RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 K7EP13 123 aa-0.38□□□□□ -2.47
TRAPPC8-212ENST00000584604 PPRC1Q5VV67 1664 aaKnown RBP-0.38□□□□□ -2.47
TRAPPC8-212ENST00000584604 NAIPQ13075 1403 aa-0.38□□□□□ -2.47
TRAPPC8-212ENST00000584604 STAB1Q9NY15 2570 aa-0.39□□□□□ -2.47
TRAPPC8-212ENST00000584604 BAGE2Q86Y30 109 aa-0.39□□□□□ -2.47
TRAPPC8-212ENST00000584604 MGST2Q99735 147 aa-0.39□□□□□ -2.47
TRAPPC8-212ENST00000584604 TP53AIP1Q9HCN2 124 aa-0.39□□□□□ -2.47
TRAPPC8-212ENST00000584604 MUC12Q9UKN1 5478 aa-0.4□□□□□ -2.47
TRAPPC8-212ENST00000584604 LOC100130705A0A1B0GUX0 176 aa-0.4□□□□□ -2.47
TRAPPC8-212ENST00000584604 FGF7P21781 194 aa-0.4□□□□□ -2.47
TRAPPC8-212ENST00000584604 LINC00472Q9H8W2 130 aa-0.4□□□□□ -2.47
TRAPPC8-212ENST00000584604 CPSF1Q10570 1443 aaKnown RBP-0.4□□□□□ -2.47
TRAPPC8-212ENST00000584604 DSTQ03001 7570 aaKnown RBP-0.41□□□□□ -2.47
TRAPPC8-212ENST00000584604 HSPG2P98160 4391 aa-0.41□□□□□ -2.47
TRAPPC8-212ENST00000584604 TENM4Q6N022 2769 aa-0.41□□□□□ -2.47
TRAPPC8-212ENST00000584604 TRBV7-3A0A075B6L6 115 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 F8VRH5 84 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 SPRR1AP35321 89 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 CATR1Q13166 79 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 TSLPQ969D9 159 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 SPANXDQ9BXN6 97 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 DYNLRB1Q9NP97 96 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 MUC2Q02817 5179 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 USF3Q68DE3 2245 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 LRP2P98164 4655 aa-0.41□□□□□ -2.48
TRAPPC8-212ENST00000584604 KIF21AQ7Z4S6 1674 aa-0.42□□□□□ -2.48
TRAPPC8-212ENST00000584604 UQCR11O14957 56 aa-0.42□□□□□ -2.48
TRAPPC8-212ENST00000584604 APOC2P02655 101 aa-0.42□□□□□ -2.48
TRAPPC8-212ENST00000584604 Q6JHZ5 121 aa-0.42□□□□□ -2.48
TRAPPC8-212ENST00000584604 FLNAP21333 2647 aaKnown RBP-0.42□□□□□ -2.48
TRAPPC8-212ENST00000584604 I3L2K1 104 aa-0.43□□□□□ -2.48
TRAPPC8-212ENST00000584604 TPPP2P59282 170 aa-0.43□□□□□ -2.48
TRAPPC8-212ENST00000584604 C8orf59Q8N0T1 100 aaPredicted RBP-0.43□□□□□ -2.48
TRAPPC8-212ENST00000584604 C1orf54Q8WWF1 131 aa-0.43□□□□□ -2.48
TRAPPC8-212ENST00000584604 SBF2Q86WG5 1849 aa-0.43□□□□□ -2.48
TRAPPC8-212ENST00000584604 C10orf71Q711Q0 1435 aa-0.44□□□□□ -2.48
TRAPPC8-212ENST00000584604 APOC3P02656 99 aa-0.44□□□□□ -2.48
TRAPPC8-212ENST00000584604 DCDP81605 110 aaKnown RBP-0.44□□□□□ -2.48
TRAPPC8-212ENST00000584604 RIMS1Q86UR5 1692 aaKnown RBP-0.44□□□□□ -2.48
TRAPPC8-212ENST00000584604 MYO7BQ6PIF6 2116 aa-0.44□□□□□ -2.48
TRAPPC8-212ENST00000584604 SPTBN1Q01082 2364 aaKnown RBP-0.45□□□□□ -2.48
TRAPPC8-212ENST00000584604 IGLC7A0M8Q6 106 aa-0.45□□□□□ -2.48
TRAPPC8-212ENST00000584604 LINC01558Q9Y6Z2 57 aa-0.45□□□□□ -2.48
TRAPPC8-212ENST00000584604 ZANQ9Y493 2812 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 CHD6Q8TD26 2715 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 SRRM2Q9UQ35 2752 aaKnown RBP-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 FXYD6-FXYD2A0A087WZ82 144 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 HMGN4O00479 90 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 IFNGP01579 166 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 COMMD6Q7Z4G1 85 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 C5orf38Q86SI9 138 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 VWFP04275 2813 aa-0.46□□□□□ -2.48
TRAPPC8-212ENST00000584604 PKD1L1Q8TDX9 2849 aa-0.47□□□□□ -2.48
TRAPPC8-212ENST00000584604 SSSCA1O60232 199 aa-0.47□□□□□ -2.48
TRAPPC8-212ENST00000584604 FAT2Q9NYQ8 4349 aa-0.47□□□□□ -2.48
TRAPPC8-212ENST00000584604 BCL9LQ86UU0 1499 aa-0.48□□□□□ -2.49
TRAPPC8-212ENST00000584604 TRBV6-1A0A0K0K1D8 114 aa-0.48□□□□□ -2.49
TRAPPC8-212ENST00000584604 AKAIN1P0CW23 69 aa-0.48□□□□□ -2.49
TRAPPC8-212ENST00000584604 PIGYQ3MUY2 71 aa-0.48□□□□□ -2.49
TRAPPC8-212ENST00000584604 PSME4Q14997 1843 aa-0.48□□□□□ -2.49
TRAPPC8-212ENST00000584604 LOC285095A0A1B0GVY8 99 aa-0.49□□□□□ -2.49
TRAPPC8-212ENST00000584604 SPRR2DP22532 72 aa-0.49□□□□□ -2.49
TRAPPC8-212ENST00000584604 PP6455Q8WZ26 134 aa-0.5□□□□□ -2.49
TRAPPC8-212ENST00000584604 LINC00474Q9P2X8 69 aa-0.5□□□□□ -2.49
TRAPPC8-212ENST00000584604 PAPPAQ13219 1627 aa-0.5□□□□□ -2.49
TRAPPC8-212ENST00000584604 QRICH2Q9H0J4 1663 aa-0.5□□□□□ -2.49
TRAPPC8-212ENST00000584604 DCHS2Q6V1P9 2916 aa-0.51□□□□□ -2.49
TRAPPC8-212ENST00000584604 ALMS1Q8TCU4 4167 aa-0.51□□□□□ -2.49
TRAPPC8-212ENST00000584604 OOSP1A8MZH6 123 aa-0.51□□□□□ -2.49
TRAPPC8-212ENST00000584604 PRM1P04553 51 aa-0.51□□□□□ -2.49
TRAPPC8-212ENST00000584604 KRTAP19-7Q3SYF9 63 aa-0.51□□□□□ -2.49
TRAPPC8-212ENST00000584604 BSNQ9UPA5 3926 aa-0.51□□□□□ -2.49
TRAPPC8-212ENST00000584604 A2ML1A8K2U0 1454 aa-0.52□□□□□ -2.49
TRAPPC8-212ENST00000584604 ROCK2O75116 1388 aaKnown RBP-0.52□□□□□ -2.49
TRAPPC8-212ENST00000584604 KTN1Q86UP2 1357 aaKnown RBP-0.52□□□□□ -2.49
TRAPPC8-212ENST00000584604 SFT2D2O95562 160 aa-0.52□□□□□ -2.49
TRAPPC8-212ENST00000584604 MRPL54Q6P161 138 aaKnown RBP-0.52□□□□□ -2.49
TRAPPC8-212ENST00000584604 MYOZ3Q8TDC0 251 aa-0.52□□□□□ -2.49
TRAPPC8-212ENST00000584604 ROBO1Q9Y6N7 1651 aa-0.53□□□□□ -2.49
TRAPPC8-212ENST00000584604 SHROOM2Q13796 1616 aa-0.53□□□□□ -2.49
TRAPPC8-212ENST00000584604 HECTD4Q9Y4D8 3996 aa-0.53□□□□□ -2.49
TRAPPC8-212ENST00000584604 APC2O95996 2303 aa-0.53□□□□□ -2.49
TRAPPC8-212ENST00000584604 TNXBP22105 4242 aa-0.53□□□□□ -2.49
TRAPPC8-212ENST00000584604 TNFP01375 233 aa-0.53□□□□□ -2.49
TRAPPC8-212ENST00000584604 GOLGA4Q13439 2230 aaKnown RBP-0.54□□□□□ -2.5
TRAPPC8-212ENST00000584604 SHANK2Q9UPX8 1470 aa-0.54□□□□□ -2.5
TRAPPC8-212ENST00000584604 MYOM1P52179 1685 aa-0.55□□□□□ -2.5
TRAPPC8-212ENST00000584604 CHKB-CPT1BH3BT56 60 aa-0.55□□□□□ -2.5
TRAPPC8-212ENST00000584604 C9orf153Q5TBE3 101 aa-0.55□□□□□ -2.5
TRAPPC8-212ENST00000584604 RPL13AP3Q6NVV1 102 aa-0.55□□□□□ -2.5
TRAPPC8-212ENST00000584604 PDZD2O15018 2839 aa-0.55□□□□□ -2.5
TRAPPC8-212ENST00000584604 TENM2Q9NT68 2774 aa-0.55□□□□□ -2.5
TRAPPC8-212ENST00000584604 GVINP1Q7Z2Y8 2422 aa-0.55□□□□□ -2.5
TRAPPC8-212ENST00000584604 RAPGEF6Q8TEU7 1601 aa-0.56□□□□□ -2.5
TRAPPC8-212ENST00000584604 CSPG4Q6UVK1 2322 aa-0.56□□□□□ -2.5
TRAPPC8-212ENST00000584604 MGPP08493 103 aa-0.57□□□□□ -2.5
TRAPPC8-212ENST00000584604 MAP1BP46821 2468 aaKnown RBP-0.58□□□□□ -2.5
TRAPPC8-212ENST00000584604 UBE2L5PA0A1B0GUS4 154 aa-0.58□□□□□ -2.5
TRAPPC8-212ENST00000584604 UBE2L3P68036 154 aaKnown RBP-0.58□□□□□ -2.5
TRAPPC8-212ENST00000584604 NXT2Q9NPJ8 142 aaKnown RBP-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms