RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 SPXQ9BT56 116 aa9.9□□□□□ -0.82
SRSF1-205ENST00000582730 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.82
SRSF1-205ENST00000582730 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
SRSF1-205ENST00000582730 C9JAW5 83 aa9.9□□□□□ -0.82
SRSF1-205ENST00000582730 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.82
SRSF1-205ENST00000582730 CITED1Q99966 193 aa9.9□□□□□ -0.82
SRSF1-205ENST00000582730 RHODO00212 210 aa9.89□□□□□ -0.83
SRSF1-205ENST00000582730 GAGE5Q13069 117 aa9.89□□□□□ -0.83
SRSF1-205ENST00000582730 GAGE6Q13070 117 aa9.89□□□□□ -0.83
SRSF1-205ENST00000582730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.89□□□□□ -0.83
SRSF1-205ENST00000582730 IGKV2-29A2NJV5 120 aaPredicted RBP9.89□□□□□ -0.83
SRSF1-205ENST00000582730 LGALS3P17931 250 aaKnown RBP9.89□□□□□ -0.83
SRSF1-205ENST00000582730 AMELXQ99217 191 aa9.89□□□□□ -0.83
SRSF1-205ENST00000582730 B5MCH6 92 aa9.88□□□□□ -0.83
SRSF1-205ENST00000582730 NHLRC4P0CG21 123 aaPredicted RBP9.88□□□□□ -0.83
SRSF1-205ENST00000582730 A4D1N5 150 aa9.88□□□□□ -0.83
SRSF1-205ENST00000582730 H7C2G1 150 aa9.88□□□□□ -0.83
SRSF1-205ENST00000582730 C16orf95Q9H693 158 aa9.88□□□□□ -0.83
SRSF1-205ENST00000582730 KMT2BQ9UMN6 2715 aaPredicted RBP9.88□□□□□ -0.83
SRSF1-205ENST00000582730 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
SRSF1-205ENST00000582730 HILS1P60008 231 aa9.87□□□□□ -0.83
SRSF1-205ENST00000582730 SETXQ7Z333 2677 aaKnown RBP9.87□□□□□ -0.83
SRSF1-205ENST00000582730 J3QQQ9 107 aa9.87□□□□□ -0.83
SRSF1-205ENST00000582730 GCN1Q92616 2671 aaKnown RBP9.86□□□□□ -0.83
SRSF1-205ENST00000582730 IGHV3-33P01772 117 aa9.86□□□□□ -0.83
SRSF1-205ENST00000582730 Q6ZTI0 123 aa9.86□□□□□ -0.83
SRSF1-205ENST00000582730 C2CD3Q4AC94 2353 aa9.86□□□□□ -0.83
SRSF1-205ENST00000582730 RS1O15537 224 aa9.86□□□□□ -0.83
SRSF1-205ENST00000582730 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
SRSF1-205ENST00000582730 LINC00467Q9BRT7 94 aa9.86□□□□□ -0.83
SRSF1-205ENST00000582730 EDA2RQ9HAV5 297 aa9.86□□□□□ -0.83
SRSF1-205ENST00000582730 TRAV4A0A0B4J268 109 aa9.85□□□□□ -0.83
SRSF1-205ENST00000582730 CRLF1O75462 422 aa9.85□□□□□ -0.83
SRSF1-205ENST00000582730 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
SRSF1-205ENST00000582730 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
SRSF1-205ENST00000582730 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
SRSF1-205ENST00000582730 PIK3CD-AS1Q5SR53 167 aa9.85□□□□□ -0.83
SRSF1-205ENST00000582730 NOP10Q9NPE3 64 aaKnown RBP9.85□□□□□ -0.83
SRSF1-205ENST00000582730 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
SRSF1-205ENST00000582730 NTN5Q8WTR8 489 aaPredicted RBP9.85□□□□□ -0.83
SRSF1-205ENST00000582730 TMEM263Q8WUH6 116 aaKnown RBP9.85□□□□□ -0.83
SRSF1-205ENST00000582730 SNCGO76070 127 aa9.84□□□□□ -0.83
SRSF1-205ENST00000582730 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
SRSF1-205ENST00000582730 TMEM223A0PJW6 202 aa9.84□□□□□ -0.83
SRSF1-205ENST00000582730 PF4P02776 101 aa9.84□□□□□ -0.83
SRSF1-205ENST00000582730 M0QXV9 152 aa9.83□□□□□ -0.84
SRSF1-205ENST00000582730 IGLV1-51P01701 117 aa9.83□□□□□ -0.84
SRSF1-205ENST00000582730 NDUFV3P56181 108 aaKnown RBP9.83□□□□□ -0.84
SRSF1-205ENST00000582730 DGAT2L7PQ6IED9 249 aa9.83□□□□□ -0.84
SRSF1-205ENST00000582730 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
SRSF1-205ENST00000582730 FN1P02751 2386 aaKnown RBP9.83□□□□□ -0.84
SRSF1-205ENST00000582730 ADARB2-AS1A8MUL3 147 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 PYGO1Q9Y3Y4 419 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 UBE2D4Q9Y2X8 147 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 TRGV2A0A075B6R0 118 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 TRAV8-3A0A0A6YYJ7 113 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 LEPROTO15243 131 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 GAGE7O76087 117 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 LY6G6DO95868 133 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 GAGE12FP0CL80 117 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 GAGE12GP0CL81 117 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 GAGE12IP0CL82 117 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 Q1RN00 199 aa9.82□□□□□ -0.84
SRSF1-205ENST00000582730 ANK3Q12955 4377 aaKnown RBP9.82□□□□□ -0.84
SRSF1-205ENST00000582730 TEX49A0A1B0GTD5 131 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 GAGE4Q13068 117 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 LINC01620Q4KN68 170 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 TIMM21Q9BVV7 248 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 A0A0B4J2C4 111 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 CCDC179H3BU77 68 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 CMC4P56277 68 aaPredicted RBP9.81□□□□□ -0.84
SRSF1-205ENST00000582730 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
SRSF1-205ENST00000582730 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
SRSF1-205ENST00000582730 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
SRSF1-205ENST00000582730 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
SRSF1-205ENST00000582730 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
SRSF1-205ENST00000582730 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
SRSF1-205ENST00000582730 K7EQD1 137 aa9.8□□□□□ -0.84
SRSF1-205ENST00000582730 ATXN8Q156A1 80 aa9.8□□□□□ -0.84
SRSF1-205ENST00000582730 IFITM1P13164 125 aa9.79□□□□□ -0.84
SRSF1-205ENST00000582730 NDUFA7O95182 113 aa9.79□□□□□ -0.84
SRSF1-205ENST00000582730 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
SRSF1-205ENST00000582730 IL17DQ8TAD2 202 aa9.79□□□□□ -0.84
SRSF1-205ENST00000582730 KRTAP10-3P60369 221 aa9.78□□□□□ -0.84
SRSF1-205ENST00000582730 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
SRSF1-205ENST00000582730 TRAV8-4A0A0B4J246 113 aa9.78□□□□□ -0.84
SRSF1-205ENST00000582730 A8MZ25 164 aa9.78□□□□□ -0.84
SRSF1-205ENST00000582730 C19orf73Q9NVV2 129 aa9.78□□□□□ -0.84
SRSF1-205ENST00000582730 INAFM1C9JVW0 142 aa9.78□□□□□ -0.84
SRSF1-205ENST00000582730 C15orf53Q8NAA6 179 aa9.78□□□□□ -0.84
SRSF1-205ENST00000582730 C16orf74Q96GX8 76 aa9.78□□□□□ -0.84
SRSF1-205ENST00000582730 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.77□□□□□ -0.85
SRSF1-205ENST00000582730 TRBV10-2A0A0K0K1G8 114 aa9.77□□□□□ -0.85
SRSF1-205ENST00000582730 TRIAP1O43715 76 aa9.77□□□□□ -0.85
SRSF1-205ENST00000582730 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
SRSF1-205ENST00000582730 SHISA2Q6UWI4 295 aa9.76□□□□□ -0.85
SRSF1-205ENST00000582730 LINC00694P0DN24 101 aa9.76□□□□□ -0.85
SRSF1-205ENST00000582730 Q6Q795 121 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms