RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 UBE2D4Q9Y2X8 147 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 CSDC2Q9Y534 153 aaKnown RBP4.19□□□□□ -1.74
PTPRM-212ENST00000580838 ATMQ13315 3056 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 DCHS2Q6V1P9 2916 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 IGHV3-64A0A075B6Q5 118 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 TGFAP01135 160 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 IGHV4-59P01825 116 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 GNLYP22749 145 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 NDUFV3P56181 108 aaKnown RBP4.18□□□□□ -1.74
PTPRM-212ENST00000580838 DEFB131AP59861 70 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 DAZ2Q13117 558 aaKnown RBP4.18□□□□□ -1.74
PTPRM-212ENST00000580838 DAZ4Q86SG3 579 aaKnown RBP4.18□□□□□ -1.74
PTPRM-212ENST00000580838 TMEM101Q96IK0 257 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 LINC01587Q99440 93 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 OPRPNQ99935 248 aaPredicted RBP4.18□□□□□ -1.74
PTPRM-212ENST00000580838 CHCHD7Q9BUK0 85 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 IMUPQ9GZP8 106 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 DAZ3Q9NR90 486 aaKnown RBP4.18□□□□□ -1.74
PTPRM-212ENST00000580838 SPTBN2O15020 2390 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 ZFHX4Q86UP3 3567 aa4.18□□□□□ -1.74
PTPRM-212ENST00000580838 SPENQ96T58 3664 aaKnown RBP4.17□□□□□ -1.74
PTPRM-212ENST00000580838 TRAV4A0A0B4J268 109 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 IGLV5-39A0A0G2JS06 123 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE12JA6NER3 117 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 H7C423 109 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 COX7A2LO14548 114 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE7O76087 117 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 TRACP01848 142 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 ATP5G1P05496 136 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE12FP0CL80 117 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE12GP0CL81 117 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE12IP0CL82 117 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 INAFM2P0DMQ5 153 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 MALP21145 153 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 RPL36AP83881 106 aaKnown RBP4.17□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE4Q13068 117 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 FHL3Q13643 280 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 LY6DQ14210 128 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 FAM222AQ5U5X8 452 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 TMEM86BQ8N661 226 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 C4orf3Q8WVX3 66 aa4.17□□□□□ -1.74
PTPRM-212ENST00000580838 BEX4Q9NWD9 120 aaPredicted RBP4.17□□□□□ -1.74
PTPRM-212ENST00000580838 TRAV13-2A0A0B4J235 113 aa4.16□□□□□ -1.74
PTPRM-212ENST00000580838 TRBV7-7A0A0K0K1E9 115 aa4.16□□□□□ -1.74
PTPRM-212ENST00000580838 KNCNA6PVL3 124 aa4.16□□□□□ -1.74
PTPRM-212ENST00000580838 TMEM95Q3KNT9 176 aa4.16□□□□□ -1.74
PTPRM-212ENST00000580838 Q8N2B8 174 aa4.16□□□□□ -1.74
PTPRM-212ENST00000580838 ZNF702PQ9H963 129 aa4.16□□□□□ -1.74
PTPRM-212ENST00000580838 SPTBN1Q01082 2364 aaKnown RBP4.16□□□□□ -1.74
PTPRM-212ENST00000580838 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
PTPRM-212ENST00000580838 TRAV8-3A0A0A6YYJ7 113 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 TEX49A0A1B0GTD5 131 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
PTPRM-212ENST00000580838 UBE2L6O14933 153 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 EDN2P20800 178 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 MEIG1Q5JSS6 88 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 DAND5Q8N907 189 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 LINC00308Q8TCZ7 52 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 MAP6D1Q9H9H5 199 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 MUC3AQ02505 3323 aa4.15□□□□□ -1.75
PTPRM-212ENST00000580838 IGHV3-73A0A0B4J1V6 119 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 CYSRT1A8MQ03 144 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 K7EQD1 137 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 RBMY1A1P0DJD3 496 aaKnown RBP4.14□□□□□ -1.75
PTPRM-212ENST00000580838 RBMY1CP0DJD4 496 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 HTN1P15515 57 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 RBMY1FQ15415 496 aaKnown RBP4.14□□□□□ -1.75
PTPRM-212ENST00000580838 ADAMTSL4-AS1Q5T5F5 129 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 LINC00643Q86TS7 51 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 STHQ8IWL8 128 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 C11orf72Q8NBR9 251 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 DEFB104AQ8WTQ1 72 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 FAM104AQ969W3 186 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 TMEM243Q9BU79 118 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 C1orf43Q9BWL3 253 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 TMEM126AQ9H061 195 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 Q9H8V8 135 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 CDKN2A-AS1Q9UH64 79 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 BSNQ9UPA5 3926 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 HIVEP3Q5T1R4 2406 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 ABCA2Q9BZC7 2435 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 IGF2RP11717 2491 aa4.14□□□□□ -1.75
PTPRM-212ENST00000580838 IGHV3OR16-12A0A075B7B8 117 aa4.13□□□□□ -1.75
PTPRM-212ENST00000580838 RBMY1BA6NDE4 496 aaKnown RBP4.13□□□□□ -1.75
PTPRM-212ENST00000580838 RBMY1EA6NEQ0 496 aaKnown RBP4.13□□□□□ -1.75
PTPRM-212ENST00000580838 H0YGX0 51 aa4.13□□□□□ -1.75
PTPRM-212ENST00000580838 CRPP02741 224 aa4.13□□□□□ -1.75
PTPRM-212ENST00000580838 RBMY1DP0C7P1 496 aaKnown RBP4.13□□□□□ -1.75
PTPRM-212ENST00000580838 CXCL5P42830 114 aa4.13□□□□□ -1.75
PTPRM-212ENST00000580838 DEFB114Q30KQ6 69 aa4.13□□□□□ -1.75
PTPRM-212ENST00000580838 LINC00242Q5T6M2 205 aa4.13□□□□□ -1.75
PTPRM-212ENST00000580838 LRRC75A-AS1Q8N1F1 130 aa4.13□□□□□ -1.75
PTPRM-212ENST00000580838 SMG1Q96Q15 3661 aaKnown RBP4.13□□□□□ -1.75
PTPRM-212ENST00000580838 COL6A6A6NMZ7 2263 aa4.12□□□□□ -1.75
PTPRM-212ENST00000580838 A0A096LNT2 108 aa4.12□□□□□ -1.75
PTPRM-212ENST00000580838 TRGV1A0A0A0MS02 117 aa4.12□□□□□ -1.75
PTPRM-212ENST00000580838 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
PTPRM-212ENST00000580838 DNAL4O96015 105 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms