RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 AMMECR1LQ6DCA0 310 aa7.74□□□□□ -1.17
VMP1-207ENST00000588131 Q6ZN92 141 aa7.74□□□□□ -1.17
VMP1-207ENST00000588131 WFDC10BQ8IUB3 73 aa7.74□□□□□ -1.17
VMP1-207ENST00000588131 Q8N3U1 123 aa7.74□□□□□ -1.17
VMP1-207ENST00000588131 Q8N976 141 aa7.74□□□□□ -1.17
VMP1-207ENST00000588131 IGLV4-60A0A075B6I1 120 aa7.73□□□□□ -1.17
VMP1-207ENST00000588131 TMEM262E9PQX1 116 aa7.73□□□□□ -1.17
VMP1-207ENST00000588131 PRSS1P07477 247 aa7.73□□□□□ -1.17
VMP1-207ENST00000588131 RBX1P62877 108 aa7.73□□□□□ -1.17
VMP1-207ENST00000588131 KLK5Q9Y337 293 aaPredicted RBP7.73□□□□□ -1.17
VMP1-207ENST00000588131 LINC00588Q9Y4M8 146 aa7.73□□□□□ -1.17
VMP1-207ENST00000588131 TRAV8-6A0A0B4J262 113 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 ZNF25P17030 456 aaPredicted RBP7.72□□□□□ -1.17
VMP1-207ENST00000588131 MRPS36P82909 103 aaKnown RBP7.72□□□□□ -1.17
VMP1-207ENST00000588131 DGAT2L7PQ6IED9 249 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 PET117Q6UWS5 81 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 OR5A1Q8NGJ0 315 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 MUC7Q8TAX7 377 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 WWC2-AS2Q96NR7 200 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 PMCHL2Q9BQD1 86 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 CDC42SE2Q9NRR3 84 aa7.72□□□□□ -1.17
VMP1-207ENST00000588131 CSDC2Q9Y534 153 aaKnown RBP7.72□□□□□ -1.17
VMP1-207ENST00000588131 PRSS29PA6NIE9 313 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 NPSP0C0P6 89 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 CCL18P55774 89 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 ODF1Q14990 250 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 JOSD1Q15040 202 aaPredicted RBP7.71□□□□□ -1.18
VMP1-207ENST00000588131 PMVKQ15126 192 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 PLECQ15149 4684 aaKnown RBP7.71□□□□□ -1.18
VMP1-207ENST00000588131 PYY3Q5JQD4 70 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 ZNF664Q8N3J9 261 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 TMEM101Q96IK0 257 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 AMELXQ99217 191 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 CST9LQ9H4G1 147 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 MRPS16Q9Y3D3 137 aaKnown RBP7.71□□□□□ -1.18
VMP1-207ENST00000588131 STARD9Q9P2P6 4700 aa7.71□□□□□ -1.18
VMP1-207ENST00000588131 A0A087WX48 190 aa7.7□□□□□ -1.18
VMP1-207ENST00000588131 TRAV12-1A0A0B4J245 112 aa7.7□□□□□ -1.18
VMP1-207ENST00000588131 A0A1B0GUV1 79 aa7.7□□□□□ -1.18
VMP1-207ENST00000588131 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
VMP1-207ENST00000588131 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
VMP1-207ENST00000588131 TEX43Q6ZNM6 134 aa7.7□□□□□ -1.18
VMP1-207ENST00000588131 VCX2Q9H322 139 aa7.7□□□□□ -1.18
VMP1-207ENST00000588131 SCGB1D1O95968 90 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 IGHV3-30P01768 117 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 IGHV3-33P01772 117 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 IGHV3-30-3P0DP02 117 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 IGHV3-30-5P0DP03 117 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 TCTAP57738 103 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 PKIAP61925 76 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 PAPPA-AS1Q5QFB9 102 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 CDPF1Q6NVV7 123 aa7.69□□□□□ -1.18
VMP1-207ENST00000588131 MRPL35Q9NZE8 188 aaKnown RBP7.69□□□□□ -1.18
VMP1-207ENST00000588131 CHTOPQ9Y3Y2 248 aaKnown RBP7.69□□□□□ -1.18
VMP1-207ENST00000588131 CSMD3Q7Z407 3707 aa7.68□□□□□ -1.18
VMP1-207ENST00000588131 IGLV4-69A0A075B6H9 119 aa7.68□□□□□ -1.18
VMP1-207ENST00000588131 C20orf202A1L168 122 aa7.68□□□□□ -1.18
VMP1-207ENST00000588131 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
VMP1-207ENST00000588131 ATOH7Q8N100 152 aa7.68□□□□□ -1.18
VMP1-207ENST00000588131 UPK3BQ9BT76 320 aa7.68□□□□□ -1.18
VMP1-207ENST00000588131 IGKV3OR2-268A0A0C4DH90 116 aa7.67□□□□□ -1.18
VMP1-207ENST00000588131 F8VRH5 84 aa7.67□□□□□ -1.18
VMP1-207ENST00000588131 ANGP03950 147 aaKnown RBP7.67□□□□□ -1.18
VMP1-207ENST00000588131 UBE2D1P51668 147 aa7.67□□□□□ -1.18
VMP1-207ENST00000588131 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
VMP1-207ENST00000588131 TRAV13-1A0A0B4J241 112 aa7.66□□□□□ -1.18
VMP1-207ENST00000588131 A0A0J9YXV3 536 aa7.66□□□□□ -1.18
VMP1-207ENST00000588131 DNAH10OSP0CZ25 163 aa7.66□□□□□ -1.18
VMP1-207ENST00000588131 LINC01556Q5JQF7 62 aa7.66□□□□□ -1.18
VMP1-207ENST00000588131 UBE2DNLQ8IWF7 75 aa7.66□□□□□ -1.18
VMP1-207ENST00000588131 LINC00269Q8N2A0 174 aa7.66□□□□□ -1.18
VMP1-207ENST00000588131 KLK12Q9UKR0 248 aa7.66□□□□□ -1.18
VMP1-207ENST00000588131 C11orf86A6NJI1 115 aa7.65□□□□□ -1.18
VMP1-207ENST00000588131 SIVA1O15304 175 aa7.65□□□□□ -1.18
VMP1-207ENST00000588131 DPM2O94777 84 aa7.65□□□□□ -1.18
VMP1-207ENST00000588131 IGKCP01834 107 aa7.65□□□□□ -1.18
VMP1-207ENST00000588131 SMIM6P0DI80 62 aa7.65□□□□□ -1.18
VMP1-207ENST00000588131 IGLC3P0DOY3 106 aa7.65□□□□□ -1.18
VMP1-207ENST00000588131 DNAH1Q9P2D7 4330 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 LINC00959A0A1B0GUT2 108 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 REG3AQ06141 175 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 MAJINQ3KP22 176 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 CASC10Q5T4H9 136 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 LINC00242Q5T6M2 205 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 ENHOQ6UWT2 76 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 NFE4Q86UQ8 179 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 CHAC1Q9BUX1 264 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 Q9H8V8 135 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 PRR34Q9NV39 138 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 VPS13DQ5THJ4 4388 aa7.64□□□□□ -1.19
VMP1-207ENST00000588131 TINCRA0A1B0GVN0 87 aa7.63□□□□□ -1.19
VMP1-207ENST00000588131 hDV102S1A0JD36 115 aa7.63□□□□□ -1.19
VMP1-207ENST00000588131 PLNP26678 52 aa7.63□□□□□ -1.19
VMP1-207ENST00000588131 COX6A2Q02221 97 aa7.63□□□□□ -1.19
VMP1-207ENST00000588131 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
VMP1-207ENST00000588131 RYR3Q15413 4870 aa7.63□□□□□ -1.19
VMP1-207ENST00000588131 C3orf84H3BNL1 204 aa7.62□□□□□ -1.19
VMP1-207ENST00000588131 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
VMP1-207ENST00000588131 UBE2WQ96B02 151 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms