RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 RMI2Q96E14 147 aa8.84□□□□□ -0.99
TRIM47-202ENST00000585333 VCX2Q9H322 139 aa8.84□□□□□ -0.99
TRIM47-202ENST00000585333 TRAV8-3A0A0A6YYJ7 113 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 IGIPA6NJ69 53 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 LINC00310P59036 64 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 MPV17L2Q567V2 206 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 DEFB104AQ8WTQ1 72 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
TRIM47-202ENST00000585333 TMA7Q9Y2S6 64 aaKnown RBP8.83□□□□□ -1
TRIM47-202ENST00000585333 A0A096LNJ9 63 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 TRAV8-4A0A0B4J246 113 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 C5orf52A6NGY3 159 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 PMCHL1Q16048 86 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 MIAQ16674 131 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 LINC00476Q8WZB0 136 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 CDC42SE2Q9NRR3 84 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 COX11Q9Y6N1 276 aa8.82□□□□□ -1
TRIM47-202ENST00000585333 IGLV4-3A0A075B6K6 122 aa8.81□□□□□ -1
TRIM47-202ENST00000585333 PRSS1P07477 247 aa8.81□□□□□ -1
TRIM47-202ENST00000585333 SNRPEP62304 92 aaKnown RBP8.81□□□□□ -1
TRIM47-202ENST00000585333 PMVKQ15126 192 aa8.81□□□□□ -1
TRIM47-202ENST00000585333 NFE4Q86UQ8 179 aa8.81□□□□□ -1
TRIM47-202ENST00000585333 HIST3H2BBQ8N257 126 aa8.81□□□□□ -1
TRIM47-202ENST00000585333 TRAV12-1A0A0B4J245 112 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 C20orf202A1L168 122 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 LY6G6CO95867 125 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 IGHV3-30P01768 117 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 IGHV3-33P01772 117 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 IGHV3-30-3P0DP02 117 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 IGHV3-30-5P0DP03 117 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 REG3AQ06141 175 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 SS18Q15532 418 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 Q8N976 141 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 PRR34Q9NV39 138 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 KLK12Q9UKR0 248 aa8.8□□□□□ -1
TRIM47-202ENST00000585333 IFITM10A6NMD0 228 aa8.79□□□□□ -1
TRIM47-202ENST00000585333 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
TRIM47-202ENST00000585333 NUPR1O60356 82 aa8.79□□□□□ -1
TRIM47-202ENST00000585333 FABP4P15090 132 aa8.79□□□□□ -1
TRIM47-202ENST00000585333 Q6ZUT4 128 aa8.79□□□□□ -1
TRIM47-202ENST00000585333 AMELXQ99217 191 aa8.79□□□□□ -1
TRIM47-202ENST00000585333 TM2D2Q9BX73 214 aa8.79□□□□□ -1
TRIM47-202ENST00000585333 IGLV4-60A0A075B6I1 120 aa8.78□□□□□ -1
TRIM47-202ENST00000585333 NBDYA0A0U1RRE5 68 aa8.78□□□□□ -1
TRIM47-202ENST00000585333 LINC00269Q8N2A0 174 aa8.78□□□□□ -1
TRIM47-202ENST00000585333 BAALCQ8WXS3 180 aa8.78□□□□□ -1
TRIM47-202ENST00000585333 PET117Q6UWS5 81 aa8.77□□□□□ -1.01
TRIM47-202ENST00000585333 SPATA12Q7Z6I5 190 aa8.77□□□□□ -1.01
TRIM47-202ENST00000585333 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
TRIM47-202ENST00000585333 HIST1H2BLQ99880 126 aa8.77□□□□□ -1.01
TRIM47-202ENST00000585333 C1orf43Q9BWL3 253 aa8.77□□□□□ -1.01
TRIM47-202ENST00000585333 HERVK_113P63121 156 aa8.76□□□□□ -1.01
TRIM47-202ENST00000585333 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
TRIM47-202ENST00000585333 PLNP26678 52 aa8.75□□□□□ -1.01
TRIM47-202ENST00000585333 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
TRIM47-202ENST00000585333 DYNC2H1Q8NCM8 4307 aaKnown RBP8.75□□□□□ -1.01
TRIM47-202ENST00000585333 TRAV13-1A0A0B4J241 112 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 LCE6AA0A183 80 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 LINC00959A0A1B0GUT2 108 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 F8VRH5 84 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 SYS1-DBNDD2H3BUS1 97 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 UBE2D1P51668 147 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 KRTDAPP60985 99 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
TRIM47-202ENST00000585333 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
TRIM47-202ENST00000585333 SACSQ9NZJ4 4579 aa8.73□□□□□ -1.01
TRIM47-202ENST00000585333 IGKV3OR2-268A0A0C4DH90 116 aa8.73□□□□□ -1.01
TRIM47-202ENST00000585333 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
TRIM47-202ENST00000585333 H3BRM9 83 aa8.73□□□□□ -1.01
TRIM47-202ENST00000585333 CD164L2Q6UWJ8 174 aa8.73□□□□□ -1.01
TRIM47-202ENST00000585333 OPRPNQ99935 248 aaPredicted RBP8.73□□□□□ -1.01
TRIM47-202ENST00000585333 CSMD3Q7Z407 3707 aa8.72□□□□□ -1.01
TRIM47-202ENST00000585333 H0Y8G0 127 aa8.72□□□□□ -1.01
TRIM47-202ENST00000585333 RNASE13Q5GAN3 156 aaKnown RBP8.72□□□□□ -1.01
TRIM47-202ENST00000585333 ENHOQ6UWT2 76 aa8.72□□□□□ -1.01
TRIM47-202ENST00000585333 LINC00173Q6ZV60 143 aa8.72□□□□□ -1.01
TRIM47-202ENST00000585333 STARD9Q9P2P6 4700 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 IGKV2D-24A0A075B6R9 120 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 PSCAO43653 123 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 DPM2O94777 84 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 APOMO95445 188 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 C3orf79P0CE67 100 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 IGLC3P0DOY3 106 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 CFAP161Q6P656 301 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 Q8N3U1 123 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 CHCHD10Q8WYQ3 142 aaPredicted RBP8.71□□□□□ -1.02
TRIM47-202ENST00000585333 Q9HAA7 133 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 RYR2Q92736 4967 aa8.71□□□□□ -1.02
TRIM47-202ENST00000585333 ODF1Q14990 250 aa8.7□□□□□ -1.02
TRIM47-202ENST00000585333 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
TRIM47-202ENST00000585333 Q6ZR54 194 aa8.7□□□□□ -1.02
TRIM47-202ENST00000585333 C6orf223Q8N319 242 aa8.7□□□□□ -1.02
TRIM47-202ENST00000585333 OR10D4PQ8NGN7 298 aa8.7□□□□□ -1.02
TRIM47-202ENST00000585333 FAM104AQ969W3 186 aa8.7□□□□□ -1.02
TRIM47-202ENST00000585333 CHAC1Q9BUX1 264 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms