96QR1	104 aa		13.59	□□□□□ -0.23
TYROBP-208	ENST00000588439	AMELX	Q99217	191 aa		13.59	□□□□□ -0.23
TYROBP-208	ENST00000588439	TM2D2	Q9BX73	214 aa		13.59	□□□□□ -0.23
TYROBP-208	ENST00000588439	COX11	Q9Y6N1	276 aa		13.59	□□□□□ -0.23
TYROBP-208	ENST00000588439	LINC00959	A0A1B0GUT2	108 aa		13.58	□□□□□ -0.24
TYROBP-208	ENST00000588439	LINC00173	Q6ZV60	143 aa		13.58	□□□□□ -0.24
TYROBP-208	ENST00000588439	C1orf43	Q9BWL3	253 aa		13.58	□□□□□ -0.24
TYROBP-208	ENST00000588439	IGKV2D-24	A0A075B6R9	120 aa		13.57	□□□□□ -0.24
TYROBP-208	ENST00000588439	IGKV3OR2-268	A0A0C4DH90	116 aa		13.56	□□□□□ -0.24
TYROBP-208	ENST00000588439	CCL25	O15444	150 aa		13.56	□□□□□ -0.24
TYROBP-208	ENST00000588439	PAPPA-AS1	Q5QFB9	102 aa		13.56	□□□□□ -0.24
TYROBP-208	ENST00000588439	FAM19A2	Q8N3H0	131 aa		13.56	□□□□□ -0.24
TYROBP-208	ENST00000588439	MAPKAPK5-AS1	Q8N8E1	139 aa		13.56	□□□□□ -0.24
TYROBP-208	ENST00000588439	IGLV10-54	A0A075B6I4	117 aa		13.55	□□□□□ -0.24
TYROBP-208	ENST00000588439		Q6ZN92	141 aa		13.55	□□□□□ -0.24
TYROBP-208	ENST00000588439	DNAH11	Q96DT5	4516 aa		13.54	□□□□□ -0.24
TYROBP-208	ENST00000588439	TEX43	Q6ZNM6	134 aa		13.54	□□□□□ -0.24
TYROBP-208	ENST00000588439	LINC00336	Q6ZUF6	198 aa		13.54	□□□□□ -0.24
TYROBP-208	ENST00000588439	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.54	□□□□□ -0.24
TYROBP-208	ENST00000588439	VCX2	Q9H322	139 aa		13.54	□□□□□ -0.24
TYROBP-208	ENST00000588439	IFITM10	A6NMD0	228 aa		13.53	□□□□□ -0.24
TYROBP-208	ENST00000588439	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.53	□□□□□ -0.24
TYROBP-208	ENST00000588439	SS18	Q15532	418 aa		13.53	□□□□□ -0.24
TYROBP-208	ENST00000588439	ZC2HC1B	Q5TFG8	222 aa		13.53	□□□□□ -0.24
TYROBP-208	ENST00000588439	BAALC	Q8WXS3	180 aa		13.53	□□□□□ -0.24
TYROBP-208	ENST00000588439	TRAV13-1	A0A0B4J241	112 aa		13.52	□□□□□ -0.25
TYROBP-208	ENST00000588439	ATP5L	O75964	103 aa		13.52	□□□□□ -0.25
TYROBP-208	ENST00000588439	LRCOL1	A6NCL2	159 aa		13.51	□□□□□ -0.25
TYROBP-208	ENST00000588439	PSCA	O43653	123 aa		13.51	□□□□□ -0.25
TYROBP-208	ENST00000588439	UBE2D1	P51668	147 aa		13.51	□□□□□ -0.25
TYROBP-208	ENST00000588439	NDUFA6	P56556	154 aa		13.51	□□□□□ -0.25
TYROBP-208	ENST00000588439	TNP2	Q05952	138 aa		13.51	□□□□□ -0.25
TYROBP-208	ENST00000588439	FAM19A3	Q7Z5A8	133 aa		13.51	□□□□□ -0.25
TYROBP-208	ENST00000588439	C2orf88	Q9BSF0	95 aa		13.51	□□□□□ -0.25
TYROBP-208	ENST00000588439	FOXI1	Q12951	378 aa		13.5	□□□□□ -0.25
TYROBP-208	ENST00000588439	CD164L2	Q6UWJ8	174 aa		13.5	□□□□□ -0.25
TYROBP-208	ENST00000588439	GAGE12H	A6NDE8	117 aa		13.49	□□□□□ -0.25
TYROBP-208	ENST00000588439	XCL1	P47992	114 aa		13.49	□□□□□ -0.25
TYROBP-208	ENST00000588439	CST9L	Q9H4G1	147 aa		13.49	□□□□□ -0.25
TYROBP-208	ENST00000588439	PKD1	P98161	4303 aa		13.48	□□□□□ -0.25
TYROBP-208	ENST00000588439	PRSS29P	A6NIE9	313 aa		13.48	□□□□□ -0.25
TYROBP-208	ENST00000588439	LEPROTL1	O95214	131 aa		13.48	□□□□□ -0.25
TYROBP-208	ENST00000588439	PMVK	Q15126	192 aa		13.48	□□□□□ -0.25
TYROBP-208	ENST00000588439	LINC00242	Q5T6M2	205 aa		13.48	□□□□□ -0.25
TYROBP-208	ENST00000588439	IFI27L1	Q96BM0	104 aa		13.48	□□□□□ -0.25
TYROBP-208	ENST00000588439		A0A087WTM6	91 aa		13.47	□□□□□ -0.25
TYROBP-208	ENST00000588439	PACRG	Q96M98	296 aa	Predicted RBP	13.47	□□□□□ -0.25
TYROBP-208	ENST00000588439	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.46	□□□□□ -0.25
TYROBP-208	ENST00000588439	WFDC2	Q14508	124 aa		13.46	□□□□□ -0.25
TYROBP-208	ENST00000588439	HSPB8	Q9UJY1	196 aa		13.45	□□□□□ -0.26
TYROBP-208	ENST00000588439	TRAV12-1	A0A0B4J245	112 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms