RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 F8W1H4 67 aa12.58□□□□□ -0.4
ERBB2-205ENST00000578199 EIF4EBP3O60516 100 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE13Q4V321 117 aa12.58□□□□□ -0.4
ERBB2-205ENST00000578199 MUSTN1Q8IVN3 82 aa12.58□□□□□ -0.4
ERBB2-205ENST00000578199 SPANXA1Q9NS26 97 aa12.58□□□□□ -0.4
ERBB2-205ENST00000578199 GCN1Q92616 2671 aaKnown RBP12.58□□□□□ -0.4
ERBB2-205ENST00000578199 A0A0J9YXY3 114 aa12.58□□□□□ -0.4
ERBB2-205ENST00000578199 LINC00694P0DN24 101 aa12.58□□□□□ -0.4
ERBB2-205ENST00000578199 ETDBQ3ZM63 59 aa12.58□□□□□ -0.4
ERBB2-205ENST00000578199 PSMB2P49721 201 aa12.57□□□□□ -0.4
ERBB2-205ENST00000578199 NDUFA7O95182 113 aa12.57□□□□□ -0.4
ERBB2-205ENST00000578199 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
ERBB2-205ENST00000578199 PRO0461Q9UI25 63 aa12.57□□□□□ -0.4
ERBB2-205ENST00000578199 HECTD1Q9ULT8 2610 aa12.56□□□□□ -0.4
ERBB2-205ENST00000578199 TINCRA0A1B0GVN0 87 aa12.56□□□□□ -0.4
ERBB2-205ENST00000578199 IGLV1-51P01701 117 aa12.56□□□□□ -0.4
ERBB2-205ENST00000578199 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-205ENST00000578199 IGHV1-58A0A0C4DH39 117 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE12JA6NER3 117 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE4Q13068 117 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE5Q13069 117 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 DGAT2L7PQ6IED9 249 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 C19orf73Q9NVV2 129 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 H7C2G1 150 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 NTM-AS1Q6ZSK4 140 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 CDKN2A-AS1Q9UH64 79 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 HIVEP2P31629 2446 aa12.55□□□□□ -0.4
ERBB2-205ENST00000578199 VWFP04275 2813 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 J3QR89 54 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 COX6A2Q02221 97 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 ADAMTSL4-AS1Q5T5F5 129 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 ZNF418Q8TF45 676 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-205ENST00000578199 K7EQD1 137 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE7O76087 117 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 HILS1P60008 231 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 NPC2P61916 151 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 VSIG2Q96IQ7 327 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 GEMIN7Q9H840 131 aaKnown RBP12.54□□□□□ -0.4
ERBB2-205ENST00000578199 PRO1854Q9UHT4 67 aa12.54□□□□□ -0.4
ERBB2-205ENST00000578199 PLAC8L1A1L4L8 177 aa12.53□□□□□ -0.4
ERBB2-205ENST00000578199 UBE2D3P61077 147 aa12.53□□□□□ -0.4
ERBB2-205ENST00000578199 UBE2D2P62837 147 aa12.53□□□□□ -0.4
ERBB2-205ENST00000578199 PRSS2P07478 247 aa12.53□□□□□ -0.4
ERBB2-205ENST00000578199 KRTAP10-3P60369 221 aa12.53□□□□□ -0.4
ERBB2-205ENST00000578199 NDUFA12Q9UI09 145 aa12.53□□□□□ -0.4
ERBB2-205ENST00000578199 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
ERBB2-205ENST00000578199 LOC100131303A0A0U1RQF7 123 aa12.52□□□□□ -0.4
ERBB2-205ENST00000578199 RPL36AP83881 106 aaKnown RBP12.52□□□□□ -0.4
ERBB2-205ENST00000578199 RPL36ALQ969Q0 106 aaKnown RBP12.52□□□□□ -0.4
ERBB2-205ENST00000578199 LITAFQ99732 161 aa12.52□□□□□ -0.4
ERBB2-205ENST00000578199 INSL3P51460 131 aa12.52□□□□□ -0.41
ERBB2-205ENST00000578199 CFAP161Q6P656 301 aa12.52□□□□□ -0.41
ERBB2-205ENST00000578199 NBEAL2Q6ZNJ1 2754 aa12.52□□□□□ -0.41
ERBB2-205ENST00000578199 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
ERBB2-205ENST00000578199 TCL1BO95988 128 aa12.51□□□□□ -0.41
ERBB2-205ENST00000578199 SMCPP49901 116 aaPredicted RBP12.51□□□□□ -0.41
ERBB2-205ENST00000578199 TRGV2A0A075B6R0 118 aa12.51□□□□□ -0.41
ERBB2-205ENST00000578199 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
ERBB2-205ENST00000578199 OTOGQ6ZRI0 2925 aa12.5□□□□□ -0.41
ERBB2-205ENST00000578199 CSNK1G2-AS1Q8NCQ2 148 aa12.5□□□□□ -0.41
ERBB2-205ENST00000578199 SCGB1C2P0DMR2 95 aa12.49□□□□□ -0.41
ERBB2-205ENST00000578199 TRAV13-1A0A0B4J241 112 aa12.49□□□□□ -0.41
ERBB2-205ENST00000578199 DAND5Q8N907 189 aa12.49□□□□□ -0.41
ERBB2-205ENST00000578199 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
ERBB2-205ENST00000578199 TMEM101Q96IK0 257 aa12.48□□□□□ -0.41
ERBB2-205ENST00000578199 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
ERBB2-205ENST00000578199 LINC00242Q5T6M2 205 aa12.48□□□□□ -0.41
ERBB2-205ENST00000578199 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
ERBB2-205ENST00000578199 TRBV10-1A0A0K0K1A3 114 aa12.47□□□□□ -0.41
ERBB2-205ENST00000578199 CMC4P56277 68 aaPredicted RBP12.47□□□□□ -0.41
ERBB2-205ENST00000578199 DAZ4Q86SG3 579 aaKnown RBP12.47□□□□□ -0.41
ERBB2-205ENST00000578199 DAZ3Q9NR90 486 aaKnown RBP12.47□□□□□ -0.41
ERBB2-205ENST00000578199 ZNF625Q96I27 306 aaPredicted RBP12.46□□□□□ -0.41
ERBB2-205ENST00000578199 ERG28Q9UKR5 140 aa12.46□□□□□ -0.42
ERBB2-205ENST00000578199 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
ERBB2-205ENST00000578199 SPATA3Q8NHX4 192 aa12.45□□□□□ -0.42
ERBB2-205ENST00000578199 A0A0U1RRA0 63 aa12.45□□□□□ -0.42
ERBB2-205ENST00000578199 LY6G6DO95868 133 aa12.45□□□□□ -0.42
ERBB2-205ENST00000578199 TIRAPP58753 221 aa12.45□□□□□ -0.42
ERBB2-205ENST00000578199 A0A0B4J2C4 111 aa12.44□□□□□ -0.42
ERBB2-205ENST00000578199 Q1RN00 199 aa12.44□□□□□ -0.42
ERBB2-205ENST00000578199 SBSPONQ8IVN8 264 aa12.44□□□□□ -0.42
ERBB2-205ENST00000578199 TENM1Q9UKZ4 2725 aa12.44□□□□□ -0.42
ERBB2-205ENST00000578199 IGLV5-45A0A087WSX0 123 aa12.44□□□□□ -0.42
ERBB2-205ENST00000578199 PF4P02776 101 aa12.44□□□□□ -0.42
ERBB2-205ENST00000578199 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
ERBB2-205ENST00000578199 TRGV4A0A0C4DH28 118 aa12.43□□□□□ -0.42
ERBB2-205ENST00000578199 FAM110AQ9BQ89 295 aa12.43□□□□□ -0.42
ERBB2-205ENST00000578199 C1QTNF4Q9BXJ3 329 aa12.43□□□□□ -0.42
ERBB2-205ENST00000578199 MIAQ16674 131 aa12.42□□□□□ -0.42
ERBB2-205ENST00000578199 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-205ENST00000578199 HERVK_113P63121 156 aa12.42□□□□□ -0.42
ERBB2-205ENST00000578199 LYRM7Q5U5X0 104 aa12.42□□□□□ -0.42
ERBB2-205ENST00000578199 SPANXDQ9BXN6 97 aa12.42□□□□□ -0.42
ERBB2-205ENST00000578199 SPANXCQ9NY87 97 aa12.42□□□□□ -0.42
ERBB2-205ENST00000578199 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
ERBB2-205ENST00000578199 Q9H8V8 135 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms