RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 TAX1BP3O14907 124 aa19.52■□□□□ 0.72
LIMD2-203ENST00000578067 CSDC2Q9Y534 153 aaKnown RBP19.52■□□□□ 0.72
LIMD2-203ENST00000578067 A6NDN8 102 aa19.52■□□□□ 0.72
LIMD2-203ENST00000578067 SMAGPQ0VAQ4 97 aa19.51■□□□□ 0.71
LIMD2-203ENST00000578067 TAL2Q16559 108 aa19.51■□□□□ 0.71
LIMD2-203ENST00000578067 BAHCC1Q9P281 2608 aa19.51■□□□□ 0.71
LIMD2-203ENST00000578067 TINCRA0A1B0GVN0 87 aa19.51■□□□□ 0.71
LIMD2-203ENST00000578067 GCSHP23434 173 aa19.51■□□□□ 0.71
LIMD2-203ENST00000578067 RNF183Q96D59 192 aa19.51■□□□□ 0.71
LIMD2-203ENST00000578067 TMEM243Q9BU79 118 aa19.51■□□□□ 0.71
LIMD2-203ENST00000578067 MIFP14174 115 aa19.5■□□□□ 0.71
LIMD2-203ENST00000578067 LEPROTO15243 131 aa19.49■□□□□ 0.71
LIMD2-203ENST00000578067 DEFB4AO15263 64 aa19.49■□□□□ 0.71
LIMD2-203ENST00000578067 TSPEAR-AS2P59090 65 aa19.49■□□□□ 0.71
LIMD2-203ENST00000578067 J3QQQ9 107 aa19.49■□□□□ 0.71
LIMD2-203ENST00000578067 KRTAP10-11P60412 298 aa19.49■□□□□ 0.71
LIMD2-203ENST00000578067 UBE2D1P51668 147 aa19.48■□□□□ 0.71
LIMD2-203ENST00000578067 CEND1Q8N111 149 aa19.48■□□□□ 0.71
LIMD2-203ENST00000578067 Q8NAQ8 132 aa19.48■□□□□ 0.71
LIMD2-203ENST00000578067 TRRAPQ9Y4A5 3859 aa19.48■□□□□ 0.71
LIMD2-203ENST00000578067 TM2D2Q9BX73 214 aa19.47■□□□□ 0.71
LIMD2-203ENST00000578067 UBE2L6O14933 153 aa19.47■□□□□ 0.71
LIMD2-203ENST00000578067 LGALS3P17931 250 aaKnown RBP19.47■□□□□ 0.71
LIMD2-203ENST00000578067 SCGB1D4Q6XE38 83 aa19.47■□□□□ 0.71
LIMD2-203ENST00000578067 H7C423 109 aa19.46■□□□□ 0.71
LIMD2-203ENST00000578067 EGFEM1PQ0D2K5 195 aa19.46■□□□□ 0.71
LIMD2-203ENST00000578067 HIST1H4GQ99525 98 aa19.46■□□□□ 0.71
LIMD2-203ENST00000578067 FXYD2P54710 66 aa19.46■□□□□ 0.71
LIMD2-203ENST00000578067 PLEKHB2Q96CS7 222 aa19.46■□□□□ 0.71
LIMD2-203ENST00000578067 PRO0255Q9UI72 69 aa19.46■□□□□ 0.71
LIMD2-203ENST00000578067 OR5A1Q8NGJ0 315 aa19.45■□□□□ 0.7
LIMD2-203ENST00000578067 FBN1P35555 2871 aaKnown RBP19.45■□□□□ 0.7
LIMD2-203ENST00000578067 AMMECR1LQ6DCA0 310 aa19.44■□□□□ 0.7
LIMD2-203ENST00000578067 GYPEP15421 78 aa19.44■□□□□ 0.7
LIMD2-203ENST00000578067 GEMIN7Q9H840 131 aaKnown RBP19.44■□□□□ 0.7
LIMD2-203ENST00000578067 IGHV3-64A0A075B6Q5 118 aa19.43■□□□□ 0.7
LIMD2-203ENST00000578067 TRBV6-8A0A0A6YYG3 113 aa19.43■□□□□ 0.7
LIMD2-203ENST00000578067 CDC42SE2Q9NRR3 84 aa19.43■□□□□ 0.7
LIMD2-203ENST00000578067 H3BRM9 83 aa19.42■□□□□ 0.7
LIMD2-203ENST00000578067 TIRAPP58753 221 aa19.42■□□□□ 0.7
LIMD2-203ENST00000578067 TMEM101Q96IK0 257 aa19.42■□□□□ 0.7
LIMD2-203ENST00000578067 K7EP13 123 aa19.42■□□□□ 0.7
LIMD2-203ENST00000578067 PTTG1IPP53801 180 aa19.42■□□□□ 0.7
LIMD2-203ENST00000578067 DAD1P61803 113 aa19.42■□□□□ 0.7
LIMD2-203ENST00000578067 ATP6V0E2Q8NHE4 81 aa19.4■□□□□ 0.7
LIMD2-203ENST00000578067 A0A0J9YY99 117 aa19.39■□□□□ 0.69
LIMD2-203ENST00000578067 A8MZ25 164 aa19.39■□□□□ 0.69
LIMD2-203ENST00000578067 IGHV3-30-3P0DP02 117 aa19.39■□□□□ 0.69
LIMD2-203ENST00000578067 FAM19A3Q7Z5A8 133 aa19.39■□□□□ 0.69
LIMD2-203ENST00000578067 CELA1Q9UNI1 258 aa19.39■□□□□ 0.69
LIMD2-203ENST00000578067 NBEAL2Q6ZNJ1 2754 aa19.39■□□□□ 0.69
LIMD2-203ENST00000578067 IGLV5-45A0A087WSX0 123 aa19.38■□□□□ 0.69
LIMD2-203ENST00000578067 IGHV1-58A0A0C4DH39 117 aa19.38■□□□□ 0.69
LIMD2-203ENST00000578067 PAX4O43316 350 aa19.38■□□□□ 0.69
LIMD2-203ENST00000578067 SPART-AS1P0CW21 52 aa19.38■□□□□ 0.69
LIMD2-203ENST00000578067 SMIM13P0DJ93 91 aa19.37■□□□□ 0.69
LIMD2-203ENST00000578067 TRAV8-3A0A0A6YYJ7 113 aa19.37■□□□□ 0.69
LIMD2-203ENST00000578067 GAGE6Q13070 117 aa19.37■□□□□ 0.69
LIMD2-203ENST00000578067 LINC00242Q5T6M2 205 aa19.37■□□□□ 0.69
LIMD2-203ENST00000578067 HERVK_113P63121 156 aa19.36■□□□□ 0.69
LIMD2-203ENST00000578067 CHCHD5Q9BSY4 110 aa19.36■□□□□ 0.69
LIMD2-203ENST00000578067 CDKN2A-AS1Q9UH64 79 aa19.36■□□□□ 0.69
LIMD2-203ENST00000578067 VSIG2Q96IQ7 327 aa19.35■□□□□ 0.69
LIMD2-203ENST00000578067 ATP5G1P05496 136 aa19.35■□□□□ 0.69
LIMD2-203ENST00000578067 SPINK8P0C7L1 97 aa19.35■□□□□ 0.69
LIMD2-203ENST00000578067 COX6A2Q02221 97 aa19.35■□□□□ 0.69
LIMD2-203ENST00000578067 SRSF9Q13242 221 aaKnown RBP eCLIP19.35■□□□□ 0.69
LIMD2-203ENST00000578067 TRAV13-1A0A0B4J241 112 aa19.34■□□□□ 0.69
LIMD2-203ENST00000578067 C9orf118A6NHY6 69 aa19.34■□□□□ 0.69
LIMD2-203ENST00000578067 SPANXB1Q9NS25 103 aaPredicted RBP19.34■□□□□ 0.69
LIMD2-203ENST00000578067 NHP2Q9NX24 153 aaKnown RBP19.34■□□□□ 0.69
LIMD2-203ENST00000578067 VAMP3Q15836 100 aa19.33■□□□□ 0.68
LIMD2-203ENST00000578067 RAB37Q96AX2 223 aa19.33■□□□□ 0.68
LIMD2-203ENST00000578067 STAB1Q9NY15 2570 aa19.3■□□□□ 0.68
LIMD2-203ENST00000578067 G3V4G9 280 aa19.29■□□□□ 0.68
LIMD2-203ENST00000578067 K7ERJ3 54 aa19.29■□□□□ 0.68
LIMD2-203ENST00000578067 UBE2V1Q13404 147 aa19.29■□□□□ 0.68
LIMD2-203ENST00000578067 C10orf126Q8N4M7 172 aa19.29■□□□□ 0.68
LIMD2-203ENST00000578067 IGLV4-60A0A075B6I1 120 aa19.28■□□□□ 0.68
LIMD2-203ENST00000578067 TEX48A0A1B0GUV7 120 aa19.28■□□□□ 0.68
LIMD2-203ENST00000578067 A0A096LPF7 62 aa19.27■□□□□ 0.68
LIMD2-203ENST00000578067 F5H768 121 aa19.27■□□□□ 0.68
LIMD2-203ENST00000578067 C12orf74Q32Q52 190 aa19.27■□□□□ 0.68
LIMD2-203ENST00000578067 H3BUT2 72 aa19.27■□□□□ 0.67
LIMD2-203ENST00000578067 NDUFA12Q9UI09 145 aa19.26■□□□□ 0.67
LIMD2-203ENST00000578067 TRAV26-1A0A087WT03 109 aa19.25■□□□□ 0.67
LIMD2-203ENST00000578067 A0A0J9YXY3 114 aa19.25■□□□□ 0.67
LIMD2-203ENST00000578067 RETNQ9HD89 108 aa19.25■□□□□ 0.67
LIMD2-203ENST00000578067 TMEM238LA0A1B0GVL6 79 aa19.25■□□□□ 0.67
LIMD2-203ENST00000578067 A6NJY4 79 aa19.25■□□□□ 0.67
LIMD2-203ENST00000578067 ZFAND6Q6FIF0 208 aa19.25■□□□□ 0.67
LIMD2-203ENST00000578067 A0A1B0GWB2 263 aa19.24■□□□□ 0.67
LIMD2-203ENST00000578067 IGHV3-30P01768 117 aa19.24■□□□□ 0.67
LIMD2-203ENST00000578067 IGHV3-30-5P0DP03 117 aa19.24■□□□□ 0.67
LIMD2-203ENST00000578067 IGLV5-39A0A0G2JS06 123 aa19.24■□□□□ 0.67
LIMD2-203ENST00000578067 NAA38Q9BRA0 125 aaKnown RBP19.24■□□□□ 0.67
LIMD2-203ENST00000578067 HTN3P15516 51 aa19.23■□□□□ 0.67
LIMD2-203ENST00000578067 CCL25O15444 150 aa19.22■□□□□ 0.67
LIMD2-203ENST00000578067 SAMD5Q5TGI4 173 aa19.22■□□□□ 0.67
LIMD2-203ENST00000578067 SMIM1B2RUZ4 78 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms