RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 COA6Q5JTJ3 125 aaKnown RBP4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.87□□□□□ -1.63
RNF43-204ENST00000580014 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BHQ93079 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 KIR2DL4Q99706 377 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BNQ99877 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BMQ99879 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 IGHV1-24A0A0C4DH33 117 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 CCL18P55774 89 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 RAB5BP61020 215 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 LGALS9CQ6DKI2 356 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 MRPL52Q86TS9 123 aaKnown RBP4.86□□□□□ -1.63
RNF43-204ENST00000580014 NIT1Q86X76 327 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 C20orf203Q8NBC4 194 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 TIMM21Q9BVV7 248 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
RNF43-204ENST00000580014 TRBV25-1A0A075B6N4 114 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 LOC389332A0A1B0GUA5 103 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 A0A1B0GUV1 79 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 C1orf196B1AJZ1 125 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 LINC00614P0C842 121 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 DNAH10OSP0CZ25 163 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 PKIAP61925 76 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 LAGE3Q14657 143 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 ORMDL2Q53FV1 153 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
RNF43-204ENST00000580014 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
RNF43-204ENST00000580014 CSDC2Q9Y534 153 aaKnown RBP4.85□□□□□ -1.63
RNF43-204ENST00000580014 A0A096LNJ9 63 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 TRAV8-6A0A0B4J262 113 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 LINC01549A6NIU2 74 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 K7EP13 123 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 G0S2P27469 103 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 FCER1GP30273 86 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.63
RNF43-204ENST00000580014 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 FA2HQ7L5A8 372 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 WFDC10BQ8IUB3 73 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 FAM104AQ969W3 186 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 PYGO1Q9Y3Y4 419 aa4.84□□□□□ -1.63
RNF43-204ENST00000580014 NUPR1O60356 82 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 SERF1AO75920 110 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
RNF43-204ENST00000580014 PDZD11Q5EBL8 140 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 BAGE3Q86Y29 109 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 DEFB104AQ8WTQ1 72 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 TOMM6Q96B49 74 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 Q9H8V8 135 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 CSMD3Q7Z407 3707 aa4.83□□□□□ -1.64
RNF43-204ENST00000580014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.82□□□□□ -1.64
RNF43-204ENST00000580014 hDV102S1A0JD36 115 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 IGKV2-29A2NJV5 120 aaPredicted RBP4.82□□□□□ -1.64
RNF43-204ENST00000580014 IGIPA6NJ69 53 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 SIVA1O15304 175 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 FGF6P10767 208 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 VPREB1P12018 145 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 RBX1P62877 108 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 MRPS36P82909 103 aaKnown RBP4.82□□□□□ -1.64
RNF43-204ENST00000580014 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 PRR26Q8N8Z3 221 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 PACRGQ96M98 296 aaPredicted RBP4.82□□□□□ -1.64
RNF43-204ENST00000580014 CHCHD5Q9BSY4 110 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 CYSLTR1Q9Y271 337 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 UBE2D4Q9Y2X8 147 aa4.82□□□□□ -1.64
RNF43-204ENST00000580014 RPL39P62891 51 aaKnown RBP4.81□□□□□ -1.64
RNF43-204ENST00000580014 SMAGPQ0VAQ4 97 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 GAGE6Q13070 117 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 MPV17L2Q567V2 206 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 RNASEKQ6P5S7 137 aaKnown RBP4.81□□□□□ -1.64
RNF43-204ENST00000580014 Q6ZR54 194 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 ERASQ7Z444 233 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 CDC42SE2Q9NRR3 84 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 PRR34Q9NV39 138 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
RNF43-204ENST00000580014 IGLV4-60A0A075B6I1 120 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 LCE6AA0A183 80 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 IBA57-AS1B1ANH7 110 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 HSBP1O75506 76 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 HBDP02042 147 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 NDUFA6P56556 154 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 UBE2DNLQ8IWF7 75 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 C10orf126Q8N4M7 172 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 AMELXQ99217 191 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 KRTAP1-5Q9BYS1 174 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 VPS13DQ5THJ4 4388 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 STARD9Q9P2P6 4700 aa4.8□□□□□ -1.64
RNF43-204ENST00000580014 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 IGLV4-3A0A075B6K6 122 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 TRAV9-2A0A087WT02 112 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 A0A087WX48 190 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 NBDYA0A0U1RRE5 68 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 C5orf52A6NGY3 159 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 TMEM262E9PQX1 116 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 UBE2L6O14933 153 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms