RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 OR5A1Q8NGJ0 315 aa10.99□□□□□ -0.65
SS18-226ENST00000585241 TMEM101Q96IK0 257 aa10.99□□□□□ -0.65
SS18-226ENST00000585241 CDC42SE2Q9NRR3 84 aa10.99□□□□□ -0.65
SS18-226ENST00000585241 TMEM262E9PQX1 116 aa10.98□□□□□ -0.65
SS18-226ENST00000585241 PAPPA-AS1Q5QFB9 102 aa10.98□□□□□ -0.65
SS18-226ENST00000585241 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
SS18-226ENST00000585241 BAALCQ8WXS3 180 aa10.98□□□□□ -0.65
SS18-226ENST00000585241 AMELXQ99217 191 aa10.98□□□□□ -0.65
SS18-226ENST00000585241 A0A087WX48 190 aa10.97□□□□□ -0.65
SS18-226ENST00000585241 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
SS18-226ENST00000585241 ZNF664Q8N3J9 261 aa10.97□□□□□ -0.65
SS18-226ENST00000585241 Q8N3U1 123 aa10.97□□□□□ -0.65
SS18-226ENST00000585241 Q8N976 141 aa10.97□□□□□ -0.65
SS18-226ENST00000585241 OPRPNQ99935 248 aaPredicted RBP10.97□□□□□ -0.65
SS18-226ENST00000585241 TRAV12-1A0A0B4J245 112 aa10.96□□□□□ -0.65
SS18-226ENST00000585241 SIVA1O15304 175 aa10.96□□□□□ -0.65
SS18-226ENST00000585241 C3orf79P0CE67 100 aa10.96□□□□□ -0.65
SS18-226ENST00000585241 Q6ZN92 141 aa10.96□□□□□ -0.65
SS18-226ENST00000585241 MAP1LC3CQ9BXW4 147 aa10.96□□□□□ -0.65
SS18-226ENST00000585241 SYS1-DBNDD2H3BUS1 97 aa10.95□□□□□ -0.66
SS18-226ENST00000585241 PMVKQ15126 192 aa10.95□□□□□ -0.66
SS18-226ENST00000585241 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
SS18-226ENST00000585241 VPS13DQ5THJ4 4388 aa10.95□□□□□ -0.66
SS18-226ENST00000585241 LGALS9CQ6DKI2 356 aa10.94□□□□□ -0.66
SS18-226ENST00000585241 TEX43Q6ZNM6 134 aa10.94□□□□□ -0.66
SS18-226ENST00000585241 OR10D4PQ8NGN7 298 aa10.94□□□□□ -0.66
SS18-226ENST00000585241 VCX2Q9H322 139 aa10.94□□□□□ -0.66
SS18-226ENST00000585241 Q9H8V8 135 aa10.94□□□□□ -0.66
SS18-226ENST00000585241 PRR34Q9NV39 138 aa10.94□□□□□ -0.66
SS18-226ENST00000585241 TENM2Q9NT68 2774 aa10.94□□□□□ -0.66
SS18-226ENST00000585241 K7EP13 123 aa10.93□□□□□ -0.66
SS18-226ENST00000585241 PRSS1P07477 247 aa10.93□□□□□ -0.66
SS18-226ENST00000585241 PET117Q6UWS5 81 aa10.93□□□□□ -0.66
SS18-226ENST00000585241 CST9LQ9H4G1 147 aa10.93□□□□□ -0.66
SS18-226ENST00000585241 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 PRSS29PA6NIE9 313 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 IGHV3-30P01768 117 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 IGHV3-33P01772 117 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 ANGP03950 147 aaKnown RBP10.92□□□□□ -0.66
SS18-226ENST00000585241 IGHV3-30-3P0DP02 117 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 IGHV3-30-5P0DP03 117 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 KRTDAPP60985 99 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
SS18-226ENST00000585241 ZC2HC1BQ5TFG8 222 aa10.92□□□□□ -0.66
SS18-226ENST00000585241 ODF1Q14990 250 aa10.91□□□□□ -0.66
SS18-226ENST00000585241 LINC01545Q5VT33 79 aa10.91□□□□□ -0.66
SS18-226ENST00000585241 FAM19A3Q7Z5A8 133 aa10.91□□□□□ -0.66
SS18-226ENST00000585241 C2orf88Q9BSF0 95 aa10.91□□□□□ -0.66
SS18-226ENST00000585241 UBE2D1P51668 147 aa10.9□□□□□ -0.66
SS18-226ENST00000585241 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
SS18-226ENST00000585241 C10orf126Q8N4M7 172 aa10.9□□□□□ -0.66
SS18-226ENST00000585241 KLK12Q9UKR0 248 aa10.9□□□□□ -0.66
SS18-226ENST00000585241 ALMS1Q8TCU4 4167 aa10.9□□□□□ -0.67
SS18-226ENST00000585241 F8VRH5 84 aa10.89□□□□□ -0.67
SS18-226ENST00000585241 CCL25O15444 150 aa10.89□□□□□ -0.67
SS18-226ENST00000585241 REG3AQ06141 175 aa10.89□□□□□ -0.67
SS18-226ENST00000585241 IGLV4-69A0A075B6H9 119 aa10.88□□□□□ -0.67
SS18-226ENST00000585241 LINC00959A0A1B0GUT2 108 aa10.88□□□□□ -0.67
SS18-226ENST00000585241 IBA57-AS1B1ANH7 110 aa10.88□□□□□ -0.67
SS18-226ENST00000585241 ENHOQ6UWT2 76 aa10.88□□□□□ -0.67
SS18-226ENST00000585241 LINC00476Q8WZB0 136 aa10.88□□□□□ -0.67
SS18-226ENST00000585241 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
SS18-226ENST00000585241 LYSTQ99698 3801 aa10.88□□□□□ -0.67
SS18-226ENST00000585241 DNAH1Q9P2D7 4330 aa10.88□□□□□ -0.67
SS18-226ENST00000585241 TRAV9-2A0A087WT02 112 aa10.87□□□□□ -0.67
SS18-226ENST00000585241 H0Y8G0 127 aa10.87□□□□□ -0.67
SS18-226ENST00000585241 IGLC3P0DOY3 106 aa10.87□□□□□ -0.67
SS18-226ENST00000585241 NFE4Q86UQ8 179 aa10.87□□□□□ -0.67
SS18-226ENST00000585241 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
SS18-226ENST00000585241 TRAV13-1A0A0B4J241 112 aa10.86□□□□□ -0.67
SS18-226ENST00000585241 C20orf202A1L168 122 aa10.86□□□□□ -0.67
SS18-226ENST00000585241 CRPP02741 224 aa10.86□□□□□ -0.67
SS18-226ENST00000585241 JOSD1Q15040 202 aaPredicted RBP10.86□□□□□ -0.67
SS18-226ENST00000585241 MIAQ16674 131 aa10.86□□□□□ -0.67
SS18-226ENST00000585241 TTC32Q5I0X7 151 aa10.86□□□□□ -0.67
SS18-226ENST00000585241 LINC00242Q5T6M2 205 aa10.86□□□□□ -0.67
SS18-226ENST00000585241 CLPSL2Q6UWE3 100 aa10.86□□□□□ -0.67
SS18-226ENST00000585241 TRAV8-4A0A0B4J246 113 aa10.85□□□□□ -0.67
SS18-226ENST00000585241 A0A0J9YXV3 536 aa10.85□□□□□ -0.67
SS18-226ENST00000585241 TINCRA0A1B0GVN0 87 aa10.85□□□□□ -0.67
SS18-226ENST00000585241 AKR1D1P51857 326 aa10.85□□□□□ -0.67
SS18-226ENST00000585241 SEC11AP67812 179 aa10.85□□□□□ -0.67
SS18-226ENST00000585241 UBE2WQ96B02 151 aa10.85□□□□□ -0.67
SS18-226ENST00000585241 KRTAP1-5Q9BYS1 174 aa10.85□□□□□ -0.67
SS18-226ENST00000585241 DNAH6Q9C0G6 4158 aa10.84□□□□□ -0.67
SS18-226ENST00000585241 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
SS18-226ENST00000585241 NBDYA0A0U1RRE5 68 aa10.84□□□□□ -0.67
SS18-226ENST00000585241 PLNP26678 52 aa10.84□□□□□ -0.67
SS18-226ENST00000585241 SS18Q15532 418 aa10.84□□□□□ -0.67
SS18-226ENST00000585241 PMCHL2Q9BQD1 86 aa10.84□□□□□ -0.67
SS18-226ENST00000585241 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.68
SS18-226ENST00000585241 IGKV3OR2-268A0A0C4DH90 116 aa10.83□□□□□ -0.68
SS18-226ENST00000585241 C11orf86A6NJI1 115 aa10.83□□□□□ -0.68
SS18-226ENST00000585241 DPM2O94777 84 aa10.83□□□□□ -0.68
SS18-226ENST00000585241 PYY3Q5JQD4 70 aa10.83□□□□□ -0.68
SS18-226ENST00000585241 CHAC1Q9BUX1 264 aa10.83□□□□□ -0.68
SS18-226ENST00000585241 IGKCP01834 107 aa10.82□□□□□ -0.68
SS18-226ENST00000585241 HERVK_113P63121 156 aa10.82□□□□□ -0.68
SS18-226ENST00000585241 KRTAP26-1Q6PEX3 210 aa10.82□□□□□ -0.68
SS18-226ENST00000585241 CHCHD10Q8WYQ3 142 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms