RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.56□□□□□ -1.84
NUP85-221ENST00000583548 IGKV2-29A2NJV5 120 aaPredicted RBP3.56□□□□□ -1.84
NUP85-221ENST00000583548 CENPXA8MT69 81 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 BCE1O60756 84 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 CXorf1O96002 111 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 LRRC37A5PQ49AS3 106 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 GAGE2EQ4V326 116 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 Q6ZNX1 250 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 SMDT1Q9H4I9 107 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 LINC00846Q9NV44 126 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 GAGE2DQ9UEU5 116 aa3.56□□□□□ -1.84
NUP85-221ENST00000583548 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
NUP85-221ENST00000583548 MUC21A0A140T8X8 626 aa3.55□□□□□ -1.84
NUP85-221ENST00000583548 SSTP61278 116 aa3.55□□□□□ -1.84
NUP85-221ENST00000583548 KRTAP7-1Q8IUC3 87 aa3.55□□□□□ -1.84
NUP85-221ENST00000583548 RAB24Q969Q5 203 aa3.55□□□□□ -1.84
NUP85-221ENST00000583548 FAM210AQ96ND0 272 aa3.55□□□□□ -1.84
NUP85-221ENST00000583548 ANAPC11Q9NYG5 84 aa3.55□□□□□ -1.84
NUP85-221ENST00000583548 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
NUP85-221ENST00000583548 LTAP01374 205 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 TRGC1P0CF51 173 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 CTRLP40313 264 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 TCEAL7Q9BRU2 100 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 CYTL1Q9NRR1 136 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 ALG5Q9Y673 324 aa3.54□□□□□ -1.84
NUP85-221ENST00000583548 IGLV8-61A0A075B6I0 122 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 MBP02144 154 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 DEFA3P59666 94 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 SMAGPQ0VAQ4 97 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 TRIQKQ629K1 86 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 MRPL52Q86TS9 123 aaKnown RBP3.53□□□□□ -1.84
NUP85-221ENST00000583548 FAM19A2Q8N3H0 131 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 MRAP2Q96G30 205 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 CDC42SE2Q9NRR3 84 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 HSPB11Q9Y547 144 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 V9GYH0 126 aa3.53□□□□□ -1.84
NUP85-221ENST00000583548 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
NUP85-221ENST00000583548 NDUFC2-KCTD14E9PQ53 114 aa3.52□□□□□ -1.85
NUP85-221ENST00000583548 S100A5P33763 92 aa3.52□□□□□ -1.85
NUP85-221ENST00000583548 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
NUP85-221ENST00000583548 C5orf38Q86SI9 138 aa3.52□□□□□ -1.85
NUP85-221ENST00000583548 ORAOV1Q8WV07 137 aa3.52□□□□□ -1.85
NUP85-221ENST00000583548 PACRGQ96M98 296 aaPredicted RBP3.52□□□□□ -1.85
NUP85-221ENST00000583548 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
NUP85-221ENST00000583548 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
NUP85-221ENST00000583548 TRBV30A0A0K0K1B3 111 aa3.51□□□□□ -1.85
NUP85-221ENST00000583548 F2Z2F3 143 aa3.51□□□□□ -1.85
NUP85-221ENST00000583548 KRTAP4-16G5E9R7 235 aaPredicted RBP3.51□□□□□ -1.85
NUP85-221ENST00000583548 SPINK1P00995 79 aa3.51□□□□□ -1.85
NUP85-221ENST00000583548 S100A9P06702 114 aaKnown RBP3.51□□□□□ -1.85
NUP85-221ENST00000583548 PET100P0DJ07 73 aa3.51□□□□□ -1.85
NUP85-221ENST00000583548 UBE2AP49459 152 aa3.51□□□□□ -1.85
NUP85-221ENST00000583548 ACTR3CQ9C0K3 210 aaPredicted RBP3.51□□□□□ -1.85
NUP85-221ENST00000583548 C6orf48Q9UBA6 75 aa3.51□□□□□ -1.85
NUP85-221ENST00000583548 C22orf24Q9Y442 160 aa3.51□□□□□ -1.85
NUP85-221ENST00000583548 SDHAF1A6NFY7 115 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 FAM74A7A6NL05 159 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 I3L3M4 83 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 PMCHP20382 165 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 BTCP35070 178 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 AKR1C3P42330 323 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 UBE2G2P60604 165 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 SERF2P84101 59 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 C9orf129Q5T035 196 aaKnown RBP3.5□□□□□ -1.85
NUP85-221ENST00000583548 C10orf25Q5T742 122 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 TEX261Q6UWH6 196 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 UNQ6190/PRO20217Q6UXQ8 127 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 MRPL55Q7Z7F7 128 aaKnown RBP3.5□□□□□ -1.85
NUP85-221ENST00000583548 SEC22CQ9BRL7 303 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 PSMG3Q9BT73 122 aaPredicted RBP3.5□□□□□ -1.85
NUP85-221ENST00000583548 TPPP3Q9BW30 176 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 SMIM3Q9BZL3 60 aa3.5□□□□□ -1.85
NUP85-221ENST00000583548 TRAV13-1A0A0B4J241 112 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 XKRY2A2RUG3 117 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 ATP6V1G2O95670 118 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 IGLC6P0CF74 106 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 RPS20P60866 119 aaKnown RBP3.49□□□□□ -1.85
NUP85-221ENST00000583548 PCOTHQ58A44 107 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 MZT2BQ6NZ67 158 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 STOML3Q8TAV4 291 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 CCDC32Q9BV29 185 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 TNFSF18Q9UNG2 199 aa3.49□□□□□ -1.85
NUP85-221ENST00000583548 CSDC2Q9Y534 153 aaKnown RBP3.49□□□□□ -1.85
NUP85-221ENST00000583548 C7orf77A4D0Y5 90 aa3.48□□□□□ -1.85
NUP85-221ENST00000583548 H0YIZ8 118 aa3.48□□□□□ -1.85
NUP85-221ENST00000583548 NOL3O60936 208 aaKnown RBP3.48□□□□□ -1.85
NUP85-221ENST00000583548 FHITP49789 147 aa3.48□□□□□ -1.85
NUP85-221ENST00000583548 KRTAP13-1Q8IUC0 172 aa3.48□□□□□ -1.85
NUP85-221ENST00000583548 GATD1Q8NB37 220 aa3.48□□□□□ -1.85
NUP85-221ENST00000583548 RAB19A4D1S5 217 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 CCDC160A6NGH7 325 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 ATP6V0CP27449 155 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 RPS29P62273 56 aaKnown RBP3.47□□□□□ -1.85
NUP85-221ENST00000583548 LYZL1Q6UWQ5 148 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 SMIM15Q7Z3B0 74 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 BAGE2Q86Y30 109 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 C3orf22Q8N5N4 141 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms