RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 HIST1H2BAQ96A08 127 aa4.54□□□□□ -1.68
CDK5RAP3-221ENST00000581662 ZFP30Q9Y2G7 519 aa4.54□□□□□ -1.68
CDK5RAP3-221ENST00000581662 MAP1LC3B2A6NCE7 125 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 C19orf71A6NCJ1 209 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 TMEM262E9PQX1 116 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 K7EQM0 130 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 PET100P0DJ07 73 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 CEBPGP53567 150 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 HIGD2BQ4VC39 106 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 LINC00526Q96FQ7 95 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 C12orf57Q99622 126 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 ACTR3CQ9C0K3 210 aaPredicted RBP4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 MAP1LC3BQ9GZQ8 125 aa4.53□□□□□ -1.68
CDK5RAP3-221ENST00000581662 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RAB19A4D1S5 217 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 H0Y8G0 127 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RAB5CP51148 216 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 STPG4Q8N801 248 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FAM104AQ969W3 186 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 PGLYRP4Q96LB8 373 aa4.52□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TRBV25-1A0A075B6N4 114 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IGHV1-24A0A0C4DH33 117 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 SSNA1O43805 119 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 PAGE4O60829 102 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NDUFS6O75380 124 aaKnown RBP4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NKX2-5P52952 324 aaPredicted RBP4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 ASB16-AS1Q495Z4 193 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 C11orf52Q96A22 123 aa4.51□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TRAV8-4A0A0B4J246 113 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IFNA7P01567 189 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 P01737 135 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MBP02144 154 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CCL20P78556 96 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IFITM2Q01629 132 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 SMIM15Q7Z3B0 74 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MBD3L1Q8WWY6 194 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CNFNQ9BYD5 112 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 BIN3Q9NQY0 253 aa4.5□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TSPAN13O95857 204 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 GIPP09681 153 aaPredicted RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CTRLP40313 264 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 AKR1C3P42330 323 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPS10P46783 165 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FOXA3P55318 350 aaPredicted RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPL39LQ96EH5 51 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 AP1S3Q96PC3 154 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TMEM243Q9BU79 118 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MED28Q9H204 178 aa4.49□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TRAV1-1A0A0B4J248 108 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 XKRY2A2RUG3 117 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 LINC00862A6NCI5 91 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 SMLR1H3BR10 107 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NTF3P20783 257 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 UBE2G1P62253 170 aa4.48□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 IGKV2-29A2NJV5 120 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MGPP08493 103 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 LINC00614P0C842 121 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 ESDP10768 282 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RPL35P42766 123 aaKnown RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 DEFA1P59665 94 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 PKIAP61925 76 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 MEF2BQ02080 365 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 TMEM97Q5BJF2 176 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 RASL11AQ6T310 242 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 NKX6-2Q9C056 277 aaPredicted RBP4.47□□□□□ -1.69
CDK5RAP3-221ENST00000581662 FXYD6-FXYD2A0A087WZ82 144 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 A0A1B0GV50 99 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 H0Y9J4 135 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 K7EN84 100 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 TSHBP01222 138 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 CENPWQ5EE01 88 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 SPANXN1Q5VSR9 72 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 LYZL1Q6UWQ5 148 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 BAGE2Q86Y30 109 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 DIRC1Q969H9 104 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 RNASE7Q9H1E1 156 aaKnown RBP4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 NIT2Q9NQR4 276 aa4.46□□□□□ -1.7
CDK5RAP3-221ENST00000581662 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 LINC00587B1AMM8 73 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 BCL2P10415 239 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 MT3P25713 68 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 AKR1D1P51857 326 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 CST9LP1Q5W188 147 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 KCNIP4Q6PIL6 250 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
CDK5RAP3-221ENST00000581662 RETNLBQ9BQ08 111 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms