RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 AKR1D1P51857 326 aa9.24□□□□□ -0.93
SRSF1-202ENST00000578430 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
SRSF1-202ENST00000578430 IGLV4-3A0A075B6K6 122 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 LOC100996750A0A140TA64 210 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 C20orf202A1L168 122 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 CCL18P55774 89 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 GAGE6Q13070 117 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 ESRGQ1W209 222 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 OR5A1Q8NGJ0 315 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
SRSF1-202ENST00000578430 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
SRSF1-202ENST00000578430 PMVKQ15126 192 aa9.22□□□□□ -0.93
SRSF1-202ENST00000578430 LGALS9CQ6DKI2 356 aa9.22□□□□□ -0.93
SRSF1-202ENST00000578430 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
SRSF1-202ENST00000578430 VCX2Q9H322 139 aa9.22□□□□□ -0.93
SRSF1-202ENST00000578430 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
SRSF1-202ENST00000578430 DYNC2H1Q8NCM8 4307 aaKnown RBP9.22□□□□□ -0.93
SRSF1-202ENST00000578430 TMEM262E9PQX1 116 aa9.21□□□□□ -0.94
SRSF1-202ENST00000578430 TEX43Q6ZNM6 134 aa9.21□□□□□ -0.94
SRSF1-202ENST00000578430 AMELXQ99217 191 aa9.21□□□□□ -0.94
SRSF1-202ENST00000578430 CDC42SE2Q9NRR3 84 aa9.21□□□□□ -0.94
SRSF1-202ENST00000578430 APLNQ9ULZ1 77 aa9.21□□□□□ -0.94
SRSF1-202ENST00000578430 MRPS16Q9Y3D3 137 aaKnown RBP9.21□□□□□ -0.94
SRSF1-202ENST00000578430 DNAH7Q8WXX0 4024 aa9.21□□□□□ -0.94
SRSF1-202ENST00000578430 A0A087WX48 190 aa9.2□□□□□ -0.94
SRSF1-202ENST00000578430 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SRSF1-202ENST00000578430 ZNF664Q8N3J9 261 aa9.2□□□□□ -0.94
SRSF1-202ENST00000578430 MUC7Q8TAX7 377 aa9.2□□□□□ -0.94
SRSF1-202ENST00000578430 C2orf88Q9BSF0 95 aa9.2□□□□□ -0.94
SRSF1-202ENST00000578430 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
SRSF1-202ENST00000578430 RBX1P62877 108 aa9.19□□□□□ -0.94
SRSF1-202ENST00000578430 Q6ZUT4 128 aa9.19□□□□□ -0.94
SRSF1-202ENST00000578430 FAM104AQ969W3 186 aa9.19□□□□□ -0.94
SRSF1-202ENST00000578430 UPK3BQ9BT76 320 aa9.19□□□□□ -0.94
SRSF1-202ENST00000578430 CST9LQ9H4G1 147 aa9.19□□□□□ -0.94
SRSF1-202ENST00000578430 H0Y8G0 127 aa9.18□□□□□ -0.94
SRSF1-202ENST00000578430 SCGB1D1O95968 90 aa9.18□□□□□ -0.94
SRSF1-202ENST00000578430 ODF1Q14990 250 aa9.18□□□□□ -0.94
SRSF1-202ENST00000578430 MPV17L2Q567V2 206 aa9.18□□□□□ -0.94
SRSF1-202ENST00000578430 OPRPNQ99935 248 aaPredicted RBP9.18□□□□□ -0.94
SRSF1-202ENST00000578430 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
SRSF1-202ENST00000578430 SACSQ9NZJ4 4579 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 RYR2Q92736 4967 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 IGLV4-60A0A075B6I1 120 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 F8VRH5 84 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 SMIM6P0DI80 62 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 LINC01556Q5JQF7 62 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 Q8N976 141 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
SRSF1-202ENST00000578430 CCL25O15444 150 aa9.16□□□□□ -0.94
SRSF1-202ENST00000578430 PLNP26678 52 aa9.16□□□□□ -0.94
SRSF1-202ENST00000578430 SEC11AP67812 179 aa9.16□□□□□ -0.94
SRSF1-202ENST00000578430 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
SRSF1-202ENST00000578430 DPM2O94777 84 aa9.15□□□□□ -0.94
SRSF1-202ENST00000578430 DNAH10OSP0CZ25 163 aa9.15□□□□□ -0.94
SRSF1-202ENST00000578430 MRPL35Q9NZE8 188 aaKnown RBP9.15□□□□□ -0.94
SRSF1-202ENST00000578430 K7EP13 123 aa9.14□□□□□ -0.95
SRSF1-202ENST00000578430 SIVA1O15304 175 aa9.14□□□□□ -0.95
SRSF1-202ENST00000578430 IGKCP01834 107 aa9.14□□□□□ -0.95
SRSF1-202ENST00000578430 ANGP03950 147 aaKnown RBP9.14□□□□□ -0.95
SRSF1-202ENST00000578430 UBE2D1P51668 147 aa9.14□□□□□ -0.95
SRSF1-202ENST00000578430 ZFAND6Q6FIF0 208 aa9.14□□□□□ -0.95
SRSF1-202ENST00000578430 FAM19A3Q7Z5A8 133 aa9.14□□□□□ -0.95
SRSF1-202ENST00000578430 NFE4Q86UQ8 179 aa9.14□□□□□ -0.95
SRSF1-202ENST00000578430 C3orf84H3BNL1 204 aa9.13□□□□□ -0.95
SRSF1-202ENST00000578430 IGLC3P0DOY3 106 aa9.13□□□□□ -0.95
SRSF1-202ENST00000578430 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
SRSF1-202ENST00000578430 ZC2HC1BQ5TFG8 222 aa9.13□□□□□ -0.95
SRSF1-202ENST00000578430 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
SRSF1-202ENST00000578430 EPPK1P58107 5090 aaKnown RBP9.12□□□□□ -0.95
SRSF1-202ENST00000578430 IGLV4-69A0A075B6H9 119 aa9.12□□□□□ -0.95
SRSF1-202ENST00000578430 TINCRA0A1B0GVN0 87 aa9.12□□□□□ -0.95
SRSF1-202ENST00000578430 LINC00269Q8N2A0 174 aa9.12□□□□□ -0.95
SRSF1-202ENST00000578430 LYSTQ99698 3801 aa9.12□□□□□ -0.95
SRSF1-202ENST00000578430 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
SRSF1-202ENST00000578430 PRR34Q9NV39 138 aa9.12□□□□□ -0.95
SRSF1-202ENST00000578430 TRAV9-2A0A087WT02 112 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 TRAV13-1A0A0B4J241 112 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 A0A0J9YXV3 536 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 IGHV3-30P01768 117 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 IGHV3-33P01772 117 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 IGHV3-30-3P0DP02 117 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 IGHV3-30-5P0DP03 117 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 HERVK_113P63121 156 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 REG3AQ06141 175 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 SS18Q15532 418 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 KLK12Q9UKR0 248 aa9.11□□□□□ -0.95
SRSF1-202ENST00000578430 TENM2Q9NT68 2774 aa9.1□□□□□ -0.95
SRSF1-202ENST00000578430 CHAC1Q9BUX1 264 aa9.1□□□□□ -0.95
SRSF1-202ENST00000578430 GEMIN7Q9H840 131 aaKnown RBP9.1□□□□□ -0.95
SRSF1-202ENST00000578430 Q9H8V8 135 aa9.1□□□□□ -0.95
SRSF1-202ENST00000578430 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
SRSF1-202ENST00000578430 PLECQ15149 4684 aaKnown RBP9.1□□□□□ -0.95
SRSF1-202ENST00000578430 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms