RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 SBSPONQ8IVN8 264 aa6.33□□□□□ -1.4
PPP4R1-213ENST00000579609 WFDC9Q8NEX5 89 aa6.33□□□□□ -1.4
PPP4R1-213ENST00000579609 FAM104AQ969W3 186 aa6.33□□□□□ -1.4
PPP4R1-213ENST00000579609 SONP18583 2426 aaKnown RBP6.33□□□□□ -1.4
PPP4R1-213ENST00000579609 IGHV3-73A0A0B4J1V6 119 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 LYRM9A8MSI8 78 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 APOC4P55056 127 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 KRTAP10-3P60369 221 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 C12orf74Q32Q52 190 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 ZNF479Q96JC4 524 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 TTTY13Q9BZ97 58 aa6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 NHP2Q9NX24 153 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-213ENST00000579609 NIPBLQ6KC79 2804 aaeCLIP6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 TRGV2A0A075B6R0 118 aa6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 IGHV3OR16-12A0A075B7B8 117 aa6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 INAFM1C9JVW0 142 aa6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 H3BUT2 72 aa6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 RPL24P83731 157 aaKnown RBP6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 SRSF9Q13242 221 aaKnown RBP eCLIP6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 COPS9Q8WXC6 57 aa6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 NOP10Q9NPE3 64 aaKnown RBP6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 MAP1AP78559 2803 aaPredicted RBP6.31□□□□□ -1.4
PPP4R1-213ENST00000579609 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 IGLL5B9A064 214 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 IFITM1P13164 125 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 TCTAP57738 103 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 ZFAND6Q6FIF0 208 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 TMEM101Q96IK0 257 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 VSIG2Q96IQ7 327 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 SMR3AQ99954 134 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 TMEM243Q9BU79 118 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 GEMIN7Q9H840 131 aaKnown RBP6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 SPANXCQ9NY87 97 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 SPCS1Q9Y6A9 102 aa6.3□□□□□ -1.4
PPP4R1-213ENST00000579609 A0A0B4J2C4 111 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 TRGV4A0A0C4DH28 118 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 IGLV5-39A0A0G2JS06 123 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 TEX48A0A1B0GUV7 120 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 IGHV3-30P01768 117 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 IGHV3-30-3P0DP02 117 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 IGHV3-30-5P0DP03 117 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 Q6ZUT4 128 aa6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 ANK3Q12955 4377 aaKnown RBP6.29□□□□□ -1.4
PPP4R1-213ENST00000579609 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 F8W1H4 67 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 K7ERU9 68 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 UBE2L6O14933 153 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 PRM2P04554 102 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 TSPEAR-AS2P59090 65 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 FHL2Q14192 279 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 OPRPNQ99935 248 aaPredicted RBP6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
PPP4R1-213ENST00000579609 ACANP16112 2415 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 TRBV20-1A0A075B6N2 111 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 TRAV26-1A0A087WT03 109 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 TRBV6-8A0A0A6YYG3 113 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 NDUFA1O15239 70 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE7O76087 117 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE12FP0CL80 117 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE12GP0CL81 117 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE12IP0CL82 117 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 MIFP14174 115 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 EMP1P54849 157 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 HERV-K104P63124 156 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 PRO0255Q9UI72 69 aa6.27□□□□□ -1.41
PPP4R1-213ENST00000579609 WNK1Q9H4A3 2382 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 CIRBPQ14011 172 aaKnown RBP6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 KRTAP21-3Q3LHN1 58 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 LINC00242Q5T6M2 205 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 HIST2H2BDQ6DRA6 164 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 WFDC10AQ9H1F0 79 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 NDUFA12Q9UI09 145 aa6.26□□□□□ -1.41
PPP4R1-213ENST00000579609 ZNF469Q96JG9 3925 aaPredicted RBP6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 FBN3Q75N90 2809 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 IGHV3-38A0A0C4DH36 116 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE12JA6NER3 117 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 A8MZ25 164 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 M0QXV9 152 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE4Q13068 117 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE5Q13069 117 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 MIAQ16674 131 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 Q9UF83 564 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 PRO1854Q9UHT4 67 aa6.25□□□□□ -1.41
PPP4R1-213ENST00000579609 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms