RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TMEM238C9JI98 176 aa9.02□□□□□ -0.97
SMARCA4-208ENST00000585799 LYRM7Q5U5X0 104 aa9.01□□□□□ -0.97
SMARCA4-208ENST00000585799 H3BMG7 143 aa9.01□□□□□ -0.97
SMARCA4-208ENST00000585799 NDUFA7O95182 113 aa9.01□□□□□ -0.97
SMARCA4-208ENST00000585799 KRTAP1-1Q07627 177 aa9.01□□□□□ -0.97
SMARCA4-208ENST00000585799 CUBNO60494 3623 aa9.01□□□□□ -0.97
SMARCA4-208ENST00000585799 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 PAX4O43316 350 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 CIDEAO60543 219 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 C5orf38Q86SI9 138 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 SPANXA1Q9NS26 97 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 ZNF22P17026 224 aaPredicted RBP9□□□□□ -0.97
SMARCA4-208ENST00000585799 ZMAT4Q9H898 229 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 RS1O15537 224 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 CBY1Q9Y3M2 126 aa9□□□□□ -0.97
SMARCA4-208ENST00000585799 J3QR89 54 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 DNAJC30Q96LL9 226 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 CDKN2A-AS1Q9UH64 79 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 TRAV4A0A0B4J268 109 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 IGHV3-30-3P0DP02 117 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 LINC00158P58513 81 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 OR13C6PQ8NH95 151 aa8.99□□□□□ -0.97
SMARCA4-208ENST00000585799 DEFB121Q5J5C9 76 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 C16orf95Q9H693 158 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 IGLL5B9A064 214 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 LEPROTO15243 131 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 FHL3Q13643 280 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 Q9H8V8 135 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 A4D1N5 150 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 K7EP34 96 aa8.98□□□□□ -0.97
SMARCA4-208ENST00000585799 PFN2P35080 140 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 XCL1P47992 114 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 APOC4P55056 127 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 POM121L12Q8N7R1 296 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 C11orf72Q8NBR9 251 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 MUSTN1Q8IVN3 82 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 IGLV4-69A0A075B6H9 119 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 ETDBQ3ZM63 59 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 OXLD1Q5BKU9 147 aa8.97□□□□□ -0.97
SMARCA4-208ENST00000585799 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.97
SMARCA4-208ENST00000585799 RPL32P62910 135 aaKnown RBP8.96□□□□□ -0.97
SMARCA4-208ENST00000585799 RNASE8Q8TDE3 154 aaKnown RBP8.96□□□□□ -0.97
SMARCA4-208ENST00000585799 COX6CP09669 75 aa8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 TAL2Q16559 108 aa8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 DAZ4Q86SG3 579 aaKnown RBP8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 ATP6V0E2Q8NHE4 81 aa8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 DAZ3Q9NR90 486 aaKnown RBP8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 STAB1Q9NY15 2570 aa8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 LINC00694P0DN24 101 aa8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 C6orf226Q5I0X4 101 aa8.96□□□□□ -0.98
SMARCA4-208ENST00000585799 FAM110AQ9BQ89 295 aa8.95□□□□□ -0.98
SMARCA4-208ENST00000585799 COL6A5A8TX70 2615 aa8.95□□□□□ -0.98
SMARCA4-208ENST00000585799 MRAPQ8TCY5 172 aa8.95□□□□□ -0.98
SMARCA4-208ENST00000585799 ANGP03950 147 aaKnown RBP8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 MALP21145 153 aa8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 HERVK_113P63121 156 aa8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 HIVEP1P15822 2718 aa8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 PRO1854Q9UHT4 67 aa8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
SMARCA4-208ENST00000585799 TMEM223A0PJW6 202 aa8.93□□□□□ -0.98
SMARCA4-208ENST00000585799 OCIAD2Q56VL3 154 aa8.93□□□□□ -0.98
SMARCA4-208ENST00000585799 LINC01546A6NGU7 62 aa8.93□□□□□ -0.98
SMARCA4-208ENST00000585799 SH2D6Q7Z4S9 175 aa8.93□□□□□ -0.98
SMARCA4-208ENST00000585799 CHCHD7Q9BUK0 85 aa8.93□□□□□ -0.98
SMARCA4-208ENST00000585799 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
SMARCA4-208ENST00000585799 PRB2P02812 416 aaPredicted RBP8.92□□□□□ -0.98
SMARCA4-208ENST00000585799 INSL3P51460 131 aa8.92□□□□□ -0.98
SMARCA4-208ENST00000585799 KRTAP10-3P60369 221 aa8.92□□□□□ -0.98
SMARCA4-208ENST00000585799 WFDC2Q14508 124 aa8.92□□□□□ -0.98
SMARCA4-208ENST00000585799 TM2D2Q9BX73 214 aa8.92□□□□□ -0.98
SMARCA4-208ENST00000585799 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
SMARCA4-208ENST00000585799 NFE4Q86UQ8 179 aa8.91□□□□□ -0.98
SMARCA4-208ENST00000585799 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
SMARCA4-208ENST00000585799 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
SMARCA4-208ENST00000585799 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
SMARCA4-208ENST00000585799 SS18Q15532 418 aa8.91□□□□□ -0.98
SMARCA4-208ENST00000585799 BEAN1Q3B7T3 259 aa8.91□□□□□ -0.98
SMARCA4-208ENST00000585799 C9JAW5 83 aa8.9□□□□□ -0.98
SMARCA4-208ENST00000585799 NIPBLQ6KC79 2804 aaeCLIP8.9□□□□□ -0.986e-6■□□□□ 9.3
SMARCA4-208ENST00000585799 CKS1BP61024 79 aa8.9□□□□□ -0.99
SMARCA4-208ENST00000585799 SPATA3Q8NHX4 192 aa8.9□□□□□ -0.99
SMARCA4-208ENST00000585799 PRO0255Q9UI72 69 aa8.9□□□□□ -0.99
SMARCA4-208ENST00000585799 ATP5G1P05496 136 aa8.89□□□□□ -0.99
SMARCA4-208ENST00000585799 IGHV4-28A0A0C4DH34 117 aa8.89□□□□□ -0.99
SMARCA4-208ENST00000585799 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
SMARCA4-208ENST00000585799 SPART-AS1P0CW21 52 aa8.89□□□□□ -0.99
SMARCA4-208ENST00000585799 PCP4P48539 62 aa8.89□□□□□ -0.99
SMARCA4-208ENST00000585799 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
SMARCA4-208ENST00000585799 UBE2D3P61077 147 aa8.88□□□□□ -0.99
SMARCA4-208ENST00000585799 UBE2D2P62837 147 aa8.88□□□□□ -0.99
SMARCA4-208ENST00000585799 RPL13AP40429 203 aaKnown RBP8.88□□□□□ -0.99
SMARCA4-208ENST00000585799 COX6A2Q02221 97 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms